Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 6.8e-105 384.0 199 100.0
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 6.4e-103 377.5 199 98.5
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 3.2e-62 242.3 191 64.9
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 1.5e-59 233.4 191 62.3
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 2.6e-59 232.6 194 61.9
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 4.4e-59 231.9 191 63.4
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 9.7e-59 230.7 191 61.8
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 1.3e-58 230.3 189 64.6
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 1.7e-58 229.9 193 63.2
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 8.2e-58 227.6 193 61.7
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 2.4e-57 226.1 198 60.1
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 4.1e-57 225.3 192 61.5
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 4.1e-57 225.3 191 61.8
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 6.9e-57 224.6 187 60.4
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 6.9e-57 224.6 191 59.7
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 9.1e-57 224.2 188 60.6
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 9.1e-57 224.2 188 60.1
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 1.2e-56 223.8 187 59.9
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 2.0e-56 223.0 191 57.6
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 2.6e-56 222.6 187 59.9
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 3.4e-56 222.2 198 58.6
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 1.0e-55 220.7 193 60.1
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 1.0e-55 220.7 191 59.2
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 1.3e-55 220.3 205 56.6
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 1.3e-55 220.3 191 59.2
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 1.7e-55 219.9 189 59.3
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.7e-55 219.9 200 57.0
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 1.7e-55 219.9 192 58.3
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 1.7e-55 219.9 192 59.4
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 2.2e-55 219.5 198 56.6
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 2.2e-55 219.5 191 59.2
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 2.9e-55 219.2 205 56.1
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 3.8e-55 218.8 191 55.5
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 5.0e-55 218.4 191 59.2
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 6.5e-55 218.0 193 58.5
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 8.5e-55 217.6 165 63.0
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 8.5e-55 217.6 191 58.1
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 8.5e-55 217.6 191 58.1
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 1.1e-54 217.2 192 54.7
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 1.1e-54 217.2 168 63.1
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 1.9e-54 216.5 203 58.6
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 2.5e-54 216.1 191 56.5
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 2.5e-54 216.1 192 58.9
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 3.2e-54 215.7 192 61.5
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 3.2e-54 215.7 198 58.6
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 3.2e-54 215.7 191 60.2
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 4.2e-54 215.3 192 58.3
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 5.5e-54 214.9 196 57.1
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 9.4e-54 214.2 190 54.7
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 2.1e-53 213.0 189 58.2
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 2.1e-53 213.0 188 58.5
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 2.7e-53 212.6 186 59.7
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 2.7e-53 212.6 197 56.9
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 2.7e-53 212.6 181 58.0
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 2.7e-53 212.6 192 59.9
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 2.7e-53 212.6 188 59.0
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 3.6e-53 212.2 191 53.9
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 4.7e-53 211.8 191 59.2
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 6.1e-53 211.5 189 61.4
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 6.1e-53 211.5 158 67.7
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 6.1e-53 211.5 190 56.3
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 1.8e-52 209.9 196 56.6
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 1.8e-52 209.9 156 66.0
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 1.8e-52 209.9 158 67.1
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 2.3e-52 209.5 193 56.5
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 8.8e-52 207.6 162 61.7
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 2.0e-51 206.5 192 57.8
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 2.6e-51 206.1 157 63.7
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 3.3e-51 205.7 168 58.9
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 9.7e-51 204.1 154 65.6
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 1.3e-50 203.8 154 64.3
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 2.8e-50 202.6 153 65.4
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 6.3e-50 201.4 156 63.5
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 1.4e-49 200.3 163 62.6
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 1.8e-49 199.9 154 61.0
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 2.4e-49 199.5 172 57.6
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 3.5e-48 195.7 161 59.6
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 4.5e-48 195.3 174 56.3
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 5.9e-48 194.9 156 58.3
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 7.7e-48 194.5 226 50.0
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.3e-47 193.7 227 48.5
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 5.0e-47 191.8 139 66.9
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 2.1e-45 186.4 150 62.7
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 2.7e-45 186.0 199 50.8
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 3.6e-45 185.7 149 64.4
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 1.0e-44 184.1 165 55.2
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 1.0e-44 184.1 187 55.1
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 1.3e-42 177.2 130 70.0
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 1.8e-41 173.3 188 48.4
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 7.0e-41 171.4 152 58.6
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 9.1e-41 171.0 161 50.9
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 9.1e-41 171.0 161 50.9
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 5.9e-40 168.3 146 59.6
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 1.0e-39 167.5 177 52.5
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 1.5e-38 163.7 191 50.3
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 2.5e-38 162.9 111 70.3
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 4.2e-38 162.2 110 67.3
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 3.6e-37 159.1 120 65.0
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 1.4e-36 157.1 139 59.0
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 2.3e-36 156.4 121 66.1
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 1.2e-35 154.1 167 52.1
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 1.2e-35 154.1 118 67.8
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 2.0e-35 153.3 121 63.6
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 9.8e-35 151.0 119 64.7
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 4.8e-34 148.7 191 44.0
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 8.5e-31 137.9 120 55.8
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 2.1e-29 133.3 113 57.5
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 6.3e-26 121.7 105 57.1
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 5.4e-25 118.6 152 41.4
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 3.5e-24 115.9 151 41.1
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 2.9e-23 112.8 141 44.0
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 2.2e-18 96.7 134 40.3
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 1.0e-15 87.8 88 45.5
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 6.8e-12 75.1 153 30.1
C06p23580 Brassica napus HOM05D002744 ORTHO05D008989 4.9e-10 68.9 64 48.4
Psat5g125520 Pisum sativum HOM05D002744 ORTHO05D008989 3.2e-09 66.2 49 57.1
CAN.G118.19 Capsicum annuum HOM05D002744 ORTHO05D008989 2.3e-07 60.1 46 67.4


User provided reference genes

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