Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 3012.2 1501 100.0
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 2932.5 1501 97.4
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 0.0e+00 1816.2 1531 60.8
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 0.0e+00 1789.2 1525 60.5
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 0.0e+00 1743.8 1551 57.9
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 0.0e+00 1737.6 1412 63.5
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 0.0e+00 1713.0 1531 58.9
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 0.0e+00 1708.0 1517 57.8
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 0.0e+00 1685.6 1519 57.6
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 0.0e+00 1682.2 1567 57.4
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 0.0e+00 1675.2 1522 57.2
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 0.0e+00 1664.0 1556 56.7
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 0.0e+00 1663.3 1519 57.7
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 0.0e+00 1646.3 1516 56.3
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 0.0e+00 1644.0 1525 57.1
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 0.0e+00 1625.1 1523 56.3
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 0.0e+00 1618.2 1470 57.6
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 0.0e+00 1610.9 1513 55.7
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 0.0e+00 1605.5 1524 55.8
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 0.0e+00 1604.3 1479 58.0
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 0.0e+00 1600.1 1521 56.1
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1599.7 1538 55.5
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1599.3 1493 56.3
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1591.6 1521 55.7
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1591.6 1519 55.8
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1590.5 1539 54.8
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 0.0e+00 1586.2 1536 55.3
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 0.0e+00 1577.8 1523 55.5
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 0.0e+00 1567.4 1556 54.7
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1557.7 1617 51.8
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 0.0e+00 1537.7 1557 53.9
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1520.4 1609 51.3
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 0.0e+00 1517.7 1518 53.2
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 0.0e+00 1515.7 1553 53.1
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 0.0e+00 1511.9 1515 53.2
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 0.0e+00 1509.6 1530 52.7
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1507.7 1539 52.8
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 0.0e+00 1505.0 1534 52.2
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 0.0e+00 1503.8 1520 52.8
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1498.4 1531 52.7
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1496.5 1523 52.8
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 0.0e+00 1493.4 1540 52.7
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 0.0e+00 1491.9 1518 53.3
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 0.0e+00 1489.2 1528 52.2
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 0.0e+00 1488.8 1536 52.5
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1487.6 1528 52.4
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 0.0e+00 1487.2 1517 52.5
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 0.0e+00 1482.6 1536 52.0
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 0.0e+00 1478.4 1538 51.6
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 0.0e+00 1470.7 1532 52.5
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 0.0e+00 1467.2 1546 51.9
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1459.5 1526 51.6
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 0.0e+00 1458.0 1583 51.1
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 0.0e+00 1455.3 1534 51.5
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1454.9 1522 51.8
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 0.0e+00 1453.7 1517 52.0
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1453.7 1511 51.7
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 0.0e+00 1449.5 1580 50.8
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1449.1 1515 51.7
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 0.0e+00 1446.4 1512 51.7
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 0.0e+00 1435.2 1497 51.4
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 0.0e+00 1434.1 1485 52.4
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 0.0e+00 1433.7 1514 51.7
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1432.9 1507 50.6
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1432.5 1509 51.3
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1427.9 1507 51.4
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 0.0e+00 1422.9 1528 50.7
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1420.2 1522 50.0
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 0.0e+00 1415.6 1527 51.1
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 0.0e+00 1412.5 1511 50.9
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1407.1 1511 50.6
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1407.1 1511 50.6
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 1406.7 1530 50.3
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 0.0e+00 1404.0 1508 50.7
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 0.0e+00 1403.7 1543 49.5
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 0.0e+00 1401.0 1536 50.7
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 0.0e+00 1398.6 1530 50.0
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 1390.2 1527 50.0
Gohir.A02G105100 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1384.4 1351 55.4
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 0.0e+00 1380.5 1574 49.2
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 0.0e+00 1380.2 1517 50.0
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 0.0e+00 1375.1 1519 49.6
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 0.0e+00 1372.8 1522 49.9
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 0.0e+00 1371.3 1525 48.6
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 0.0e+00 1363.2 1538 49.5
Sed0010800 Sechium edule HOM05D006693 ORTHO05D008092 0.0e+00 1314.3 1408 50.9
Actinidia27362 Actinidia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1309.7 1350 53.3
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 0.0e+00 1286.2 1534 48.0
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 0.0e+00 1286.2 1550 46.8
ClCG07G007830 Citrullus lanatus HOM05D006693 ORTHO05D008092 0.0e+00 1270.0 1348 51.9
CsaV3_4G006130 Cucumis sativus L. HOM05D006693 ORTHO05D008092 0.0e+00 1246.9 1298 52.3
AL6G45560 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 0.0e+00 1196.0 1454 47.3
Zm00001eb382730 Zea mays HOM05D006693 ORTHO05D008092 0.0e+00 1167.5 1551 44.2
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 0.0e+00 1145.6 1130 54.5
Nitab4.5_0014092g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 3.9e-309 1065.4 1091 53.2
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 8.1e-275 951.4 1630 37.2
COL.COLO4_08357 Corchorus olitorius HOM05D006693 ORTHO05D008092 6.9e-274 948.3 997 51.4
CARHR255320 Cardamine hirsuta HOM05D006693 ORTHO05D008092 1.5e-207 728.0 905 45.7
SMO358G0585 Selaginella moellendorffii HOM05D006693 ORTHO05D008092 5.0e-184 649.8 1517 30.9
SEGI_35152 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 7.5e-180 636.0 1031 38.8
COL.COLO4_08358 Corchorus olitorius HOM05D006693 ORTHO05D008092 9.2e-178 629.0 483 65.6
Actinidia33729 Actinidia chinensis HOM05D006693 ORTHO05D008092 1.2e-177 628.6 483 67.1
Os06g0331300 Oryza sativa ssp. japonica HOM05D006693 ORTHO05D008092 1.5e-151 542.0 680 44.7
Cpa.g.sc180.1 Carica papaya HOM05D006693 ORTHO05D008092 2.1e-105 388.7 392 52.3
SEGI_07995 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 2.7e-84 318.5 593 35.4
FAN08G3186 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.7e-51 209.5 190 53.7
Cpa.g.sc180.2 Carica papaya HOM05D006693 ORTHO05D008092 1.3e-46 193.4 165 63.6
ClCG07G007840 Citrullus lanatus HOM05D006693 ORTHO05D008092 8.7e-35 154.1 107 63.6
Cpa.g.sc180.5 Carica papaya HOM05D006693 ORTHO05D008092 4.6e-28 131.7 91 61.5
SEGI_11223 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 4.8e-25 121.7 86 70.9
SEGI_38420 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 4.8e-25 121.7 86 70.9
Actinidia27361 Actinidia chinensis HOM05D006693 ORTHO05D008092 1.0e-22 114.0 107 53.3
CAN.G532.47 Capsicum annuum HOM05D006693 ORTHO05D008092 3.8e-22 112.1 93 55.9
Cpa.g.sc180.3 Carica papaya HOM05D006693 ORTHO05D008092 2.1e-20 106.3 81 66.7
Cpa.g.c42974 Carica papaya HOM05D006693 ORTHO05D008092 2.7e-20 105.9 98 54.1
Actinidia33728 Actinidia chinensis HOM05D006693 ORTHO05D008092 4.1e-16 92.0 67 79.1
Actinidia33727 Actinidia chinensis HOM05D006693 ORTHO05D008092 1.0e-06 60.8 87 42.5
Sabra01G0074000 Salix brachista HOM05D000115 ORTHO05D000464 3.8e-06 58.9 85 44.7


User provided reference genes

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