Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 2.8e-58 228.4 115 100.0
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 1.7e-55 219.2 115 95.7
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 5.5e-38 161.0 103 74.8
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 4.6e-37 157.9 106 68.9
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 1.8e-36 156.0 119 66.4
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 1.8e-36 156.0 109 65.1
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 2.3e-36 155.6 107 70.1
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 3.9e-36 154.8 114 63.2
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 3.9e-36 154.8 110 68.2
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 5.1e-36 154.5 108 71.3
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 6.7e-36 154.1 110 67.3
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 8.7e-36 153.7 111 65.8
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 1.1e-35 153.3 110 65.5
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.1e-35 153.3 110 66.4
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 1.5e-35 152.9 107 65.4
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 2.5e-35 152.1 110 64.5
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 2.5e-35 152.1 114 63.2
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 2.5e-35 152.1 114 63.2
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 4.3e-35 151.4 113 62.8
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 4.3e-35 151.4 114 64.9
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 1.6e-34 149.4 109 64.2
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 1.6e-34 149.4 109 64.2
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 1.6e-34 149.4 103 67.0
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 1.6e-34 149.4 100 69.0
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 2.1e-34 149.1 100 70.0
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 2.1e-34 149.1 101 71.3
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 2.8e-34 148.7 110 67.3
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 2.8e-34 148.7 110 64.5
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 3.7e-34 148.3 111 63.1
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 3.7e-34 148.3 108 66.7
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 4.8e-34 147.9 115 62.6
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 4.8e-34 147.9 104 66.3
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 8.1e-34 147.1 110 65.5
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 8.1e-34 147.1 105 64.8
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 1.4e-33 146.4 110 60.9
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.4e-33 146.4 111 62.2
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 1.8e-33 146.0 107 62.6
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 2.4e-33 145.6 117 60.7
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 2.4e-33 145.6 103 66.0
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 2.4e-33 145.6 103 66.0
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 3.1e-33 145.2 104 62.5
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 6.9e-33 144.1 108 63.0
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 1.5e-32 142.9 119 63.0
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 1.5e-32 142.9 110 63.6
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 1.5e-32 142.9 100 66.0
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 2.6e-32 142.1 118 61.9
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 2.6e-32 142.1 112 61.6
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 4.5e-32 141.4 115 57.4
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 4.5e-32 141.4 99 64.6
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 7.6e-32 140.6 112 60.7
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 1.7e-31 139.4 114 62.3
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 2.2e-31 139.0 103 68.0
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 2.2e-31 139.0 112 60.7
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 2.2e-31 139.0 107 64.5
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 3.8e-31 138.3 112 61.6
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 4.9e-31 137.9 112 60.7
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 4.9e-31 137.9 112 60.7
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 6.5e-31 137.5 111 57.7
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 6.5e-31 137.5 111 57.7
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 6.5e-31 137.5 111 57.7
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 6.5e-31 137.5 103 68.9
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 8.4e-31 137.1 109 62.4
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 1.1e-30 136.7 109 59.6
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 1.4e-30 136.3 115 58.3
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.9e-30 136.0 115 56.5
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 1.9e-30 136.0 111 61.3
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 3.2e-30 135.2 100 63.0
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 3.2e-30 135.2 109 61.5
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 3.2e-30 135.2 115 57.4
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 4.2e-30 134.8 108 61.1
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 4.2e-30 134.8 115 54.8
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 5.5e-30 134.4 103 61.2
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 5.5e-30 134.4 115 56.5
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 1.2e-29 133.3 99 61.6
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 2.7e-29 132.1 91 67.0
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 3.5e-29 131.7 116 56.0
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 4.6e-29 131.3 102 60.8
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 1.0e-28 130.2 111 57.7
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 1.3e-28 129.8 101 63.4
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 2.3e-28 129.0 104 56.7
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 2.3e-28 129.0 110 59.1
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 6.7e-28 127.5 99 64.6
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 8.7e-28 127.1 95 64.2
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 1.1e-27 126.7 95 60.0
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 1.1e-27 126.7 95 60.0
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.5e-27 126.3 101 58.4
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.5e-27 126.3 99 56.6
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 3.3e-27 125.2 150 46.7
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 5.7e-27 124.4 106 53.8
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 5.7e-27 124.4 83 68.7
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 7.4e-27 124.0 95 58.9
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 9.6e-27 123.6 87 69.0
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 2.1e-26 122.5 95 60.0
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 2.1e-26 122.5 95 60.0
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 2.8e-26 122.1 81 67.9
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 3.7e-26 121.7 99 54.5
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 4.8e-26 121.3 95 56.8
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 1.1e-25 120.2 107 57.9
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 1.4e-25 119.8 100 54.0
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 8.4e-23 110.5 68 79.4
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 1.9e-22 109.4 78 66.7
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 1.2e-21 106.7 72 69.4
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 2.7e-21 105.5 68 72.1
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 7.9e-21 104.0 72 66.7
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 3.9e-20 101.7 80 66.2
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 5.1e-20 101.3 108 47.2
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 3.3e-19 98.6 110 47.3
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 4.3e-19 98.2 66 68.2
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 3.1e-17 92.0 116 42.2
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 6.9e-17 90.9 98 45.9
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 9.0e-17 90.5 93 45.2
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 1.2e-16 90.1 97 46.4
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 2.0e-16 89.4 85 56.5
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 6.5e-15 84.3 66 57.6
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.5e-14 82.4 60 63.3
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 6.1e-13 77.8 104 44.2
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 4.8e-10 68.2 149 28.2
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 6.3e-10 67.8 64 56.2
MCO09G076 Micromonas commoda HOM05D006879 ORTHO05D008452 1.1e-06 57.0 71 43.7


User provided reference genes

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