Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 1.7e-119 432.6 203 100.0
PSO013G0348 Papaver somniferum HOM05D003575 ORTHO05D003587 1.1e-62 243.8 170 67.1
PSO832G3669 Papaver somniferum HOM05D003575 ORTHO05D003587 5.6e-62 241.5 170 66.5
PSO013G0119 Papaver somniferum HOM05D003575 ORTHO05D003587 9.6e-62 240.7 176 65.3
PSO013G0383 Papaver somniferum HOM05D003575 ORTHO05D003587 1.6e-61 240.0 170 65.9
PSO013G0020 Papaver somniferum HOM05D003575 ORTHO05D003587 6.2e-61 238.0 173 65.9
PSO832G1021 Papaver somniferum HOM05D003575 ORTHO05D003587 1.8e-60 236.5 176 62.5
PSO339G1364 Papaver somniferum HOM05D003575 ORTHO05D003587 2.4e-60 236.1 174 64.4
PSO339G4641 Papaver somniferum HOM05D003575 ORTHO05D003587 2.4e-60 236.1 174 64.4
PSO013G0266 Papaver somniferum HOM05D003575 ORTHO05D003587 7.6e-59 231.1 174 64.4
PSO591G0010 Papaver somniferum HOM05D003575 ORTHO05D003587 2.4e-57 226.1 192 59.9
PSO832G1827 Papaver somniferum HOM05D003575 ORTHO05D003587 4.6e-56 221.9 192 59.9
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 3.9e-47 192.2 195 50.3
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 1.9e-46 189.9 195 50.3
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 1.3e-37 160.6 165 51.5
PSO017G1253 Papaver somniferum HOM05D003575 ORTHO05D003587 5.8e-35 151.8 162 47.5
PSO339G3010 Papaver somniferum HOM05D003575 ORTHO05D003587 5.8e-35 151.8 109 64.2
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 7.1e-33 144.8 169 47.3
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 2.5e-30 136.3 190 38.4
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 5.7e-30 135.2 162 43.2
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.4e-28 130.6 170 37.6
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 1.8e-28 130.2 170 40.0
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 6.9e-28 128.3 168 40.5
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.5e-27 127.1 194 35.1
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 1.5e-27 127.1 175 38.3
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 2.6e-27 126.3 194 35.6
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 3.4e-27 125.9 166 39.8
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 4.5e-27 125.6 186 35.5
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 5.9e-27 125.2 175 37.7
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 5.9e-27 125.2 194 35.1
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 7.6e-27 124.8 180 37.2
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 7.6e-27 124.8 182 36.8
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 1.0e-26 124.4 180 37.2
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 1.0e-26 124.4 180 37.2
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 1.0e-26 124.4 165 36.4
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 1.3e-26 124.0 186 35.5
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 1.3e-26 124.0 166 38.0
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 2.9e-26 122.9 169 39.6
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 2.9e-26 122.9 165 37.6
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 3.8e-26 122.5 162 35.8
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 3.8e-26 122.5 188 33.5
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 3.8e-26 122.5 168 39.3
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 5.0e-26 122.1 166 38.6
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 5.0e-26 122.1 167 38.3
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 1.9e-25 120.2 166 38.6
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 5.5e-25 118.6 167 37.1
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 5.5e-25 118.6 167 38.3
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 7.2e-25 118.2 143 38.5
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 7.2e-25 118.2 170 36.5
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 7.2e-25 118.2 167 38.3
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 7.2e-25 118.2 172 36.0
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 7.2e-25 118.2 193 35.8
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 9.3e-25 117.9 169 36.7
Nitab4.5_0004644g0050 Nicotiana tabacum HOM05D003575 ORTHO05D003587 9.3e-25 117.9 191 37.7
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 9.3e-25 117.9 194 37.1
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.2e-24 117.5 190 34.2
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.2e-24 117.5 190 34.2
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 1.2e-24 117.5 173 35.8
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 1.6e-24 117.1 178 37.6
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 1.6e-24 117.1 166 34.3
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 1.6e-24 117.1 144 38.9
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 2.1e-24 116.7 168 33.3
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 3.5e-24 115.9 177 33.9
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 4.6e-24 115.5 194 36.6
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 4.6e-24 115.5 179 35.8
Duzib133G0340 Durio zibethinus HOM05D003575 ORTHO05D003587 1.3e-23 114.0 176 34.7
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 1.8e-23 113.6 143 42.7
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 2.3e-23 113.2 165 38.2
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.3e-23 113.2 170 35.9
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 2.3e-23 113.2 170 34.7
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 2.3e-23 113.2 174 32.8
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 2.3e-23 113.2 166 36.1
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 3.0e-23 112.8 166 37.3
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 3.0e-23 112.8 144 38.2
Nitab4.5_0000622g0080 Nicotiana tabacum HOM05D003575 ORTHO05D003587 5.1e-23 112.1 183 37.2
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 5.1e-23 112.1 204 34.8
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 5.1e-23 112.1 166 34.9
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 6.7e-23 111.7 171 36.3
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 8.7e-23 111.3 166 35.5
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 1.1e-22 110.9 143 36.4
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.5e-22 110.5 143 36.4
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.5e-22 110.5 143 36.4
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 1.5e-22 110.5 170 36.5
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 1.9e-22 110.2 166 34.9
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 1.9e-22 110.2 170 35.3
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 3.3e-22 109.4 168 39.3
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 3.3e-22 109.4 180 34.4
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 3.3e-22 109.4 170 34.7
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.3e-22 109.4 170 34.7
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 3.3e-22 109.4 162 35.8
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 4.3e-22 109.0 167 35.9
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 4.3e-22 109.0 177 33.3
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 5.7e-22 108.6 175 34.9
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 7.4e-22 108.2 144 36.1
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 7.4e-22 108.2 144 36.1
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 7.4e-22 108.2 172 35.5
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 1.3e-21 107.5 173 34.1
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 1.6e-21 107.1 172 35.5
THA.LOC104812766 Tarenaya hassleriana HOM05D003575 ORTHO05D003587 1.1e-20 104.4 172 34.9
RcHm_v2.0_Chr2g0155781 Rosa chinensis HOM05D003575 ORTHO05D003587 1.4e-20 104.0 167 33.5
BolC7t45906H Brassica oleracea HOM05D003575 ORTHO05D003587 4.1e-20 102.4 187 35.3
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 4.1e-20 102.4 167 33.5
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 5.3e-20 102.1 186 32.3
C07p54200 Brassica napus HOM05D003575 ORTHO05D003587 6.9e-20 101.7 187 35.3
BraA03t14662Z Brassica rapa HOM05D003575 ORTHO05D003587 6.9e-20 101.7 187 35.8
FAN14G1012 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.9e-20 101.7 174 32.2
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 6.9e-20 101.7 171 33.3
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 9.0e-20 101.3 174 32.2
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 1.2e-19 100.9 166 34.9
A03p55910 Brassica napus HOM05D003575 ORTHO05D003587 2.0e-19 100.1 187 35.3
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 5.9e-19 98.6 174 35.1
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 5.9e-19 98.6 134 42.5
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 7.7e-19 98.2 207 32.4
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 1.7e-18 97.1 148 32.4
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 2.2e-18 96.7 145 33.8
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 2.2e-18 96.7 175 32.0
BcaC06g32820 Brassica carinata HOM05D003575 ORTHO05D003587 3.8e-18 95.9 172 34.9
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 3.8e-18 95.9 173 31.8
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 6.5e-18 95.1 167 29.3
Carub.0007s1568 Capsella rubella HOM05D003575 ORTHO05D003587 8.5e-18 94.7 149 35.6
MBI15_g44598_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 1.1e-17 94.4 179 35.8
Thhalv10027138m.g Eutrema salsugineum HOM05D003575 ORTHO05D003587 1.4e-17 94.0 172 33.7
TAR624G0842 Trochodendron aralioides HOM05D003575 ORTHO05D003587 1.4e-17 94.0 120 46.7
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 9.4e-17 91.3 149 32.9
Zm00001eb287050 Zea mays HOM05D003575 ORTHO05D003587 1.2e-16 90.9 160 34.4
CAN.G437.6 Capsicum annuum HOM05D003575 ORTHO05D003587 2.1e-16 90.1 125 36.0
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.7e-16 89.7 145 33.1
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 4.6e-16 89.0 144 34.0
FAN25G1379 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.4e-15 87.4 145 32.4
Sp7g23350 Schrenkiella parvula HOM05D003575 ORTHO05D003587 3.0e-15 86.3 168 33.3
Lsat_1_v5_gn_7_97980 Lactuca sativa HOM05D000074 ORTHO05D001293 6.7e-15 85.1 148 30.4
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 8.8e-15 84.7 175 30.9
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.5e-14 83.2 154 31.2
Medtr3g082725 Medicago truncatula HOM05D003575 ORTHO05D003587 3.3e-14 82.8 106 39.6
FAN16G3603 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.3e-14 82.4 177 29.4
HanXRQChr16g0520571 Helianthus annuus HOM05D003575 ORTHO05D003587 5.7e-14 82.0 192 30.2
Peaxi162Scf00802g00028 Petunia axillaris HOM05D003575 ORTHO05D003587 5.7e-14 82.0 194 27.8
Dinv26593 Davidia involucrata HOM05D003575 ORTHO05D003587 9.7e-14 81.3 124 35.5
PGSC0003DMG400017442 Solanum tuberosum HOM05D003575 ORTHO05D003587 9.7e-14 81.3 176 30.7
Hund01541 Selenicereus undatus HOM05D009102 ORTHO05D003587 1.3e-13 80.9 120 41.7
Cc00_g01030 Coffea canephora HOM05D003575 ORTHO05D003587 8.2e-13 78.2 99 38.4
Gohir.A07G087300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.4e-12 77.4 106 38.7
Mapoly0066s0003 Marchantia polymorpha HOM05D040683 ORTHO05D003587 2.4e-12 76.6 152 33.6
Pp3c24_6860 Physcomitrium patens HOM05D003575 ORTHO05D003587 5.3e-12 75.5 141 34.0
MD09G1129100 Malus domestica HOM05D003575 ORTHO05D003587 6.9e-12 75.1 101 37.6
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 6.9e-12 75.1 99 39.4
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 3.4e-11 72.8 121 32.2
Os05g0386400 Oryza sativa ssp. japonica HOM05D003575 ORTHO05D003587 4.5e-11 72.4 186 29.6
Mapoly0021s0099 Marchantia polymorpha HOM05D003575 ORTHO05D003587 1.7e-10 70.5 154 27.9
Zm00001eb264990 Zea mays HOM05D003575 ORTHO05D003587 3.8e-10 69.3 139 31.7
Mapoly0072s0063 Marchantia polymorpha HOM05D040683 ORTHO05D003587 1.4e-09 67.4 142 31.7
ECA236G1196 Erigeron canadensis HOM05D003366 ORTHO05D004045 5.5e-09 65.5 84 40.5
Lsat_1_v5_gn_8_78381 Lactuca sativa HOM05D003575 ORTHO05D003587 9.4e-09 64.7 130 26.9
AagrBONN_evm.TU.Sc2ySwM_344.2846 Anthoceros agrestis HOM05D045034 ORTHO05D003587 1.6e-08 63.9 193 26.4
EL10Ac9g22882 Beta vulgaris HOM05D003575 ORTHO05D003587 2.0e-06 57.0 77 33.8
EL10Ac6g15056 Beta vulgaris HOM05D003575 ORTHO05D003587 2.6e-06 56.6 77 32.5
SEGI_27817 Sequoiadendron giganteum HOM05D003575 ORTHO05D003587 7.4e-06 55.1 99 34.3
MD09G1128900 Malus domestica HOM05D003575 ORTHO05D003587 9.7e-06 54.7 64 39.1


User provided reference genes

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