Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 1.4e-218 762.7 392 100.0
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 1.0e-197 693.3 392 93.1
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 2.8e-195 685.3 384 92.2
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 5.4e-186 654.4 385 89.9
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 2.4e-146 522.7 383 75.5
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 6.2e-134 481.5 388 69.8
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 4.9e-131 471.9 388 68.8
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 5.0e-91 339.0 387 56.3
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 4.5e-76 289.3 383 49.6
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 1.3e-70 271.2 236 66.9
PSO759G0004 Papaver somniferum HOM05D004787 ORTHO05D302987 1.2e-63 248.1 367 46.0
PSO081G0156 Papaver somniferum HOM05D004787 ORTHO05D304832 8.9e-56 221.9 182 68.1
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 5.7e-55 219.2 353 44.8
PSO541G6299 Papaver somniferum HOM05D004787 ORTHO05D302708 8.0e-49 198.7 334 43.7
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 7.5e-47 192.2 328 44.2
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 1.3e-46 191.4 360 43.1
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 8.9e-40 168.7 228 50.4
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-34 151.8 390 37.2
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 3.5e-28 130.2 183 47.0
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 3.3e-26 123.6 80 85.0
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 2.8e-25 120.6 152 53.9
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 2.4e-24 117.5 178 45.5
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 2.1e-20 104.4 292 31.8
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 3.9e-19 100.1 155 46.5
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 3.9e-19 100.1 155 46.5
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 6.6e-19 99.4 326 29.8
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 8.7e-19 99.0 79 75.9
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 8.7e-19 99.0 356 30.3
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 1.1e-18 98.6 325 30.2
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-18 98.6 357 32.2
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 1.9e-18 97.8 326 30.4
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 1.9e-18 97.8 327 30.6
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 1.9e-18 97.8 357 31.9
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 4.3e-18 96.7 327 30.6
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 5.6e-18 96.3 313 30.0
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 7.3e-18 95.9 312 29.2
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 7.3e-18 95.9 312 29.8
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 9.6e-18 95.5 294 31.0
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 9.6e-18 95.5 327 30.0
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 9.6e-18 95.5 361 29.1
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 9.6e-18 95.5 337 28.5
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 1.6e-17 94.7 312 29.2
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 2.1e-17 94.4 326 30.1
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 2.1e-17 94.4 326 29.8
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 2.8e-17 94.0 356 30.3
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 3.6e-17 93.6 326 29.8
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 3.6e-17 93.6 326 28.8
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 3.6e-17 93.6 326 30.4
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 4.8e-17 93.2 344 28.5
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 4.8e-17 93.2 344 28.5
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 4.8e-17 93.2 326 30.1
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 6.2e-17 92.8 327 29.7
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 8.1e-17 92.4 312 28.2
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 8.1e-17 92.4 326 29.4
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 8.1e-17 92.4 310 29.7
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 1.1e-16 92.0 326 29.4
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 1.4e-16 91.7 311 28.0
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 1.4e-16 91.7 356 28.9
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 1.4e-16 91.7 356 28.9
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 1.4e-16 91.7 327 29.4
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 1.4e-16 91.7 326 29.1
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 1.8e-16 91.3 245 33.1
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 1.8e-16 91.3 327 30.3
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 1.8e-16 91.3 340 28.5
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 1.8e-16 91.3 326 29.1
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 1.8e-16 91.3 326 29.1
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 2.4e-16 90.9 298 30.9
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 2.4e-16 90.9 356 28.7
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 3.1e-16 90.5 312 28.8
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 3.1e-16 90.5 327 29.4
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 3.1e-16 90.5 356 28.7
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 3.1e-16 90.5 326 29.8
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 4.0e-16 90.1 332 28.9
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 5.3e-16 89.7 358 27.7
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 6.9e-16 89.4 327 29.1
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 6.9e-16 89.4 376 28.5
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 1.5e-15 88.2 337 28.5
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 1.5e-15 88.2 332 28.6
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 2.6e-15 87.4 303 31.0
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 3.4e-15 87.0 330 29.1
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 3.4e-15 87.0 300 30.3
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 5.8e-15 86.3 354 26.6
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 5.8e-15 86.3 327 27.5
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 7.6e-15 85.9 331 27.8
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 9.9e-15 85.5 358 27.9
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 9.9e-15 85.5 305 29.5
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 9.9e-15 85.5 327 28.4
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 1.7e-14 84.7 357 28.6
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 1.7e-14 84.7 321 26.8
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 1.7e-14 84.7 326 28.2
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 1.7e-14 84.7 305 30.5
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 2.2e-14 84.3 332 28.0
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 2.2e-14 84.3 326 27.9
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 2.2e-14 84.3 245 31.8
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 2.2e-14 84.3 308 28.6
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 2.9e-14 84.0 327 26.9
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 4.9e-14 83.2 322 27.3
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 4.9e-14 83.2 324 28.7
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 6.4e-14 82.8 356 28.1
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 8.4e-14 82.4 314 28.7
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 1.1e-13 82.0 356 28.4
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.1e-13 82.0 321 26.8
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.1e-13 82.0 321 26.5
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 1.1e-13 82.0 249 31.7
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 1.1e-13 82.0 324 28.4
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 1.1e-13 82.0 299 30.4
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 1.1e-13 82.0 299 30.4
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 2.4e-13 80.9 344 28.2
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 4.2e-13 80.1 344 28.2
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 4.2e-13 80.1 356 28.4
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 5.4e-13 79.7 344 27.9
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 7.1e-13 79.3 267 27.3
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 1.6e-12 78.2 392 27.8
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 1.6e-12 78.2 244 29.9
PSO832G3890 Papaver somniferum HOM05D000071 ORTHO05D003524 2.1e-12 77.8 73 58.9
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 2.7e-12 77.4 268 28.0
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.7e-12 77.4 340 27.1
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 3.5e-12 77.0 223 30.9
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 3.5e-12 77.0 272 27.6
CAN.G809.96 Capsicum annuum HOM05D004787 ORTHO05D006972 6.0e-12 76.3 296 27.7
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 1.0e-11 75.5 268 28.7
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 1.3e-11 75.1 296 28.0
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 1.3e-11 75.1 260 28.8
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 1.8e-11 74.7 319 27.3
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 2.3e-11 74.3 189 33.9
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 2.3e-11 74.3 214 31.3
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 3.0e-11 73.9 315 26.7
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 5.1e-11 73.2 316 27.8
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 1.5e-10 71.6 334 26.3
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 3.3e-10 70.5 236 30.9
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 1.6e-09 68.2 273 25.6
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 9.0e-08 62.4 188 31.9
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 9.9e-07 58.9 144 39.6
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 9.9e-07 58.9 109 45.0
CDE02G3895 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 2.9e-06 57.4 257 26.1


User provided reference genes

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