Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0997 Papaver somniferum HOM05D004945 ORTHO05D005536 7.2e-46 186.8 89 100.0
PSO063G0987 Papaver somniferum HOM05D004945 ORTHO05D005536 1.6e-45 185.7 89 98.9
TAR625G1304 Trochodendron aralioides HOM05D004945 ORTHO05D005536 5.7e-35 150.6 88 77.3
ATR0626G412 Amborella trichopoda HOM05D004945 ORTHO05D005536 1.1e-33 146.4 84 75.0
TAR636G3350 Trochodendron aralioides HOM05D004945 ORTHO05D005536 5.3e-33 144.1 88 73.9
Aqoxy7G02794 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 7.0e-33 143.7 88 70.5
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 9.1e-33 143.3 89 71.9
MD07G1027600 Malus domestica HOM05D004945 ORTHO05D005536 2.0e-32 142.1 88 73.9
CSS0028266 Camellia sinensis var. sinensis HOM05D004945 ORTHO05D005536 2.6e-32 141.7 88 71.6
CDE04G2745 Ceratophyllum demersum HOM05D004945 ORTHO05D005536 3.5e-32 141.4 80 78.8
MD13G1241900 Malus domestica HOM05D004945 ORTHO05D005536 4.5e-32 141.0 88 73.9
PGR142G1282 Punica granatum HOM05D004945 ORTHO05D005536 5.9e-32 140.6 88 71.6
Actinidia38805 Actinidia chinensis HOM05D004945 ORTHO05D005536 1.0e-31 139.8 88 69.3
Prupe.1G075600 Prunus persica HOM05D004945 ORTHO05D005536 1.7e-31 139.0 88 70.5
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 3.8e-31 137.9 88 70.5
DCAR_007670 Daucus carota HOM05D004945 ORTHO05D005536 5.0e-31 137.5 89 67.4
Migut.I01191 Erythranthe guttata HOM05D004945 ORTHO05D005536 8.5e-31 136.7 86 69.8
CiPaw.09G075900 Carya illinoinensis HOM05D004945 ORTHO05D005536 1.1e-30 136.3 88 67.0
Migut.D00890 Erythranthe guttata HOM05D004945 ORTHO05D005536 1.1e-30 136.3 92 67.4
Rhsim08G0249700 Rhododendron simsii HOM05D004945 ORTHO05D005536 1.1e-30 136.3 88 68.2
Haze_06091 Corylus avellana HOM05D004945 ORTHO05D005536 1.9e-30 135.6 88 68.2
TWI63G0641 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 3.2e-30 134.8 88 64.8
Nitab4.5_0003757g0090 Nicotiana tabacum HOM05D004945 ORTHO05D005536 4.2e-30 134.4 80 71.2
Aqoxy1G01195 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 5.5e-30 134.0 88 69.3
Sc12g0011140 Simmondsia chinensis HOM05D004945 ORTHO05D005536 5.5e-30 134.0 89 65.2
Cpa.g.sc95.12 Carica papaya HOM05D004945 ORTHO05D005536 7.2e-30 133.7 88 69.3
unitig_748.g8030 Utricularia gibba HOM05D004945 ORTHO05D005536 7.2e-30 133.7 89 66.3
Cc04_g00230 Coffea canephora HOM05D004945 ORTHO05D005536 9.4e-30 133.3 88 69.3
Sabra18G0116400 Salix brachista HOM05D004945 ORTHO05D005536 1.2e-29 132.9 88 69.3
Sed0015624 Sechium edule HOM05D004945 ORTHO05D005536 1.2e-29 132.9 88 67.0
PGSC0003DMG400026503 Solanum tuberosum HOM05D004945 ORTHO05D005536 1.2e-29 132.9 89 66.3
CiPaw.10G063900 Carya illinoinensis HOM05D004945 ORTHO05D005536 1.6e-29 132.5 88 64.8
RcHm_v2.0_Chr4g0399651 Rosa chinensis HOM05D004945 ORTHO05D005536 2.7e-29 131.7 85 70.6
ClCG06G013580 Citrullus lanatus HOM05D004945 ORTHO05D005536 3.6e-29 131.3 88 65.9
FvH4_4g07310 Fragaria vesca HOM05D004945 ORTHO05D005536 3.6e-29 131.3 88 71.6
Potri.018G142500 Populus trichocarpa HOM05D004945 ORTHO05D005536 3.6e-29 131.3 88 67.0
Sed0005101 Sechium edule HOM05D004945 ORTHO05D005536 3.6e-29 131.3 88 65.9
MELO3C017430.2 Cucumis melo HOM05D004945 ORTHO05D005536 4.7e-29 131.0 88 67.0
TWI34G0510 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 4.7e-29 131.0 88 64.8
Ca_02105_v3 Cicer arietinum L. HOM05D004945 ORTHO05D005536 6.1e-29 130.6 88 65.9
Glyma.15G165900 Glycine max HOM05D004945 ORTHO05D005536 6.1e-29 130.6 88 62.5
Thecc.09G185900 Theobroma cacao HOM05D004945 ORTHO05D005536 6.1e-29 130.6 88 67.0
Manes.06G020000 Manihot esculenta HOM05D004945 ORTHO05D005536 8.0e-29 130.2 88 65.9
unitig_32.g11008 Utricularia gibba HOM05D004945 ORTHO05D005536 8.0e-29 130.2 87 64.4
CAN.G308.14 Capsicum annuum HOM05D004945 ORTHO05D005536 1.0e-28 129.8 80 70.0
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 1.0e-28 129.8 88 67.0
Glyma.09G059600 Glycine max HOM05D004945 ORTHO05D005536 1.8e-28 129.0 88 61.4
Potri.006G075600 Populus trichocarpa HOM05D004945 ORTHO05D005536 1.8e-28 129.0 88 64.8
Sc15g0001010 Simmondsia chinensis HOM05D004945 ORTHO05D005536 1.8e-28 129.0 89 60.7
Solyc06g063310.2 Solanum lycopersicum HOM05D004945 ORTHO05D005536 1.8e-28 129.0 89 65.2
Sopen06g022780 Solanum pennellii HOM05D004945 ORTHO05D005536 1.8e-28 129.0 89 65.2
Duzib150G0603 Durio zibethinus HOM05D004945 ORTHO05D005536 2.3e-28 128.6 88 63.6
FAN07G0945 Fragaria x ananassa HOM05D004945 ORTHO05D005536 3.0e-28 128.3 88 70.5
Atru.chr7.757 Acer truncatum HOM05D004945 ORTHO05D005536 4.0e-28 127.9 88 65.9
Atru.chr7.779 Acer truncatum HOM05D004945 ORTHO05D005536 4.0e-28 127.9 88 65.9
CANSAT11G0762 Cannabis sativa HOM05D004945 ORTHO05D005536 4.0e-28 127.9 88 65.9
COL.COLO4_08559 Corchorus olitorius HOM05D004945 ORTHO05D005536 5.2e-28 127.5 88 63.6
TPR.G7575 Trifolium pratense HOM05D004945 ORTHO05D005536 5.2e-28 127.5 88 63.6
QL11p014429 Quercus lobata HOM05D004945 ORTHO05D005536 6.7e-28 127.1 88 63.6
QL11p013920 Quercus lobata HOM05D004945 ORTHO05D005536 8.8e-28 126.7 88 62.5
Ciclev10010043m.g Citrus clementina HOM05D004945 ORTHO05D005536 1.2e-27 126.3 88 62.5
COL.COLO4_22793 Corchorus olitorius HOM05D004945 ORTHO05D005536 1.2e-27 126.3 88 62.5
Gorai.004G025200 Gossypium raimondii HOM05D004945 ORTHO05D005536 1.5e-27 125.9 88 65.9
BcaB03g12628 Brassica carinata HOM05D004945 ORTHO05D005536 3.3e-27 124.8 88 65.9
Psat1g144160 Pisum sativum HOM05D004945 ORTHO05D005536 3.3e-27 124.8 88 63.6
THA.LOC104803956 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 3.3e-27 124.8 88 62.5
THA.LOC104803979 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 3.3e-27 124.8 88 62.5
MD10G1108200 Malus domestica HOM05D004945 ORTHO05D005536 5.7e-27 124.0 84 66.7
Eucgr.C00118 Eucalyptus grandis HOM05D004945 ORTHO05D005536 7.5e-27 123.6 92 60.9
Gohir.D08G028100 Gossypium hirsutum HOM05D004945 ORTHO05D005536 7.5e-27 123.6 88 64.8
THA.LOC104820006 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 7.5e-27 123.6 88 61.4
Gohir.A13G208500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 9.7e-27 123.2 88 61.4
Gohir.D13G212900 Gossypium hirsutum HOM05D004945 ORTHO05D005536 9.7e-27 123.2 88 62.5
Gohir.D13G212800 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.3e-26 122.9 88 61.4
Gorai.013G243200 Gossypium raimondii HOM05D004945 ORTHO05D005536 1.3e-26 122.9 88 61.4
BcaC01g01207 Brassica carinata HOM05D004945 ORTHO05D005536 1.7e-26 122.5 88 64.8
A08p19460 Brassica napus HOM05D004945 ORTHO05D005536 1.7e-26 122.5 88 64.8
C03p88960 Brassica napus HOM05D004945 ORTHO05D005536 1.7e-26 122.5 88 64.8
BolC3t21206H Brassica oleracea HOM05D004945 ORTHO05D005536 1.7e-26 122.5 88 64.8
BraA08t33908Z Brassica rapa HOM05D004945 ORTHO05D005536 1.7e-26 122.5 88 64.8
Duzib150G1578 Durio zibethinus HOM05D004945 ORTHO05D005536 1.7e-26 122.5 88 60.2
Gohir.A13G208400 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.7e-26 122.5 88 61.4
Lalb_Chr11g0074741 Lupinus albus HOM05D004945 ORTHO05D005536 1.7e-26 122.5 89 59.6
Ah.13g075140 Amaranthus hybridus HOM05D004945 ORTHO05D005536 3.7e-26 121.3 84 64.3
CARHR237930 Cardamine hirsuta HOM05D004945 ORTHO05D005536 6.3e-26 120.6 88 63.6
Lj6g0012502 Lotus japonicus HOM05D004945 ORTHO05D005536 8.3e-26 120.2 88 58.0
SHI03058 Sapria himalayana HOM05D004945 ORTHO05D005536 1.4e-25 119.4 87 60.9
Medtr2g037990 Medicago truncatula HOM05D004945 ORTHO05D005536 1.8e-25 119.0 88 61.4
Sp7g27810 Schrenkiella parvula HOM05D004945 ORTHO05D005536 1.8e-25 119.0 88 60.2
Psat1g144120 Pisum sativum HOM05D004945 ORTHO05D005536 2.4e-25 118.6 88 62.5
A03p59370 Brassica napus HOM05D004945 ORTHO05D005536 3.1e-25 118.2 88 63.6
C07p57400 Brassica napus HOM05D004945 ORTHO05D005536 3.1e-25 118.2 88 63.6
BolC7t46209H Brassica oleracea HOM05D004945 ORTHO05D005536 3.1e-25 118.2 88 63.6
BraA03t14994Z Brassica rapa HOM05D004945 ORTHO05D005536 3.1e-25 118.2 88 63.6
THA.LOC104814658 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 3.1e-25 118.2 88 61.4
Ah.04g153390 Amaranthus hybridus HOM05D004945 ORTHO05D005536 5.3e-25 117.5 84 61.9
Thhalv10026677m.g Eutrema salsugineum HOM05D004945 ORTHO05D005536 7.0e-25 117.1 88 62.5
Phvul.007G156600 Phaseolus vulgaris HOM05D004945 ORTHO05D005536 7.0e-25 117.1 88 56.8
BcaNung00508 Brassica carinata HOM05D004945 ORTHO05D005536 9.1e-25 116.7 88 62.5
Carub.0007s1064 Capsella rubella HOM05D004945 ORTHO05D005536 9.1e-25 116.7 88 60.2
Gohir.A08G017500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.6e-24 115.9 88 60.2
Aa31LG2G20550 Aethionema arabicum HOM05D004945 ORTHO05D005536 2.0e-24 115.5 88 60.2
arahy.Tifrunner.gnm1.ann1.M8DR4H Arachis hypogaea HOM05D004945 ORTHO05D005536 2.0e-24 115.5 96 59.4
Lsat_1_v5_gn_1_39460 Lactuca sativa HOM05D004945 ORTHO05D005536 2.0e-24 115.5 88 58.0
arahy.Tifrunner.gnm1.ann1.ZYC9F0 Arachis hypogaea HOM05D004945 ORTHO05D005536 2.7e-24 115.2 87 59.8
AUR62030327 Chenopodium quinoa HOM05D004945 ORTHO05D005536 2.7e-24 115.2 85 60.0
AL7G22230 Arabidopsis lyrata HOM05D004945 ORTHO05D005536 3.5e-24 114.8 88 59.1
EL10Ac3g07227 Beta vulgaris HOM05D004945 ORTHO05D005536 4.5e-24 114.4 84 58.3
AUR62018340 Chenopodium quinoa HOM05D004945 ORTHO05D005536 4.5e-24 114.4 84 59.5
AUR62031980 Chenopodium quinoa HOM05D004945 ORTHO05D005536 4.5e-24 114.4 84 59.5
AUR62044702 Chenopodium quinoa HOM05D004945 ORTHO05D005536 4.5e-24 114.4 84 59.5
AUR62044703 Chenopodium quinoa HOM05D004945 ORTHO05D005536 4.5e-24 114.4 84 59.5
QL11p013931 Quercus lobata HOM05D004945 ORTHO05D005536 4.5e-24 114.4 88 61.4
QL11p014451 Quercus lobata HOM05D004945 ORTHO05D005536 5.9e-24 114.0 88 61.4
AT4G30010 Arabidopsis thaliana HOM05D004945 ORTHO05D005536 1.3e-23 112.8 88 56.8
AUR62023991 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.7e-23 112.5 84 58.3
ECA247G2100 Erigeron canadensis HOM05D004945 ORTHO05D005536 2.1e-21 105.5 89 55.1
A01p08110 Brassica napus HOM05D004945 ORTHO05D005536 4.0e-20 101.3 74 59.5
THA.LOC104811777 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 3.4e-19 98.2 89 48.3
BcaB03g15243 Brassica carinata HOM05D004945 ORTHO05D005536 1.7e-18 95.9 75 58.7
Os02g0175800 Oryza sativa ssp. japonica HOM05D004945 ORTHO05D005536 2.4e-17 92.0 83 50.6
THA.LOC109116878 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 2.0e-16 89.0 59 64.4
Dinv25512 Davidia involucrata HOM05D004945 ORTHO05D005536 3.5e-16 88.2 62 62.9
Nitab4.5_0000617g0120 Nicotiana tabacum HOM05D004945 ORTHO05D005536 8.6e-15 83.6 66 56.1
GSVIVG01010862001 Vitis vinifera HOM05D004945 ORTHO05D005536 1.5e-14 82.8 64 56.2
Nitab4.5_0006750g0010 Nicotiana tabacum HOM05D004945 ORTHO05D005536 4.2e-14 81.3 57 57.9
HanXRQChr15g0497481 Helianthus annuus HOM05D004945 ORTHO05D005536 5.5e-14 80.9 60 55.0
PGSC0003DMG400028757 Solanum tuberosum HOM05D004945 ORTHO05D005536 2.8e-13 78.6 54 63.0
Nn8g40786 Nelumbo nucifera HOM05D004945 ORTHO05D005536 1.4e-12 76.3 43 69.8
SMO361G0023 Selaginella moellendorffii HOM05D004945 ORTHO05D005536 1.5e-11 72.8 83 39.8
Nitab4.5_0002354g0060 Nicotiana tabacum HOM05D004945 ORTHO05D005536 1.7e-10 69.3 45 60.0
BcaC09g51779 Brassica carinata HOM05D004945 ORTHO05D005536 8.3e-10 67.0 71 45.1
BcaNung06654 Brassica carinata HOM05D004945 ORTHO05D005536 8.3e-10 67.0 71 45.1
AagrBONN_evm.TU.Sc2ySwM_228.1937 Anthoceros agrestis HOM05D004945 ORTHO05D005536 7.0e-09 63.9 76 40.8
Mapoly0011s0061 Marchantia polymorpha HOM05D004945 ORTHO05D005536 1.6e-08 62.8 82 40.2
Dinv24096 Davidia involucrata HOM05D019947 ORTHO05D005536 2.0e-08 62.4 43 58.1
Dinv44937 Davidia involucrata HOM05D004945 ORTHO05D005536 2.0e-08 62.4 43 58.1
CBR_g50842 Chara braunii HOM05D004945 ORTHO05D005536 2.7e-08 62.0 78 38.5
Pp3c5_15280 Physcomitrium patens HOM05D004945 ORTHO05D005536 5.9e-08 60.8 85 35.3
Pp3c25_5460 Physcomitrium patens HOM05D004945 ORTHO05D005536 7.8e-08 60.5 79 41.8
Pp3c25_5480 Physcomitrium patens HOM05D004945 ORTHO05D005536 7.8e-08 60.5 79 41.8
arahy.Tifrunner.gnm1.ann1.2FH55K Arachis hypogaea HOM05D004945 ORTHO05D005536 1.3e-07 59.7 57 49.1
arahy.Tifrunner.gnm1.ann1.U71V3Q Arachis hypogaea HOM05D004945 ORTHO05D005536 1.3e-07 59.7 57 49.1
AagrBONN_evm.TU.Sc2ySwM_344.4974 Anthoceros agrestis HOM05D004945 ORTHO05D005536 2.3e-07 58.9 83 38.6
Pp3c5_15650 Physcomitrium patens HOM05D004945 ORTHO05D005536 6.6e-07 57.4 86 37.2
MCO09G227 Micromonas commoda HOM05D004945 ORTHO05D005536 5.6e-06 54.3 80 37.5
Oeu001819.1 Olea europaea HOM05D004945 ORTHO05D005536 7.3e-06 53.9 73 37.0


User provided reference genes

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