Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 4.0e-170 601.3 290 100.0
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 4.6e-134 481.5 290 77.2
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.7e-133 479.6 290 76.9
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 6.2e-131 471.1 288 77.1
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 8.1e-131 470.7 288 76.4
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 1.4e-130 469.9 288 76.4
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 6.9e-130 467.6 290 75.9
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 9.0e-130 467.2 288 77.1
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 9.9e-129 463.8 275 78.9
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 1.3e-128 463.4 287 74.6
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 1.9e-127 459.5 290 74.5
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 1.9e-127 459.5 290 77.9
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 3.2e-127 458.8 290 73.1
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 1.2e-126 456.8 290 74.5
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 2.7e-126 455.7 290 72.8
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 3.5e-126 455.3 290 75.2
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 3.5e-126 455.3 290 74.8
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 4.6e-126 454.9 287 73.2
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 7.9e-126 454.1 290 72.8
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 7.9e-126 454.1 290 74.8
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 1.3e-125 453.4 290 73.1
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 1.3e-125 453.4 290 72.1
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.3e-125 453.4 290 71.7
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 3.9e-125 451.8 290 74.5
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 3.9e-125 451.8 287 72.8
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 6.6e-125 451.1 287 73.2
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 1.1e-124 450.3 287 73.9
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 1.5e-124 449.9 290 71.0
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 1.9e-124 449.5 290 74.1
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 5.6e-124 448.0 290 72.1
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 3.6e-123 445.3 288 72.6
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 6.2e-123 444.5 304 70.7
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 3.1e-122 442.2 312 67.3
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 4.0e-122 441.8 287 72.5
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 5.3e-122 441.4 290 72.4
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 9.0e-122 440.7 287 72.8
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 9.0e-122 440.7 287 71.4
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 1.2e-121 440.3 287 72.8
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 1.5e-121 439.9 290 70.3
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 1.5e-121 439.9 294 70.4
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 2.0e-121 439.5 288 71.9
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 2.0e-121 439.5 330 66.1
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 2.6e-121 439.1 287 72.8
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 2.6e-121 439.1 290 70.3
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 2.6e-121 439.1 288 71.9
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 4.5e-121 438.3 287 72.8
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 4.5e-121 438.3 288 74.0
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 5.8e-121 438.0 279 74.6
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 1.3e-120 436.8 287 72.1
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 1.3e-120 436.8 288 72.2
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 3.8e-120 435.3 287 71.8
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 6.4e-120 434.5 290 71.4
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 6.4e-120 434.5 290 69.7
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 8.4e-120 434.1 290 69.3
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 1.1e-119 433.7 290 71.7
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 1.4e-119 433.3 290 69.7
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 1.4e-119 433.3 290 70.0
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 3.2e-119 432.2 287 71.8
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 3.2e-119 432.2 288 71.5
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 4.2e-119 431.8 290 70.0
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 9.3e-119 430.6 280 70.4
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 1.2e-118 430.3 287 71.4
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 1.2e-118 430.3 286 71.0
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 1.0e-117 427.2 290 69.0
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.3e-117 426.8 290 70.7
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.3e-117 426.8 290 70.7
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.3e-117 426.8 290 70.7
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 2.3e-117 426.0 288 69.4
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 3.0e-117 425.6 290 68.6
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 1.1e-116 423.7 286 69.6
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 3.3e-116 422.2 286 69.9
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 9.6e-116 420.6 288 69.8
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 1.3e-115 420.2 283 68.6
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 2.8e-115 419.1 289 66.8
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 8.1e-115 417.5 291 68.0
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 1.1e-114 417.2 289 68.2
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 1.8e-114 416.4 289 66.8
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 2.0e-113 412.9 285 66.0
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 2.6e-113 412.5 272 71.0
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 5.8e-113 411.4 288 66.3
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 7.6e-113 411.0 290 65.9
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 1.7e-112 409.8 271 72.0
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 1.7e-112 409.8 288 66.3
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 2.9e-112 409.1 272 67.6
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 4.9e-112 408.3 272 69.9
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 4.9e-112 408.3 272 69.9
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 8.4e-112 407.5 285 65.6
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 7.1e-111 404.4 272 66.9
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 2.1e-110 402.9 283 70.0
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 3.5e-110 402.1 284 70.4
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 2.3e-109 399.4 285 64.9
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 2.4e-106 389.4 248 73.0
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 3.2e-103 379.0 247 70.4
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 2.7e-102 375.9 265 65.7
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 1.6e-99 366.7 238 71.8
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 2.8e-99 365.9 285 60.4
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.9e-96 355.9 213 77.5
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 1.1e-95 354.0 287 58.5
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 1.5e-89 333.6 275 57.8
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 2.3e-77 293.1 180 75.0
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 2.4e-74 283.1 262 50.4
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 2.9e-72 276.2 278 47.1
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.5e-68 263.8 258 48.8
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 5.7e-68 261.9 258 48.8
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 8.3e-51 204.9 151 66.2
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 2.4e-50 203.4 255 40.8
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.4e-45 187.6 111 79.3
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 2.5e-39 166.8 231 45.9
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 1.3e-35 154.5 108 64.8
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 2.9e-35 153.3 197 43.7
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 1.1e-34 151.4 163 50.9
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.2e-33 147.9 94 73.4
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 6.0e-33 145.6 88 80.7
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 1.1e-31 141.4 94 66.0
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 6.4e-27 125.6 77 74.0
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 1.8e-21 107.5 67 76.1
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 1.8e-21 107.5 66 75.8
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 6.7e-08 62.4 44 61.4


User provided reference genes

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