Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 1.7e-131 472.6 237 100.0
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 1.7e-131 472.6 237 100.0
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 1.7e-131 472.6 237 100.0
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 3.5e-124 448.4 224 100.0
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 8.7e-123 443.7 222 100.0
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 3.7e-113 411.8 263 82.5
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 1.2e-108 396.7 263 79.1
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 3.5e-55 219.2 267 50.2
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 9.8e-50 201.1 263 47.1
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 2.3e-46 189.9 266 47.7
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 3.3e-45 186.0 321 40.2
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 5.6e-45 185.3 266 45.5
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 1.0e-43 181.0 266 44.0
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 1.0e-43 181.0 262 44.7
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 1.8e-43 180.3 266 43.6
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.5e-42 177.2 262 42.7
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 1.5e-42 177.2 262 41.6
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 3.4e-42 176.0 262 43.1
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 7.5e-42 174.9 266 43.6
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 9.8e-42 174.5 264 44.7
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 1.7e-41 173.7 265 43.8
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 8.3e-41 171.4 278 40.3
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 1.1e-40 171.0 265 42.3
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 1.1e-40 171.0 265 42.6
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 1.1e-40 171.0 262 43.5
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 1.6e-39 167.2 262 41.2
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 1.6e-39 167.2 219 45.7
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 4.6e-39 165.6 265 37.0
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 1.0e-38 164.5 264 41.3
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 1.3e-38 164.1 273 38.1
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 2.3e-38 163.3 263 42.2
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 1.1e-37 161.0 239 44.4
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 1.9e-37 160.2 263 40.7
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 1.9e-37 160.2 263 40.3
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 7.3e-37 158.3 263 40.3
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 7.3e-37 158.3 270 41.1
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 9.5e-37 157.9 216 43.1
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 1.8e-35 153.7 263 38.4
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 3.1e-35 152.9 263 40.7
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 5.2e-35 152.1 270 38.9
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 5.2e-35 152.1 267 40.8
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.2e-34 151.0 263 40.3
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 1.2e-34 151.0 266 39.8
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 2.6e-34 149.8 262 40.5
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 3.4e-34 149.4 266 39.5
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 9.8e-34 147.9 268 38.1
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 9.8e-34 147.9 268 38.4
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 2.2e-33 146.7 261 38.3
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 8.3e-33 144.8 275 38.2
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 8.3e-33 144.8 183 51.4
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 1.1e-32 144.4 262 35.9
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 1.9e-32 143.7 274 36.9
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 1.9e-32 143.7 264 40.2
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 4.1e-32 142.5 261 38.3
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 5.4e-32 142.1 265 37.4
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 7.1e-32 141.7 262 37.4
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 9.2e-32 141.4 264 37.9
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 2.1e-31 140.2 265 36.6
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 2.1e-31 140.2 217 38.7
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 2.7e-31 139.8 264 36.7
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 2.7e-31 139.8 268 37.3
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 3.5e-31 139.4 266 36.8
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 6.0e-31 138.7 261 35.6
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 6.0e-31 138.7 236 39.4
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 1.3e-30 137.5 262 36.3
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 3.9e-30 136.0 263 34.2
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 5.1e-30 135.6 271 35.4
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 1.9e-29 133.7 265 35.5
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 6.2e-28 128.6 220 39.1
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 8.1e-28 128.3 220 39.5
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 8.1e-28 128.3 175 47.4
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 8.1e-28 128.3 221 38.5
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 1.1e-27 127.9 233 38.2
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 1.4e-27 127.5 219 37.0
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 1.8e-27 127.1 263 36.9
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 2.3e-27 126.7 264 34.5
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 1.2e-26 124.4 263 35.7
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 1.2e-26 124.4 262 34.0
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 1.5e-26 124.0 264 36.4
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 2.9e-25 119.8 222 36.0
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 2.9e-25 119.8 241 32.4
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 3.7e-25 119.4 265 32.1
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 2.4e-24 116.7 267 33.7
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 2.4e-24 116.7 165 46.1
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 7.1e-24 115.2 264 34.1
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 1.6e-23 114.0 247 33.2
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 2.1e-23 113.6 262 35.9
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 2.7e-23 113.2 262 35.5
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 3.5e-23 112.8 273 31.5
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 7.8e-23 111.7 178 42.1
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 1.1e-21 107.8 262 34.0
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 4.3e-21 105.9 265 34.0
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 9.6e-21 104.8 261 30.7
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 2.1e-20 103.6 261 34.1
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 3.6e-20 102.8 263 33.1
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 6.2e-20 102.1 260 33.1
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 6.2e-20 102.1 272 31.6
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 1.1e-19 101.3 262 33.2
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 1.1e-19 101.3 218 34.4
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 1.8e-19 100.5 243 30.5
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 2.4e-19 100.1 262 31.3
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 3.1e-19 99.8 265 33.6
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 4.0e-19 99.4 263 32.7
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 5.2e-19 99.0 263 33.1
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 8.9e-19 98.2 263 32.3
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 8.9e-19 98.2 262 33.6
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 1.2e-18 97.8 263 32.7
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 2.6e-18 96.7 264 33.7
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 3.4e-18 96.3 269 32.7
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 5.8e-18 95.5 143 42.7
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 6.4e-17 92.0 143 42.0
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 1.4e-16 90.9 263 27.4
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 3.2e-16 89.7 207 31.9
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 1.2e-15 87.8 264 33.0
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 1.2e-15 87.8 263 27.4
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 1.6e-15 87.4 194 34.0
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 3.5e-15 86.3 221 28.5
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 1.0e-14 84.7 263 27.8
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 1.3e-12 77.8 142 36.6
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 1.6e-12 77.4 129 35.7
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 6.9e-11 72.0 113 41.6
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 8.4e-09 65.1 215 30.7
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 2.4e-08 63.5 62 48.4
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 2.1e-07 60.5 213 23.0


User provided reference genes

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