Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0973 Papaver somniferum HOM05D006671 ORTHO05D008637 7.1e-312 1073.2 521 100.0
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 2.8e-243 845.1 488 86.3
TAR623G0926 Trochodendron aralioides HOM05D006671 ORTHO05D008637 7.2e-162 574.7 483 62.1
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 1.2e-161 573.9 478 61.9
CSS0038482 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 2.7e-161 572.8 476 61.8
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 3.9e-160 568.9 472 61.9
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 9.1e-157 557.8 478 59.2
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 3.8e-155 552.4 479 60.1
COL.COLO4_26801 Corchorus olitorius HOM05D006671 ORTHO05D008637 1.6e-153 547.0 479 58.7
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 3.6e-153 545.8 489 60.3
vmacro18708 Vaccinium macrocarpon HOM05D006671 ORTHO05D008637 3.6e-153 545.8 475 57.9
Rhsim08G0246200 Rhododendron simsii HOM05D006671 ORTHO05D008637 1.0e-152 544.3 501 55.5
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 1.0e-152 544.3 476 56.9
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 1.4e-152 543.9 471 59.7
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 3.0e-152 542.7 481 58.8
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 2.8e-150 536.2 474 58.0
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 7.0e-149 531.6 475 58.3
Gohir.D13G119900 Gossypium hirsutum HOM05D006671 ORTHO05D008637 2.6e-148 529.6 479 57.6
Prupe.3G029600 Prunus persica HOM05D006671 ORTHO05D008637 2.6e-148 529.6 479 58.2
Gorai.013G134300 Gossypium raimondii HOM05D006671 ORTHO05D008637 1.3e-147 527.3 485 57.1
MD09G1171100 Malus domestica HOM05D006671 ORTHO05D008637 2.9e-147 526.2 478 58.4
Sopen12g024210 Solanum pennellii HOM05D006671 ORTHO05D008637 3.8e-147 525.8 493 55.2
Lalb_Chr10g0101031 Lupinus albus HOM05D006671 ORTHO05D008637 1.1e-146 524.2 483 55.7
Actinidia24409 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.9e-146 523.5 474 57.4
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 2.5e-146 523.1 476 56.9
Manes.11G010600 Manihot esculenta HOM05D006671 ORTHO05D008637 2.5e-146 523.1 481 58.4
HanXRQChr10g0311581 Helianthus annuus HOM05D006671 ORTHO05D008637 4.2e-146 522.3 472 56.8
Solyc12g055740.2 Solanum lycopersicum HOM05D006671 ORTHO05D008637 5.5e-146 521.9 493 55.0
TPR.G26443 Trifolium pratense HOM05D006671 ORTHO05D008637 7.2e-146 521.5 479 57.0
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 7.2e-146 521.5 474 58.0
PGSC0003DMG402028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 1.2e-145 520.8 493 55.4
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 2.1e-145 520.0 488 55.5
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 6.1e-145 518.5 526 53.2
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 8.0e-145 518.1 483 55.5
Cc04_g00530 Coffea canephora HOM05D006671 ORTHO05D008637 1.8e-144 516.9 475 55.8
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 3.0e-144 516.2 479 56.6
Thhalv10011378m.g Eutrema salsugineum HOM05D006671 ORTHO05D008637 3.9e-144 515.8 475 56.2
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 6.7e-144 515.0 474 53.6
Sp1g40250 Schrenkiella parvula HOM05D006671 ORTHO05D008637 6.7e-144 515.0 475 55.8
BcaC01g01410 Brassica carinata HOM05D006671 ORTHO05D008637 8.8e-144 514.6 475 56.2
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 8.8e-144 514.6 478 55.2
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 1.1e-143 514.2 488 53.5
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 2.0e-143 513.5 473 55.4
C03p91740 Brassica napus HOM05D006671 ORTHO05D008637 3.3e-143 512.7 475 56.0
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 4.4e-143 512.3 507 55.0
RcHm_v2.0_Chr2g0148251 Rosa chinensis HOM05D006671 ORTHO05D008637 1.7e-142 510.4 478 58.2
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 2.2e-142 510.0 474 55.7
BcaB04g17063 Brassica carinata HOM05D006671 ORTHO05D008637 8.2e-142 508.1 475 55.6
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 8.2e-142 508.1 484 55.6
AT1G53710 Arabidopsis thaliana HOM05D006671 ORTHO05D008637 1.4e-141 507.3 474 54.9
BolC3t21495H Brassica oleracea HOM05D006671 ORTHO05D008637 1.4e-141 507.3 475 55.4
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 1.4e-141 507.3 475 55.4
SalBow7G2314 Salvia bowleyana HOM05D006671 ORTHO05D008637 1.4e-141 507.3 475 55.2
CARHR044010 Cardamine hirsuta HOM05D006671 ORTHO05D008637 1.8e-141 506.9 474 54.0
Medtr8g023620 Medicago truncatula HOM05D006671 ORTHO05D008637 2.0e-140 503.4 480 55.0
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 2.0e-140 503.4 472 54.9
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 3.5e-140 502.7 478 55.0
AL1G62410 Arabidopsis lyrata HOM05D006671 ORTHO05D008637 5.9e-140 501.9 478 54.6
PGSC0003DMG401028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 1.7e-139 500.4 492 53.9
Carub.0001s4299 Capsella rubella HOM05D006671 ORTHO05D008637 2.2e-139 500.0 475 54.3
MSTRG.9549 Avicennia marina HOM05D006671 ORTHO05D008637 2.9e-139 499.6 472 55.9
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 2.5e-138 496.5 478 54.4
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 4.2e-138 495.7 490 52.7
Cpa.g.sc229.10 Carica papaya HOM05D006671 ORTHO05D008637 7.2e-138 495.0 477 55.3
Haze_14039 Corylus avellana HOM05D006671 ORTHO05D008637 1.6e-137 493.8 546 51.5
CDE06G0010 Ceratophyllum demersum HOM05D006671 ORTHO05D008637 2.1e-137 493.4 474 54.6
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 3.6e-137 492.7 442 56.6
EL10Ac7g18235 Beta vulgaris HOM05D006671 ORTHO05D008637 1.0e-136 491.1 473 55.0
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 1.0e-136 491.1 491 51.9
Lsat_1_v5_gn_5_137600 Lactuca sativa HOM05D006671 ORTHO05D008637 2.0e-135 486.9 473 55.8
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 4.4e-135 485.7 430 59.5
DCAR_007665 Daucus carota HOM05D006671 ORTHO05D008637 6.3e-134 481.9 497 52.3
PGR119G0898 Punica granatum HOM05D006671 ORTHO05D008637 6.3e-134 481.9 481 52.6
FvH4_6g36250 Fragaria vesca HOM05D006671 ORTHO05D008637 1.8e-133 480.3 475 53.7
SEGI_35568 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 9.1e-133 478.0 482 51.9
FAN14G1234 Fragaria x ananassa HOM05D006671 ORTHO05D008637 3.5e-132 476.1 475 53.3
SGA_v2.0_scaffold4G02101 Striga asiatica HOM05D006671 ORTHO05D008637 1.2e-129 467.6 480 51.7
Dinv20369 Davidia involucrata HOM05D006671 ORTHO05D008637 3.6e-129 466.1 402 59.2
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 4.4e-127 459.1 697 39.9
FAN09G2187 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.4e-125 454.1 476 52.5
AUR62001377 Chenopodium quinoa HOM05D006671 ORTHO05D008637 7.7e-124 448.4 425 54.6
unitig_699.g19656 Utricularia gibba HOM05D006671 ORTHO05D001254 8.9e-120 434.9 483 48.2
AUR62044064 Chenopodium quinoa HOM05D006671 ORTHO05D008637 5.7e-119 432.2 413 53.5
Nitab4.5_0003469g0010 Nicotiana tabacum HOM05D006671 ORTHO05D008637 9.8e-119 431.4 503 48.1
Ah.08g217540 Amaranthus hybridus HOM05D006671 ORTHO05D008637 8.3e-118 428.3 474 50.0
FAN14G2634 Fragaria x ananassa HOM05D006671 ORTHO05D008637 4.1e-117 426.0 475 50.3
Pp3c21_8010 Physcomitrium patens HOM05D006671 ORTHO05D008637 4.4e-111 406.0 521 42.8
SMO347G0345 Selaginella moellendorffii HOM05D006671 ORTHO05D008637 2.0e-108 397.1 497 43.1
Actinidia33812 Actinidia chinensis HOM05D006671 ORTHO05D008637 6.0e-108 395.6 465 48.4
Nitab4.5_0000357g0220 Nicotiana tabacum HOM05D006671 ORTHO05D008637 1.6e-105 387.5 491 47.0
AagrBONN_evm.TU.Sc2ySwM_362.1979 Anthoceros agrestis HOM05D006671 ORTHO05D008637 1.5e-103 380.9 474 43.9
Hma1.2p1_1104F.1_g257490 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 1.6e-97 360.9 256 67.6
VMungo0331G0057 Vigna mungo HOM05D006671 ORTHO05D008637 2.0e-95 354.0 333 53.8
QL03p047059 Quercus lobata HOM05D006671 ORTHO05D008637 6.4e-94 349.0 264 64.4
Peaxi162Scf00177g00616 Petunia axillaris HOM05D006671 ORTHO05D008637 7.8e-84 315.5 485 41.2
Ca_23471_v3 Cicer arietinum L. HOM05D006671 ORTHO05D008637 3.1e-80 303.5 284 54.6
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 5.4e-77 292.7 295 52.9
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 1.3e-73 281.6 472 34.7
Gohir.A13G116750 Gossypium hirsutum HOM05D006671 ORTHO05D008637 1.3e-65 255.0 202 60.4
FAN02G1271 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.6e-63 247.3 352 45.2
THA.LOC104803433 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 1.9e-61 241.1 177 67.2
QL03p047068 Quercus lobata HOM05D006671 ORTHO05D008637 2.0e-55 221.1 187 65.2
Hma1.2p1_1104F.1_g257500 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 1.3e-54 218.4 171 64.3
BcaNung02916 Brassica carinata HOM05D006671 ORTHO05D008637 1.1e-53 215.3 426 35.4
Oeu006761.2 Olea europaea HOM05D006671 ORTHO05D008637 1.1e-50 205.3 191 56.0
ATR0006G018 Amborella trichopoda HOM05D006671 ORTHO05D008637 1.9e-50 204.5 181 58.0
SEGI_04788 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 2.2e-49 201.1 189 56.6
Gohir.A13G116801 Gossypium hirsutum HOM05D006671 ORTHO05D008637 5.0e-46 189.9 155 65.2
MCO09G741 Micromonas commoda HOM05D006671 ORTHO05D008637 2.0e-42 177.9 449 30.1
MD17G1156100 Malus domestica HOM05D006671 ORTHO05D008637 4.8e-41 173.3 379 36.1
Actinidia21851 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.0e-38 165.6 159 56.0
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 6.1e-36 156.4 318 34.3
Hund05690 Selenicereus undatus HOM05D006671 ORTHO05D008637 1.1e-34 152.1 123 64.2
Actinidia21852 Actinidia chinensis HOM05D006671 ORTHO05D008637 2.6e-31 141.0 121 58.7
Cfa022026 Carpinus fangiana HOM05D002393 ORTHO05D123579 2.1e-20 104.8 511 24.9
Lsat_1_v5_gn_2_122021 Lactuca sativa HOM05D006671 ORTHO05D008637 6.1e-20 103.2 134 45.5
BcaC09g48416 Brassica carinata HOM05D006671 ORTHO05D027459 1.3e-14 85.5 84 53.6
C01p50010 Brassica napus HOM05D010519 ORTHO05D027459 1.3e-14 85.5 84 53.6
BolC1t04958H Brassica oleracea HOM05D010519 ORTHO05D027459 1.3e-14 85.5 84 53.6
TPR.G32489 Trifolium pratense HOM05D008167 ORTHO05D010296 3.4e-10 70.9 333 25.5
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 4.9e-09 67.0 340 22.1
Lsat_1_v5_gn_1_119700 Lactuca sativa HOM05D006671 ORTHO05D011576 4.9e-09 67.0 74 47.3
Lsat_1_v5_gn_2_91241 Lactuca sativa HOM05D006671 ORTHO05D011576 6.3e-09 66.6 74 50.0
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 5.4e-08 63.5 432 22.0
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 5.4e-08 63.5 429 21.9
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 5.4e-08 63.5 366 21.6
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 7.0e-08 63.2 398 21.6
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 9.2e-08 62.8 355 21.4
HanXRQChr04g0111501 Helianthus annuus HOM05D008167 ORTHO05D010296 3.5e-07 60.8 412 22.1
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 4.5e-07 60.5 207 26.1
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 1.0e-06 59.3 361 20.8
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 1.7e-06 58.5 351 21.9
MBI02_g36661_MAGBIO Magnolia biondii HOM05D008167 ORTHO05D010296 2.3e-06 58.2 345 20.3


User provided reference genes

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