Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0850 Papaver somniferum HOM05D003497 ORTHO05D003964 1.9e-164 582.4 286 100.0
PSO017G7033 Papaver somniferum HOM05D003497 ORTHO05D003964 2.3e-162 575.5 286 98.6
PSO017G1612 Papaver somniferum HOM05D003497 ORTHO05D003964 3.6e-46 189.5 281 42.7
Nn6g34530 Nelumbo nucifera HOM05D003497 ORTHO05D003964 9.7e-44 181.4 274 42.7
Nn3g19312 Nelumbo nucifera HOM05D003497 ORTHO05D003964 8.2e-43 178.3 272 42.6
PSO170G5054 Papaver somniferum HOM05D003497 ORTHO05D003964 8.2e-43 178.3 279 42.3
TAR381G0023 Trochodendron aralioides HOM05D003497 ORTHO05D003964 5.3e-42 175.6 265 39.6
TAR625G0452 Trochodendron aralioides HOM05D003497 ORTHO05D003964 1.2e-41 174.5 249 44.2
Haze_10291 Corylus avellana HOM05D003497 ORTHO05D003964 1.5e-41 174.1 279 38.4
CiPaw.06G163900 Carya illinoinensis HOM05D003497 ORTHO05D003964 3.4e-41 172.9 271 38.4
QL11p029247 Quercus lobata HOM05D003497 ORTHO05D003964 5.9e-41 172.2 253 38.3
Cfa004695 Carpinus fangiana HOM05D003497 ORTHO05D003964 2.9e-40 169.9 278 37.4
Manes.07G056700 Manihot esculenta HOM05D003497 ORTHO05D003964 1.9e-39 167.2 243 44.0
MBI16_g32073_MAGBIO Magnolia biondii HOM05D003497 ORTHO05D003964 2.7e-38 163.3 267 40.1
Thecc.02G120200 Theobroma cacao HOM05D003497 ORTHO05D003964 6.1e-38 162.2 239 41.4
Potri.005G109700 Populus trichocarpa HOM05D003497 ORTHO05D003964 1.0e-37 161.4 240 41.2
COL.COLO4_32482 Corchorus olitorius HOM05D003497 ORTHO05D003964 3.9e-37 159.5 282 40.1
Sabra05G0090000 Salix brachista HOM05D003497 ORTHO05D003964 6.7e-37 158.7 240 42.5
CSS0043603 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 5.7e-36 155.6 241 40.7
CSS0013379 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 2.8e-35 153.3 271 38.4
Duzib132G0146 Durio zibethinus HOM05D003497 ORTHO05D003964 8.2e-35 151.8 240 39.2
Prupe.8G150500 Prunus persica HOM05D003497 ORTHO05D003964 8.2e-35 151.8 237 39.7
Gorai.013G052000 Gossypium raimondii HOM05D003497 ORTHO05D003964 1.8e-34 150.6 239 40.2
AUR62027025 Chenopodium quinoa HOM05D003497 ORTHO05D003964 2.4e-34 150.2 240 38.8
Actinidia28001 Actinidia chinensis HOM05D000349 ORTHO05D003964 3.1e-34 149.8 249 38.6
CANSAT25G1915 Cannabis sativa HOM05D003497 ORTHO05D003964 3.1e-34 149.8 238 37.0
GSVIVG01037051001 Vitis vinifera HOM05D003497 ORTHO05D003964 4.1e-34 149.4 243 37.4
Ah.01g007110 Amaranthus hybridus HOM05D003497 ORTHO05D003964 7.0e-34 148.7 240 39.6
CSS0047045 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 7.0e-34 148.7 272 39.3
Gohir.D13G046300 Gossypium hirsutum HOM05D003497 ORTHO05D003964 9.1e-34 148.3 239 40.2
RcHm_v2.0_Chr6g0248431 Rosa chinensis HOM05D003497 ORTHO05D003964 9.1e-34 148.3 240 38.8
TWI14G1256 Tripterygium wilfordii HOM05D003497 ORTHO05D003964 1.2e-33 147.9 242 38.8
Gohir.A13G047900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 2.0e-33 147.1 239 39.7
PGR142G0099 Punica granatum HOM05D003497 ORTHO05D003964 2.6e-33 146.7 248 35.5
Gohir.D02G203142 Gossypium hirsutum HOM05D003497 ORTHO05D004787 3.5e-33 146.4 246 37.8
Eucgr.G00280 Eucalyptus grandis HOM05D003497 ORTHO05D003964 5.9e-33 145.6 282 35.1
Eucgr.I02495 Eucalyptus grandis HOM05D003497 ORTHO05D003964 5.9e-33 145.6 286 35.7
Gorai.005G229700 Gossypium raimondii HOM05D003497 ORTHO05D003964 5.9e-33 145.6 246 38.2
Lj5g0015963 Lotus japonicus HOM05D003497 ORTHO05D003964 1.0e-32 144.8 244 36.5
AUR62030867 Chenopodium quinoa HOM05D003497 ORTHO05D003964 1.3e-32 144.4 245 39.2
FvH4_2g03310 Fragaria vesca HOM05D003497 ORTHO05D003964 1.7e-32 144.1 238 38.2
CDE04G1396 Ceratophyllum demersum HOM05D003497 ORTHO05D003964 2.2e-32 143.7 242 37.2
MELO3C018024.2 Cucumis melo HOM05D003497 ORTHO05D003964 2.2e-32 143.7 237 38.0
Gohir.A03G180900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 2.2e-32 143.7 245 38.4
CsaV3_4G000070 Cucumis sativus L. HOM05D003497 ORTHO05D003964 6.5e-32 142.1 238 37.4
TPR.G21155 Trifolium pratense HOM05D003497 ORTHO05D003964 6.5e-32 142.1 251 35.9
CSS0013739 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 8.5e-32 141.7 238 39.1
Ca_11026_v3 Cicer arietinum L. HOM05D003497 ORTHO05D003964 1.1e-31 141.4 255 36.1
Atru.chr5.2286 Acer truncatum HOM05D003497 ORTHO05D003964 1.5e-31 141.0 241 34.9
DCAR_021943 Daucus carota HOM05D003497 ORTHO05D003964 1.5e-31 141.0 241 36.5
Medtr4g019560 Medicago truncatula HOM05D003497 ORTHO05D003964 1.5e-31 141.0 237 36.7
Medtr7g057330 Medicago truncatula HOM05D003497 ORTHO05D003964 1.5e-31 141.0 237 36.3
ClCG10G010030 Citrullus lanatus HOM05D003497 ORTHO05D003964 1.9e-31 140.6 237 37.1
Haze_10298 Corylus avellana HOM05D003497 ORTHO05D003964 1.9e-31 140.6 248 36.3
Sc18g0007350 Simmondsia chinensis HOM05D003497 ORTHO05D003964 1.9e-31 140.6 247 36.4
ATR0739G052 Amborella trichopoda HOM05D003497 ORTHO05D003964 3.2e-31 139.8 246 35.8
Lalb_Chr06g0164971 Lupinus albus HOM05D003497 ORTHO05D003964 4.2e-31 139.4 235 38.3
Sed0023460 Sechium edule HOM05D003497 ORTHO05D003964 5.5e-31 139.0 273 37.0
Atru.chr5.2290 Acer truncatum HOM05D003497 ORTHO05D003964 7.2e-31 138.7 233 36.5
arahy.Tifrunner.gnm1.ann1.6MCD86 Arachis hypogaea HOM05D003497 ORTHO05D003964 1.2e-30 137.9 244 36.9
FAN20G1538 Fragaria x ananassa HOM05D003497 ORTHO05D003964 1.2e-30 137.9 237 37.6
FAN20G2306 Fragaria x ananassa HOM05D003497 ORTHO05D003964 1.2e-30 137.9 237 37.6
FAN27G0942 Fragaria x ananassa HOM05D003497 ORTHO05D003964 1.6e-30 137.5 238 37.4
Oeu025307.1 Olea europaea HOM05D003497 ORTHO05D003964 1.6e-30 137.5 241 36.9
Rhsim05G0093000 Rhododendron simsii HOM05D003497 ORTHO05D003964 2.1e-30 137.1 241 36.1
vmacro22257 Vaccinium macrocarpon HOM05D003497 ORTHO05D003964 6.1e-30 135.6 266 35.3
Glyma.20G135900 Glycine max HOM05D003497 ORTHO05D003964 8.0e-30 135.2 255 34.1
Phvul.007G047200 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 8.0e-30 135.2 247 35.2
Ciclev10028208m.g Citrus clementina HOM05D003497 ORTHO05D003964 1.0e-29 134.8 273 33.3
Glyma.10G255600 Glycine max HOM05D003497 ORTHO05D003964 1.0e-29 134.8 256 34.4
Medtr1g106020 Medicago truncatula HOM05D003497 ORTHO05D003964 8.8e-29 131.7 255 36.5
Psat6g213160 Pisum sativum HOM05D003497 ORTHO05D003964 8.8e-29 131.7 240 37.1
VMungo0720G1031 Vigna mungo HOM05D003497 ORTHO05D003964 1.2e-28 131.3 247 34.0
TWI14G0922 Tripterygium wilfordii HOM05D003497 ORTHO05D003964 3.3e-28 129.8 245 36.7
EL10Ac9g22176 Beta vulgaris HOM05D003497 ORTHO05D003964 4.4e-28 129.4 241 34.4
BraA07t29128Z Brassica rapa HOM05D003497 ORTHO05D003964 5.7e-28 129.0 252 36.5
Peaxi162Scf00152g00641 Petunia axillaris HOM05D003497 ORTHO05D003964 5.7e-28 129.0 242 36.0
MSTRG.16671 Avicennia marina HOM05D003497 ORTHO05D003964 7.5e-28 128.6 237 33.8
A07p13790 Brassica napus HOM05D003497 ORTHO05D003964 9.7e-28 128.3 252 36.5
Carub.0001s2328 Capsella rubella HOM05D003497 ORTHO05D003964 1.3e-27 127.9 235 37.0
Aqoxy5G00815 Aquilegia oxysepala HOM05D003497 ORTHO05D003964 1.7e-27 127.5 224 38.8
Eucgr.H03378 Eucalyptus grandis HOM05D003497 ORTHO05D003964 1.7e-27 127.5 240 37.9
C07p20260 Brassica napus HOM05D003497 ORTHO05D003964 2.2e-27 127.1 252 36.5
Cpa.g.c35687 Carica papaya HOM05D003497 ORTHO05D003964 2.2e-27 127.1 205 41.5
Sp7g01980 Schrenkiella parvula HOM05D003497 ORTHO05D003964 2.2e-27 127.1 240 36.7
AL1G37530 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 3.7e-27 126.3 238 38.7
BcaC06g35052 Brassica carinata HOM05D003497 ORTHO05D003964 3.7e-27 126.3 252 36.5
BolC7t42548H Brassica oleracea HOM05D003497 ORTHO05D003964 3.7e-27 126.3 252 36.5
SGA_v2.0_scaffold225G43063 Striga asiatica HOM05D003497 ORTHO05D003964 3.7e-27 126.3 243 37.9
Sopen01g002980 Solanum pennellii HOM05D003497 ORTHO05D003964 4.8e-27 125.9 238 33.6
unitig_744.g24206 Utricularia gibba HOM05D003497 ORTHO05D003964 4.8e-27 125.9 240 36.2
THA.LOC104822142 Tarenaya hassleriana HOM05D003497 ORTHO05D003964 6.3e-27 125.6 239 37.2
Aa31LG7G7660 Aethionema arabicum HOM05D003497 ORTHO05D003964 8.2e-27 125.2 238 35.7
Solyc01g006990.4 Solanum lycopersicum HOM05D003497 ORTHO05D003964 1.8e-26 124.0 238 33.2
CARHR024190 Cardamine hirsuta HOM05D003497 ORTHO05D003964 2.4e-26 123.6 240 37.1
Cc02_g20070 Coffea canephora HOM05D003497 ORTHO05D003964 2.4e-26 123.6 241 36.5
HPP92_007713 Vanilla planifolia HOM05D003497 ORTHO05D003964 2.4e-26 123.6 235 33.2
PGSC0003DMG400021329 Solanum tuberosum HOM05D003497 ORTHO05D003964 5.3e-26 122.5 239 34.3
BcaB03g11953 Brassica carinata HOM05D003497 ORTHO05D003964 7.0e-26 122.1 241 35.3
MD10G1110600 Malus domestica HOM05D003497 ORTHO05D003964 2.0e-25 120.6 257 34.6
Sp1g21160 Schrenkiella parvula HOM05D003497 ORTHO05D003964 3.5e-25 119.8 236 34.7
AT1G23780 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 4.5e-25 119.4 238 37.8
BcaB03g14136 Brassica carinata HOM05D003497 ORTHO05D003964 5.9e-25 119.0 240 35.8
Thhalv10009461m.g Eutrema salsugineum HOM05D003497 ORTHO05D003964 5.9e-25 119.0 267 34.1
AT1G23770 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 1.0e-24 118.2 242 35.5
THA.LOC104824678 Tarenaya hassleriana HOM05D003497 ORTHO05D003964 1.3e-24 117.9 238 35.3
CAN.G911.43 Capsicum annuum HOM05D003497 ORTHO05D003964 1.7e-24 117.5 278 31.3
Migut.B00464 Erythranthe guttata HOM05D003497 ORTHO05D003964 2.2e-24 117.1 272 33.8
AL1G37520 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 3.8e-24 116.3 235 35.3
PGR102G1733 Punica granatum HOM05D003497 ORTHO05D003964 5.0e-24 115.9 264 33.3
MD10G1110300 Malus domestica HOM05D003497 ORTHO05D003964 8.5e-24 115.2 246 33.3
CARHR164020 Cardamine hirsuta HOM05D003497 ORTHO05D003964 1.1e-23 114.8 243 35.0
CARHR164040 Cardamine hirsuta HOM05D003497 ORTHO05D003964 1.1e-23 114.8 239 34.3
Lsat_1_v5_gn_5_117220 Lactuca sativa HOM05D003497 ORTHO05D003964 1.1e-23 114.8 239 33.5
Nitab4.5_0000003g0710 Nicotiana tabacum HOM05D003497 ORTHO05D003964 1.1e-23 114.8 249 32.9
ECA234G0007 Erigeron canadensis HOM05D003497 ORTHO05D003964 1.9e-23 114.0 235 32.3
MD05G1106300 Malus domestica HOM05D003497 ORTHO05D003964 1.9e-23 114.0 207 39.6
HanXRQChr16g0502181 Helianthus annuus HOM05D003497 ORTHO05D003964 2.5e-23 113.6 243 33.3
Carub.0001s2329 Capsella rubella HOM05D003497 ORTHO05D003964 3.2e-23 113.2 242 38.0
SalBow6G6060 Salvia bowleyana HOM05D003497 ORTHO05D003964 4.2e-23 112.8 233 34.3
C04p49930 Brassica napus HOM05D003497 ORTHO05D003964 9.4e-23 111.7 233 34.3
BcaB06g27743 Brassica carinata HOM05D003497 ORTHO05D003964 2.7e-22 110.2 242 34.3
A04p15640 Brassica napus HOM05D003497 ORTHO05D003964 3.6e-22 109.8 236 33.1
BraA04t17199Z Brassica rapa HOM05D003497 ORTHO05D003964 4.7e-22 109.4 236 33.1
Nitab4.5_0003918g0020 Nicotiana tabacum HOM05D003497 ORTHO05D003964 6.1e-22 109.0 240 32.5
BolC4t26586H Brassica oleracea HOM05D003497 ORTHO05D003964 1.0e-21 108.2 233 33.9
MD10G1110700 Malus domestica HOM05D003497 ORTHO05D003964 1.0e-21 108.2 208 38.0
Carub.0002s1705 Capsella rubella HOM05D003497 ORTHO05D003964 1.4e-21 107.8 266 32.7
AagrBONN_evm.TU.Sc2ySwM_344.3993 Anthoceros agrestis HOM05D003497 ORTHO05D003964 2.3e-21 107.1 243 30.9
SEGI_36088 Sequoiadendron giganteum HOM05D003497 ORTHO05D003964 3.0e-21 106.7 244 30.7
Phvul.005G029200 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 5.2e-21 105.9 259 31.3
Phvul.005G037100 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 6.8e-21 105.5 252 31.3
Ciclev10028907m.g Citrus clementina HOM05D003497 ORTHO05D003964 1.2e-20 104.8 239 30.1
PGR102G1148 Punica granatum HOM05D003497 ORTHO05D003964 2.6e-20 103.6 247 31.6
RcHm_v2.0_Chr4g0407391 Rosa chinensis HOM05D003497 ORTHO05D003964 3.4e-20 103.2 254 31.5
BcaC02g08840 Brassica carinata HOM05D003497 ORTHO05D003964 5.7e-20 102.4 237 32.1
COL.COLO4_32483 Corchorus olitorius HOM05D003497 ORTHO05D003964 2.2e-19 100.5 238 32.8
Dinv09537 Davidia involucrata HOM05D006380 ORTHO05D008400 2.4e-18 97.1 189 35.4
Phvul.005G029000 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 3.1e-18 96.7 248 30.6
FvH4_5g20811 Fragaria vesca HOM05D003497 ORTHO05D003964 7.0e-18 95.5 259 30.1
AL2G29670 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 1.6e-17 94.4 218 31.7
Zm00001eb009480 Zea mays HOM05D003497 ORTHO05D003964 1.6e-17 94.4 253 28.9
AT1G70360 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 3.5e-17 93.2 214 29.9
Migut.B00469 Erythranthe guttata HOM05D003497 ORTHO05D003964 3.5e-17 93.2 239 28.9
Os03g0232000 Oryza sativa ssp. japonica HOM05D003497 ORTHO05D003964 5.9e-17 92.4 232 30.2
RcHm_v2.0_Chr4g0407381 Rosa chinensis HOM05D003497 ORTHO05D003964 5.9e-17 92.4 238 30.3
Mapoly0001s0353 Marchantia polymorpha HOM05D003497 ORTHO05D003964 7.7e-17 92.0 260 28.1
Pp3c15_1340 Physcomitrium patens HOM05D003497 ORTHO05D003964 1.3e-16 91.3 257 28.0
RcHm_v2.0_Chr4g0407371 Rosa chinensis HOM05D003497 ORTHO05D003964 1.3e-16 91.3 243 28.0
FAN04G2985 Fragaria x ananassa HOM05D003497 ORTHO05D003964 1.7e-16 90.9 250 28.0
MD10G1175800 Malus domestica HOM05D003497 ORTHO05D003964 2.2e-16 90.5 244 32.0
Potri.015G020600 Populus trichocarpa HOM05D003497 ORTHO05D003964 5.0e-16 89.4 146 39.0
FAN18G2835 Fragaria x ananassa HOM05D003497 ORTHO05D003964 6.5e-16 89.0 260 29.6
Sed0000294 Sechium edule HOM05D003497 ORTHO05D003964 1.9e-15 87.4 250 28.4
Migut.B00470 Erythranthe guttata HOM05D003497 ORTHO05D003964 2.5e-15 87.0 245 29.4
Sed0016990 Sechium edule HOM05D003497 ORTHO05D003964 7.2e-15 85.5 233 26.6
Eucgr.I02498 Eucalyptus grandis HOM05D003497 ORTHO05D003964 2.8e-14 83.6 279 28.0
HanXRQChr10g0290301 Helianthus annuus HOM05D003497 ORTHO05D003964 8.0e-14 82.0 251 28.3
HanXRQChr10g0290281 Helianthus annuus HOM05D003497 ORTHO05D003964 3.0e-13 80.1 262 26.7
Sed0003270 Sechium edule HOM05D003497 ORTHO05D003964 2.0e-12 77.4 244 25.8
SMO270G0122 Selaginella moellendorffii HOM05D003497 ORTHO05D003964 9.8e-12 75.1 204 30.9
PSO170G1569 Papaver somniferum HOM05D003497 ORTHO05D003964 1.3e-11 74.7 74 51.4
Haze_10290 Corylus avellana HOM05D003497 ORTHO05D003964 4.9e-11 72.8 270 26.7
HanXRQChr10g0290271 Helianthus annuus HOM05D003497 ORTHO05D003964 1.8e-10 70.9 108 34.3
PSO017G5705 Papaver somniferum HOM05D003497 ORTHO05D003964 3.1e-10 70.1 74 50.0
RcHm_v2.0_Chr4g0395411 Rosa chinensis HOM05D003497 ORTHO05D003964 7.0e-10 68.9 83 42.2
MD10G1110400 Malus domestica HOM05D003497 ORTHO05D003964 1.2e-09 68.2 83 38.6
SEGI_41103 Sequoiadendron giganteum HOM05D003497 ORTHO05D003964 2.0e-09 67.4 223 29.6
PGR119G2181 Punica granatum HOM05D003497 ORTHO05D003964 3.5e-09 66.6 133 30.1
AL5G35170 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 1.9e-07 60.8 139 30.2
Sed0009840 Sechium edule HOM05D003497 ORTHO05D003964 1.9e-07 60.8 157 29.3
BcaC02g08839 Brassica carinata HOM05D003497 ORTHO05D003964 7.3e-07 58.9 169 29.6
Migut.B00467 Erythranthe guttata HOM05D003497 ORTHO05D003964 7.3e-07 58.9 89 39.3
Haze_10296 Corylus avellana HOM05D003497 ORTHO05D003964 9.5e-07 58.5 64 45.3
Potri.017G134500 Populus trichocarpa HOM05D003497 ORTHO05D003964 2.1e-06 57.4 54 53.7


User provided reference genes

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