Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1121 Papaver somniferum HOM05D008218 ORTHO05D010347 1.6e-17 91.7 46 100.0
PSO170G3918 Papaver somniferum HOM05D008218 ORTHO05D010347 1.6e-17 91.7 46 100.0
PSO357G0222 Papaver somniferum HOM05D008218 ORTHO05D010347 6.2e-17 89.7 46 97.8
PSO017G0111 Papaver somniferum HOM05D008218 ORTHO05D010347 6.8e-16 86.3 46 95.7
Lsat_1_v5_gn_2_120021 Lactuca sativa HOM05D009582 ORTHO05D010347 2.4e-13 77.8 46 84.8
TWI36G0894 Tripterygium wilfordii HOM05D008218 ORTHO05D010347 1.6e-12 75.1 48 85.4
RcHm_v2.0_Chr6g0284071 Rosa chinensis HOM05D008218 ORTHO05D010347 6.0e-12 73.2 48 83.3
AL3G18510 Arabidopsis lyrata HOM05D008218 ORTHO05D010347 1.0e-11 72.4 47 76.6
AT3G07230 Arabidopsis thaliana HOM05D008218 ORTHO05D010347 1.7e-11 71.6 47 76.6
Thhalv10021897m.g Eutrema salsugineum HOM05D008218 ORTHO05D010347 3.0e-11 70.9 47 74.5
A03p35150 Brassica napus HOM05D008218 ORTHO05D010347 3.9e-11 70.5 46 73.9
Prupe.8G198600 Prunus persica HOM05D008218 ORTHO05D010347 5.1e-11 70.1 48 79.2
Carub.0003s0676 Capsella rubella HOM05D008218 ORTHO05D010347 1.5e-10 68.6 47 74.5
CARHR081880 Cardamine hirsuta HOM05D008218 ORTHO05D010347 1.5e-10 68.6 47 74.5
Hma1.2p1_0149F.1_g066410 Hydrangea macrophylla HOM05D008218 ORTHO05D010347 1.5e-10 68.6 48 79.2
BcaC05g29851 Brassica carinata HOM05D003583 ORTHO05D004169 1.9e-10 68.2 46 71.7
Gohir.A11G139700 Gossypium hirsutum HOM05D008218 ORTHO05D010347 1.9e-10 68.2 46 78.3
BraA05t22826Z Brassica rapa HOM05D003583 ORTHO05D004169 3.3e-10 67.4 46 71.7
Mapoly0087s0005 Marchantia polymorpha HOM05D008218 ORTHO05D010347 4.3e-10 67.0 48 77.1
Aa31LG5G17820 Aethionema arabicum HOM05D008218 ORTHO05D010347 5.6e-10 66.6 47 72.3
Phvul.008G131550 Phaseolus vulgaris HOM05D008218 ORTHO05D010347 7.3e-10 66.2 48 75.0
FAN15G3347 Fragaria x ananassa HOM05D008218 ORTHO05D010347 1.2e-09 65.5 43 81.4
Pp3c23_15470 Physcomitrium patens HOM05D008218 ORTHO05D010347 1.6e-09 65.1 49 73.5
Pp3c20_8300 Physcomitrium patens HOM05D008218 ORTHO05D010347 2.1e-09 64.7 49 75.5
Solyc06g063400.3 Solanum lycopersicum HOM05D008218 ORTHO05D010347 2.1e-09 64.7 49 73.5
FAN27G2427 Fragaria x ananassa HOM05D008218 ORTHO05D010347 3.6e-09 63.9 43 79.1
Gohir.A07G161100 Gossypium hirsutum HOM05D008218 ORTHO05D010347 3.6e-09 63.9 48 77.1
Gohir.D07G164600 Gossypium hirsutum HOM05D008218 ORTHO05D010347 3.6e-09 63.9 48 77.1
Potri.002G246300 Populus trichocarpa HOM05D008218 ORTHO05D010347 3.6e-09 63.9 48 77.1
Solyc06g063390.3 Solanum lycopersicum HOM05D008218 ORTHO05D010347 3.6e-09 63.9 49 71.4
TWI18G1398 Tripterygium wilfordii HOM05D008218 ORTHO05D010347 3.6e-09 63.9 48 77.1
COL.COLO4_08652 Corchorus olitorius HOM05D008218 ORTHO05D010347 6.2e-09 63.2 48 77.1
TWI75G0809 Tripterygium wilfordii HOM05D008218 ORTHO05D010347 8.1e-09 62.8 48 77.1
CsaV3_3G030050 Cucumis sativus L. HOM05D008218 ORTHO05D010347 1.8e-08 61.6 48 70.8
PGSC0003DMG400007753 Solanum tuberosum HOM05D008218 ORTHO05D010347 2.4e-08 61.2 44 77.3
FAN24G2161 Fragaria x ananassa HOM05D008218 ORTHO05D010347 5.2e-08 60.1 68 57.4
Gohir.D11G145833 Gossypium hirsutum HOM05D008218 ORTHO05D010347 6.8e-08 59.7 48 72.9
Thecc.01G219400 Theobroma cacao HOM05D008218 ORTHO05D010347 6.8e-08 59.7 48 72.9
CiPaw.13G048900 Carya illinoinensis HOM05D008218 ORTHO05D010347 8.9e-08 59.3 48 70.8
THA.LOC104818972 Tarenaya hassleriana HOM05D008218 ORTHO05D010347 1.2e-07 58.9 48 72.9
THA.LOC104822489 Tarenaya hassleriana HOM05D008218 ORTHO05D010347 1.2e-07 58.9 48 72.9
Nn7g36571 Nelumbo nucifera HOM05D008218 ORTHO05D010347 3.4e-07 57.4 48 72.9
Os12g0405700 Oryza sativa ssp. japonica HOM05D008218 ORTHO05D010347 3.4e-07 57.4 49 71.4
Thecc.05G251000 Theobroma cacao HOM05D008218 ORTHO05D010347 3.4e-07 57.4 48 70.8
Lalb_Chr19g0125871 Lupinus albus HOM05D008218 ORTHO05D010347 4.4e-07 57.0 48 70.8
Nitab4.5_0013864g0040 Nicotiana tabacum HOM05D008218 ORTHO05D010347 4.4e-07 57.0 47 70.2
Duzib211G0660 Durio zibethinus HOM05D008218 ORTHO05D010347 7.6e-07 56.2 48 68.8
Gohir.A07G093000 Gossypium hirsutum HOM05D008218 ORTHO05D010347 7.6e-07 56.2 48 70.8
CiPaw.14G038700 Carya illinoinensis HOM05D008218 ORTHO05D010347 9.9e-07 55.8 48 68.8
Manes.12G047600 Manihot esculenta HOM05D008218 ORTHO05D010347 9.9e-07 55.8 48 66.7
EL10Ac7g17908 Beta vulgaris HOM05D008218 ORTHO05D010347 1.3e-06 55.5 47 70.2
CAN.G874.7 Capsicum annuum HOM05D008218 ORTHO05D010347 1.3e-06 55.5 48 70.8
Solyc06g083340.3 Solanum lycopersicum HOM05D008218 ORTHO05D010347 1.3e-06 55.5 48 70.8
PGSC0003DMG400020101 Solanum tuberosum HOM05D008218 ORTHO05D010347 1.3e-06 55.5 48 70.8
Potri.014G191300 Populus trichocarpa HOM05D008218 ORTHO05D010347 1.7e-06 55.1 48 66.7
PGR044G2382 Punica granatum HOM05D008218 ORTHO05D010347 2.2e-06 54.7 48 68.8
Duzib133G0946 Durio zibethinus HOM05D008218 ORTHO05D010347 2.9e-06 54.3 48 68.8
Manes.13G049700 Manihot esculenta HOM05D008218 ORTHO05D010347 2.9e-06 54.3 48 68.8
Hma1.2p1_0226F.1_g095360 Hydrangea macrophylla HOM05D008218 ORTHO05D010347 3.8e-06 53.9 48 68.8
Hund18437 Selenicereus undatus HOM05D008218 ORTHO05D010347 4.9e-06 53.5 48 68.8


User provided reference genes

Program Settings