Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 5.5e-68 260.8 125 100.0
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 5.1e-66 254.2 125 97.6
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 8.2e-56 220.3 125 84.0
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 1.8e-55 219.2 125 83.2
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 5.5e-52 207.6 125 79.2
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 2.3e-50 202.2 125 76.0
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 6.7e-50 200.7 125 75.2
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 6.7e-50 200.7 125 75.2
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 8.8e-50 200.3 125 75.2
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 8.8e-50 200.3 125 75.2
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 1.2e-49 199.9 125 75.2
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 1.5e-49 199.5 125 76.0
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 1.5e-49 199.5 125 74.4
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 1.5e-49 199.5 125 72.0
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 2.0e-49 199.1 125 76.0
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 2.0e-49 199.1 125 76.0
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 2.0e-49 199.1 125 76.0
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 2.0e-49 199.1 125 75.2
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 3.3e-49 198.4 125 73.6
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 3.3e-49 198.4 125 74.4
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 3.3e-49 198.4 125 73.6
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 3.3e-49 198.4 125 73.6
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 4.4e-49 198.0 125 74.4
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 7.5e-49 197.2 125 73.6
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 7.5e-49 197.2 125 72.0
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 9.7e-49 196.8 124 75.0
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 1.3e-48 196.4 125 72.8
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 1.3e-48 196.4 125 73.6
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 1.7e-48 196.1 124 73.4
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 1.7e-48 196.1 124 73.4
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 2.2e-48 195.7 125 72.0
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 2.2e-48 195.7 125 74.4
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 2.2e-48 195.7 125 72.0
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 3.7e-48 194.9 125 73.6
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 3.7e-48 194.9 125 72.0
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 4.8e-48 194.5 125 72.8
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 4.8e-48 194.5 125 71.2
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 4.8e-48 194.5 125 72.8
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 4.8e-48 194.5 125 72.0
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 6.3e-48 194.1 125 71.2
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 6.3e-48 194.1 125 74.4
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 8.2e-48 193.7 125 71.2
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 8.2e-48 193.7 125 73.6
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 8.2e-48 193.7 125 71.2
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.4e-47 193.0 125 70.4
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 1.8e-47 192.6 125 73.6
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 1.8e-47 192.6 125 71.2
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 4.1e-47 191.4 125 71.2
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 5.3e-47 191.0 125 73.6
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 5.3e-47 191.0 125 73.6
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 5.3e-47 191.0 125 72.8
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 7.0e-47 190.7 125 70.4
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 9.1e-47 190.3 125 71.2
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 1.2e-46 189.9 125 72.0
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 2.0e-46 189.1 125 71.2
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 2.0e-46 189.1 125 72.8
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.0e-46 189.1 125 72.0
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.0e-46 189.1 125 72.8
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.0e-46 189.1 125 72.8
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 2.0e-46 189.1 125 72.8
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 2.7e-46 188.7 125 71.2
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 7.7e-46 187.2 132 68.2
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 7.7e-46 187.2 125 69.6
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 1.7e-45 186.0 125 71.2
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 2.2e-45 185.7 125 70.4
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.9e-45 185.3 137 65.0
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 1.1e-44 183.3 125 68.8
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 1.1e-44 183.3 125 68.0
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 2.5e-44 182.2 125 69.6
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 4.2e-44 181.4 125 70.4
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 7.2e-44 180.6 125 68.8
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 9.4e-44 180.3 125 69.6
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 1.2e-43 179.9 125 68.8
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 2.1e-43 179.1 125 68.0
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 3.6e-43 178.3 125 69.6
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 3.6e-43 178.3 125 69.6
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 3.6e-43 178.3 125 68.8
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 6.1e-43 177.6 125 70.4
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 2.3e-42 175.6 125 65.6
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 4.0e-42 174.9 125 68.8
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 4.0e-42 174.9 125 66.4
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 5.2e-42 174.5 122 63.9
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 6.8e-42 174.1 125 65.6
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 6.8e-42 174.1 125 68.0
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 2.6e-41 172.2 101 79.2
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 2.6e-41 172.2 123 64.2
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 2.6e-41 172.2 123 64.2
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 5.7e-41 171.0 125 63.2
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 7.5e-41 170.6 125 64.0
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 1.7e-40 169.5 125 66.4
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 2.8e-40 168.7 125 61.6
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 6.3e-40 167.5 108 69.4
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 8.3e-40 167.2 125 63.2
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 1.1e-39 166.8 150 57.3
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 1.4e-39 166.4 124 62.9
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 2.4e-39 165.6 204 46.6
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 3.1e-39 165.2 101 75.2
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 3.1e-39 165.2 172 51.7
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.0e-38 162.5 101 74.3
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 2.0e-38 162.5 125 61.6
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 2.7e-38 162.2 125 62.4
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 7.7e-38 160.6 125 60.8
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 2.3e-37 159.1 125 61.6
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 5.0e-37 157.9 120 61.7
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 6.5e-37 157.5 125 60.0
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 6.5e-37 157.5 125 60.0
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 6.5e-37 157.5 101 71.3
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 2.1e-35 152.5 121 60.3
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 3.6e-35 151.8 113 58.4
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 8.0e-35 150.6 126 59.5
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 5.2e-34 147.9 127 59.1
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 2.4e-23 112.5 81 64.2
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 2.4e-23 112.5 81 64.2
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 6.6e-21 104.4 81 59.3
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 4.7e-19 98.2 82 58.5
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 1.8e-18 96.3 108 49.1
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 6.8e-18 94.4 79 58.2
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 6.8e-18 94.4 79 58.2
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 1.5e-17 93.2 66 65.2
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.9e-16 89.0 57 64.9
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.9e-16 89.0 57 64.9
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.2e-14 83.6 68 64.7
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 1.0e-13 80.5 52 63.5
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 1.7e-13 79.7 57 61.4
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 4.3e-12 75.1 65 58.5
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 2.1e-11 72.8 45 77.8
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 4.7e-11 71.6 44 79.5
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 2.6e-09 65.9 44 77.3
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 4.6e-06 55.1 42 59.5


User provided reference genes

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