Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 1.5e-77 292.7 145 100.0
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 2.7e-74 282.0 145 95.9
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 7.8e-58 227.3 137 78.8
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 1.7e-57 226.1 144 75.7
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 3.0e-57 225.3 136 78.7
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 5.1e-57 224.6 144 75.0
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 1.9e-56 222.6 143 76.9
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 2.5e-56 222.2 135 79.3
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 4.3e-56 221.5 137 77.4
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 5.6e-56 221.1 119 85.7
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 5.6e-56 221.1 145 74.5
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 7.3e-56 220.7 128 82.0
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 7.3e-56 220.7 137 77.4
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 7.3e-56 220.7 132 80.3
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 9.5e-56 220.3 135 77.8
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 2.1e-55 219.2 137 76.6
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 2.1e-55 219.2 137 76.6
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 2.1e-55 219.2 127 79.5
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 2.1e-55 219.2 140 75.7
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 2.1e-55 219.2 143 74.1
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 2.8e-55 218.8 137 76.6
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 3.6e-55 218.4 141 73.0
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 3.6e-55 218.4 141 73.0
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 3.6e-55 218.4 123 83.7
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 3.6e-55 218.4 141 75.9
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 4.7e-55 218.0 145 72.4
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 6.2e-55 217.6 121 83.5
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 6.2e-55 217.6 134 78.4
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 6.2e-55 217.6 123 84.6
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 1.1e-54 216.9 123 82.9
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 1.1e-54 216.9 124 80.6
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 1.1e-54 216.9 139 74.8
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 1.4e-54 216.5 143 76.2
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 1.4e-54 216.5 137 76.6
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 1.4e-54 216.5 145 73.8
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 1.4e-54 216.5 119 84.0
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 1.4e-54 216.5 148 73.0
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 1.8e-54 216.1 133 76.7
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 1.8e-54 216.1 150 70.7
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 2.4e-54 215.7 128 82.0
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 2.4e-54 215.7 124 83.1
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 3.1e-54 215.3 146 71.9
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 3.1e-54 215.3 138 76.1
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 5.2e-54 214.5 137 78.1
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 6.8e-54 214.2 119 84.9
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 8.9e-54 213.8 137 75.9
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 1.2e-53 213.4 133 78.2
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 1.2e-53 213.4 146 73.3
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 1.2e-53 213.4 119 84.0
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 1.2e-53 213.4 148 71.6
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 1.5e-53 213.0 145 73.1
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 2.0e-53 212.6 145 70.3
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 2.6e-53 212.2 146 73.3
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 2.6e-53 212.2 127 79.5
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 2.6e-53 212.2 144 71.5
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 3.4e-53 211.8 119 83.2
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 4.4e-53 211.5 148 70.9
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 5.8e-53 211.1 128 79.7
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 5.8e-53 211.1 132 79.5
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 5.8e-53 211.1 124 80.6
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 9.9e-53 210.3 127 78.7
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 9.9e-53 210.3 117 83.8
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 1.3e-52 209.9 118 83.1
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 2.9e-52 208.8 118 83.1
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 2.9e-52 208.8 144 68.1
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 3.8e-52 208.4 118 82.2
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 1.1e-51 206.8 128 78.1
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 1.4e-51 206.5 124 79.8
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 1.9e-51 206.1 143 71.3
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 1.9e-51 206.1 118 80.5
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 1.9e-51 206.1 154 68.2
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 2.4e-51 205.7 134 74.6
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 3.2e-51 205.3 134 73.1
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 3.2e-51 205.3 144 72.2
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 3.2e-51 205.3 147 70.1
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 3.2e-51 205.3 125 76.0
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 5.4e-51 204.5 122 80.3
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 5.4e-51 204.5 135 73.3
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 9.2e-51 203.8 144 69.4
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 9.2e-51 203.8 138 72.5
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 9.2e-51 203.8 144 69.4
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 9.2e-51 203.8 128 75.8
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 1.6e-50 203.0 118 81.4
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 2.1e-50 202.6 144 70.8
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 2.1e-50 202.6 128 75.8
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 2.1e-50 202.6 144 70.8
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 4.6e-50 201.4 119 80.7
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 1.0e-49 200.3 146 68.5
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 3.9e-49 198.4 145 70.3
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 1.6e-47 193.0 125 71.2
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 3.6e-47 191.8 120 71.7
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 4.7e-47 191.4 128 66.4
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 6.2e-47 191.0 125 70.4
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 1.2e-45 186.8 111 79.3
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 1.5e-45 186.4 133 67.7
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 5.8e-45 184.5 133 66.9
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 9.9e-45 183.7 123 68.3
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 5.4e-43 177.9 144 63.2
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 7.1e-43 177.6 151 61.6
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 1.7e-41 172.9 134 62.7
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 8.7e-41 170.6 120 65.0
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 2.5e-40 169.1 131 62.6
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 1.6e-39 166.4 147 61.9
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 1.3e-36 156.8 135 60.7
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 1.4e-35 153.3 122 60.7
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 9.3e-35 150.6 119 58.8
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 7.9e-34 147.5 120 58.3
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 4.3e-24 115.2 78 71.8
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.3e-23 113.6 71 74.6
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 3.7e-23 112.1 71 73.2
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 2.4e-22 109.4 69 73.9
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 4.5e-21 105.1 86 65.1
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 5.8e-21 104.8 120 48.3
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 2.5e-19 99.4 116 44.8
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 8.7e-17 90.9 60 68.3
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 1.6e-10 70.1 61 63.9
Sed0005624 Sechium edule HOM05D006706 ORTHO05D373521 1.4e-06 57.0 60 48.3


User provided reference genes

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