Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0250 Papaver somniferum HOM05D003962 ORTHO05D004714 0.0e+00 2312.3 1359 100.0
PSO063G5170 Papaver somniferum HOM05D003962 ORTHO05D004714 0.0e+00 2159.8 1360 90.4
Nn1g01866 Nelumbo nucifera HOM05D003962 ORTHO05D004714 1.5e-206 724.5 999 48.6
TAR374G0911 Trochodendron aralioides HOM05D003962 ORTHO05D004714 5.6e-190 669.5 1009 47.3
Nn3g19007 Nelumbo nucifera HOM05D003962 ORTHO05D004714 1.1e-185 655.2 1000 46.1
TAR636G0021 Trochodendron aralioides HOM05D003962 ORTHO05D004714 8.6e-175 619.0 1031 45.7
Dinv38828 Davidia involucrata HOM05D003962 ORTHO05D004714 4.6e-168 596.7 1131 40.9
Aqoxy7G00097 Aquilegia oxysepala HOM05D003962 ORTHO05D004714 2.2e-154 551.2 1018 43.2
GSVIVG01019537001 Vitis vinifera HOM05D003962 ORTHO05D005685 5.4e-153 546.6 1008 42.4
Lj2A167T45 Lonicera japonica HOM05D003962 ORTHO05D004714 6.2e-149 533.1 1136 38.9
TAR629G3347 Trochodendron aralioides HOM05D003962 ORTHO05D004714 5.5e-137 493.4 607 49.4
CSS0043367 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 4.6e-136 490.3 1165 34.3
Dinv37529 Davidia involucrata HOM05D003962 ORTHO05D004714 1.0e-130 472.6 919 39.4
MBI07_g07101_MAGBIO Magnolia biondii HOM05D003962 ORTHO05D004714 2.5e-126 458.0 987 39.8
MBI06_g08468_MAGBIO Magnolia biondii HOM05D003962 ORTHO05D004714 5.3e-124 450.3 1081 36.5
GSVIVG01038709001 Vitis vinifera HOM05D003962 ORTHO05D004714 1.7e-117 428.7 1129 34.6
Hma1.2p1_0359F.1_g135210 Hydrangea macrophylla HOM05D003962 ORTHO05D004714 7.0e-116 423.3 1208 33.1
DCAR_029893 Daucus carota HOM05D003962 ORTHO05D004714 1.5e-110 405.6 1102 35.1
COL.COLO4_11264 Corchorus olitorius HOM05D003962 ORTHO05D004714 1.6e-107 395.6 839 38.5
Cc08_g16110 Coffea canephora HOM05D003962 ORTHO05D004714 5.0e-106 390.6 1160 32.2
CiPaw.05G251700 Carya illinoinensis HOM05D003962 ORTHO05D004714 6.5e-106 390.2 1073 34.5
TWI23G0430 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 2.5e-105 388.3 1061 35.2
QL09p009481 Quercus lobata HOM05D003962 ORTHO05D004714 3.2e-105 387.9 1153 32.5
Solyc08g082410.4 Solanum lycopersicum HOM05D003962 ORTHO05D004714 1.2e-104 386.0 1147 32.2
Oeu054025.1 Olea europaea HOM05D003962 ORTHO05D004714 5.2e-103 380.6 1027 33.7
PGSC0003DMG400012278 Solanum tuberosum HOM05D003962 ORTHO05D004714 8.8e-103 379.8 1152 32.2
Actinidia04199 Actinidia chinensis HOM05D003962 ORTHO05D004714 3.4e-102 377.9 1189 32.8
MD01G1219900 Malus domestica HOM05D003962 ORTHO05D004714 9.8e-102 376.3 1058 34.1
TWI14G0330 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 1.7e-101 375.6 1066 34.1
CSS0016674 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 3.5e-99 367.9 554 40.8
Cfa016250 Carpinus fangiana HOM05D003962 ORTHO05D004714 1.0e-98 366.3 1079 33.1
Oeu009961.1 Olea europaea HOM05D003962 ORTHO05D004714 1.7e-98 365.5 1035 33.3
TAR375G1139 Trochodendron aralioides HOM05D003962 ORTHO05D004714 2.9e-98 364.8 479 47.0
Duzib084G0525 Durio zibethinus HOM05D003962 ORTHO05D004714 3.8e-98 364.4 1071 31.5
Migut.A00639 Erythranthe guttata HOM05D003962 ORTHO05D004714 6.5e-98 363.6 1142 32.3
Haze_00190 Corylus avellana HOM05D003962 ORTHO05D004714 1.1e-97 362.8 795 37.2
MD07G1290200 Malus domestica HOM05D003962 ORTHO05D004714 9.4e-97 359.8 610 39.5
Prupe.2G311300 Prunus persica HOM05D003962 ORTHO05D004714 1.6e-96 359.0 1065 33.2
Thecc.03G196300 Theobroma cacao HOM05D003962 ORTHO05D004714 1.0e-95 356.3 1077 32.4
Potri.012G013800 Populus trichocarpa HOM05D003962 ORTHO05D004714 6.8e-95 353.6 1033 33.3
Manes.14G006600 Manihot esculenta HOM05D003962 ORTHO05D004714 2.0e-94 352.1 603 38.6
Duzib205G1946 Durio zibethinus HOM05D003962 ORTHO05D004714 5.7e-94 350.5 1077 31.7
PSO384G0521 Papaver somniferum HOM05D003962 ORTHO05D004714 5.7e-94 350.5 811 38.1
CiPaw.06G010000 Carya illinoinensis HOM05D003962 ORTHO05D004714 1.3e-93 349.4 1083 34.0
CAN.G1804.9 Capsicum annuum HOM05D003962 ORTHO05D004714 2.2e-93 348.6 1201 30.7
PSO135G0074 Papaver somniferum HOM05D003962 ORTHO05D004714 2.2e-93 348.6 1051 35.3
MSTRG.25678 Avicennia marina HOM05D003962 ORTHO05D004714 4.9e-93 347.4 1172 29.9
Sabra15G0011900 Salix brachista HOM05D003962 ORTHO05D004714 4.9e-93 347.4 855 35.9
CANSAT21G2091 Cannabis sativa HOM05D003962 ORTHO05D004714 8.3e-93 346.7 1073 32.6
Duzib068G0757 Durio zibethinus HOM05D003962 ORTHO05D004714 8.3e-93 346.7 1067 32.3
Actinidia22731 Actinidia chinensis HOM05D003962 ORTHO05D004714 1.1e-92 346.3 570 39.5
EL10Ac3g05299 Beta vulgaris HOM05D003962 ORTHO05D004714 1.4e-92 345.9 1128 31.5
Atru.chr1.164 Acer truncatum HOM05D003962 ORTHO05D004714 1.8e-92 345.5 1087 34.4
Sabra12G0018000 Salix brachista HOM05D003962 ORTHO05D004714 2.4e-92 345.1 1042 33.3
Actinidia27315 Actinidia chinensis HOM05D003962 ORTHO05D004714 3.1e-92 344.7 991 33.8
Cpa.g.sc3.71 Carica papaya HOM05D003962 ORTHO05D004714 1.2e-91 342.8 1089 32.3
Duzib205G1416 Durio zibethinus HOM05D003962 ORTHO05D004714 3.5e-91 341.3 608 38.5
TWI39G0414 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 1.7e-90 339.0 1072 32.9
Peaxi162Scf00074g00821 Petunia axillaris HOM05D003962 ORTHO05D004714 8.6e-90 336.7 1149 31.9
Ciclev10004179m.g Citrus clementina HOM05D003962 ORTHO05D004714 2.1e-88 332.0 1079 32.6
FvH4_7g31740 Fragaria vesca HOM05D003962 ORTHO05D004714 2.1e-88 332.0 1093 32.2
VMungo1309G1284 Vigna mungo HOM05D003962 ORTHO05D004714 1.4e-87 329.3 1044 32.4
FAN06G4429 Fragaria x ananassa HOM05D003962 ORTHO05D004714 1.8e-87 328.9 1093 32.0
Potri.015G014800 Populus trichocarpa HOM05D003962 ORTHO05D004714 2.3e-87 328.6 1020 33.0
Gorai.007G015000 Gossypium raimondii HOM05D003962 ORTHO05D004714 3.0e-87 328.2 1065 32.0
FAN06G4230 Fragaria x ananassa HOM05D003962 ORTHO05D004714 6.8e-87 327.0 1093 31.9
Eucgr.A01465 Eucalyptus grandis HOM05D003962 ORTHO05D004714 1.5e-86 325.9 1073 30.8
Ca_16697_v3 Cicer arietinum L. HOM05D003962 ORTHO05D004714 2.0e-86 325.5 965 34.1
FAN10G3613 Fragaria x ananassa HOM05D003962 ORTHO05D004714 2.6e-86 325.1 1089 31.5
Gohir.D11G014600 Gossypium hirsutum HOM05D003962 ORTHO05D004714 4.4e-86 324.3 1051 32.3
MSTRG.13886 Avicennia marina HOM05D003962 ORTHO05D004714 7.5e-86 323.6 1159 30.5
FAN10G2253 Fragaria x ananassa HOM05D003962 ORTHO05D004714 2.9e-85 321.6 1089 31.4
Glyma.04G236700 Glycine max HOM05D003962 ORTHO05D004714 1.8e-84 318.9 1031 32.5
SalBow1G2835 Salvia bowleyana HOM05D003962 ORTHO05D004714 1.8e-84 318.9 1229 29.8
SalBow1G4038 Salvia bowleyana HOM05D003962 ORTHO05D004714 1.8e-84 318.9 1229 29.8
Rhsim02G0244100 Rhododendron simsii HOM05D003962 ORTHO05D004714 4.1e-84 317.8 1250 29.8
Oeu063516.1 Olea europaea HOM05D003962 ORTHO05D004714 3.5e-83 314.7 1166 31.6
Glyma.06G127600 Glycine max HOM05D003962 ORTHO05D004714 1.3e-82 312.8 1027 32.4
Nitab4.5_0007367g0070 Nicotiana tabacum HOM05D003962 ORTHO05D004714 1.7e-82 312.4 1120 30.1
CSS0006905 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 5.0e-82 310.8 456 42.1
ECA246G1296 Erigeron canadensis HOM05D003962 ORTHO05D004714 8.6e-82 310.1 1073 31.8
RcHm_v2.0_Chr1g0380961 Rosa chinensis HOM05D003962 ORTHO05D004714 7.3e-81 307.0 1087 31.6
Gohir.A11G014600 Gossypium hirsutum HOM05D003962 ORTHO05D004714 4.7e-80 304.3 1058 31.0
Nitab4.5_0002944g0030 Nicotiana tabacum HOM05D003962 ORTHO05D004714 4.7e-80 304.3 1130 30.3
vmacro11467 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 1.8e-79 302.4 1240 29.6
FAN01G0781 Fragaria x ananassa HOM05D003962 ORTHO05D004714 2.3e-79 302.0 1052 31.2
FAN03G1461 Fragaria x ananassa HOM05D003962 ORTHO05D004714 5.2e-79 300.8 1055 30.8
AUR62006109 Chenopodium quinoa HOM05D003962 ORTHO05D004714 1.2e-78 299.7 987 33.8
Sed0023111 Sechium edule HOM05D003962 ORTHO05D004714 1.5e-78 299.3 1045 29.9
Lj1g0008504 Lotus japonicus HOM05D003962 ORTHO05D004714 9.8e-78 296.6 1039 32.1
Gohir.A11G014500 Gossypium hirsutum HOM05D003962 ORTHO05D004714 1.7e-77 295.8 1058 30.3
AUR62019379 Chenopodium quinoa HOM05D003962 ORTHO05D004714 3.2e-76 291.6 988 33.2
HanXRQChr17g0534811 Helianthus annuus HOM05D003962 ORTHO05D004714 5.4e-76 290.8 1056 33.2
SGA_v2.0_scaffold305G47981 Striga asiatica HOM05D003962 ORTHO05D004714 9.2e-76 290.0 1160 30.6
Gohir.D11G014700 Gossypium hirsutum HOM05D003962 ORTHO05D004714 1.6e-75 289.3 1064 30.3
Medtr3g091280 Medicago truncatula HOM05D003962 ORTHO05D004714 3.5e-75 288.1 992 30.9
ATR0602G039 Amborella trichopoda HOM05D003962 ORTHO05D004714 1.3e-74 286.2 792 34.3
Psat5g078120 Pisum sativum HOM05D003962 ORTHO05D004714 7.3e-73 280.4 1034 31.0
CsaV3_5G000540 Cucumis sativus L. HOM05D003962 ORTHO05D004714 6.2e-72 277.3 1065 28.5
Manes.06G159800 Manihot esculenta HOM05D003962 ORTHO05D004714 1.4e-71 276.2 1036 29.6
Rhsim02G0244200 Rhododendron simsii HOM05D003962 ORTHO05D004714 2.3e-71 275.4 1244 30.4
ClCG01G000470 Citrullus lanatus HOM05D003962 ORTHO05D004714 6.8e-71 273.9 1056 29.0
Lalb_Chr08g0240331 Lupinus albus HOM05D003962 ORTHO05D004714 8.9e-71 273.5 1028 31.2
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 1.2e-70 273.1 1165 30.2
MELO3C005882.2 Cucumis melo HOM05D003962 ORTHO05D004714 1.5e-70 272.7 1090 28.3
Gorai.007G015100 Gossypium raimondii HOM05D003962 ORTHO05D004714 1.7e-69 269.2 452 39.6
Ah.13g070110 Amaranthus hybridus HOM05D003962 ORTHO05D004714 2.9e-69 268.5 1088 30.4
arahy.Tifrunner.gnm1.ann1.JYM9I0 Arachis hypogaea HOM05D003962 ORTHO05D004714 1.1e-68 266.5 1036 30.6
PGR042G1008 Punica granatum HOM05D003962 ORTHO05D004714 4.1e-68 264.6 999 32.3
Zm00001eb359440 Zea mays HOM05D003962 ORTHO05D004714 1.2e-67 263.1 1046 27.9
THA.LOC104800296 Tarenaya hassleriana HOM05D003962 ORTHO05D004714 1.6e-67 262.7 1088 27.3
arahy.Tifrunner.gnm1.ann1.897SEY Arachis hypogaea HOM05D003962 ORTHO05D004714 6.6e-66 257.3 1034 30.2
Phvul.009G053600 Phaseolus vulgaris HOM05D003962 ORTHO05D004714 9.5e-65 253.4 999 28.9
Lalb_Chr23g0271551 Lupinus albus HOM05D003962 ORTHO05D004714 3.6e-64 251.5 1031 29.4
Oeu058004.1 Olea europaea HOM05D003962 ORTHO05D004714 2.0e-62 245.7 967 30.0
Sc19g0000840 Simmondsia chinensis HOM05D003962 ORTHO05D004714 2.0e-62 245.7 1054 29.1
TPR.G17287 Trifolium pratense HOM05D003962 ORTHO05D004714 1.6e-59 236.1 963 30.4
Sed0017272 Sechium edule HOM05D003962 ORTHO05D004714 2.3e-58 232.3 630 30.8
Sc25g0000880 Simmondsia chinensis HOM05D003962 ORTHO05D004714 2.1e-56 225.7 1075 29.1
Os01g0655400 Oryza sativa ssp. japonica HOM05D003962 ORTHO05D004714 3.6e-56 224.9 1061 28.2
Lsat_1_v5_gn_3_10880 Lactuca sativa HOM05D003962 ORTHO05D004714 2.4e-55 222.2 1065 30.5
AL8G28140 Arabidopsis lyrata HOM05D003962 ORTHO05D004714 3.1e-55 221.9 1047 29.0
AT5G53440 Arabidopsis thaliana HOM05D003962 ORTHO05D004714 8.9e-55 220.3 1057 28.8
BcaC01g06252 Brassica carinata HOM05D003962 ORTHO05D004714 1.2e-54 219.9 499 34.5
vmacro11361 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 1.2e-54 219.9 519 34.1
A03p15150 Brassica napus HOM05D003962 ORTHO05D004714 2.0e-54 219.2 499 34.3
TAR375G1118 Trochodendron aralioides HOM05D003962 ORTHO05D004714 2.0e-54 219.2 471 45.0
Ah.07g205820 Amaranthus hybridus HOM05D003962 ORTHO05D004714 1.3e-53 216.5 1175 26.4
C03p17680 Brassica napus HOM05D003962 ORTHO05D004714 1.7e-53 216.1 554 33.0
BolC3t14179H Brassica oleracea HOM05D003962 ORTHO05D004714 1.7e-53 216.1 554 33.0
CDE10G0926 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 1.7e-53 216.1 987 28.1
Sp6g15570 Schrenkiella parvula HOM05D003962 ORTHO05D004714 2.2e-53 215.7 1044 28.5
THA.LOC104825141 Tarenaya hassleriana HOM05D003962 ORTHO05D004714 2.2e-53 215.7 980 30.1
HanXRQChr06g0166431 Helianthus annuus HOM05D003962 ORTHO05D004714 3.8e-53 214.9 1041 30.4
HPP92_024026 Vanilla planifolia HOM05D003962 ORTHO05D004714 3.8e-53 214.9 1014 30.0
BraA03t10810Z Brassica rapa HOM05D003962 ORTHO05D004714 4.9e-53 214.5 506 33.6
BcaNung06205 Brassica carinata HOM05D003962 ORTHO05D004714 1.9e-52 212.6 553 32.5
Lalb_Chr11g0066791 Lupinus albus HOM05D003962 ORTHO05D004714 1.6e-51 209.5 1032 28.5
Prupe.5G120600 Prunus persica HOM05D003962 ORTHO05D004714 6.0e-51 207.6 1158 26.3
Carub.0008s1360 Capsella rubella HOM05D003962 ORTHO05D004714 4.8e-48 198.0 1052 27.5
Aa31sc139G70 Aethionema arabicum HOM05D003962 ORTHO05D004714 6.9e-47 194.1 1062 27.5
SHI02385 Sapria himalayana HOM05D003962 ORTHO05D004714 1.2e-46 193.4 452 32.7
Zm00001eb158050 Zea mays HOM05D003962 ORTHO05D004714 2.6e-46 192.2 1094 27.6
CDE10G1062 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 3.8e-45 188.3 833 26.8
Thhalv10012484m.g Eutrema salsugineum HOM05D003962 ORTHO05D004714 1.1e-44 186.8 1000 26.9
CARHR266560 Cardamine hirsuta HOM05D003962 ORTHO05D004714 1.0e-42 180.3 1058 27.0
CDE09G1087 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 9.9e-38 163.7 956 26.9
DCAR_006489 Daucus carota HOM05D003962 ORTHO05D004714 6.4e-37 161.0 1133 26.6
Nitab4.5_0001210g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 7.1e-36 157.5 1040 26.8
CDE02G1812 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 2.5e-33 149.1 1003 27.2
Nitab4.5_0006775g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 2.8e-32 145.6 1035 27.5
TAR629G3239 Trochodendron aralioides HOM05D003962 ORTHO05D004714 2.4e-31 142.5 250 47.2
unitig_0.g2842 Utricularia gibba HOM05D003962 ORTHO05D004714 4.0e-31 141.7 976 25.6
unitig_88.g27642 Utricularia gibba HOM05D003962 ORTHO05D004714 1.7e-29 136.3 583 29.2
vmacro11466 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 1.8e-26 126.3 361 39.3
Thhalv10026934m.g Eutrema salsugineum HOM05D003962 ORTHO05D004714 3.3e-25 122.1 487 28.7
ATR1089G043 Amborella trichopoda HOM05D003962 ORTHO05D004714 1.3e-24 120.2 788 28.4
vmacro11360 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 9.3e-20 104.0 373 35.4
SEGI_41344 Sequoiadendron giganteum HOM05D003962 ORTHO05D004714 1.6e-16 93.2 369 26.8
SEGI_14221 Sequoiadendron giganteum HOM05D003962 ORTHO05D004714 1.1e-15 90.5 1128 24.1
ECA233G2741 Erigeron canadensis HOM05D003962 ORTHO05D004714 1.2e-14 87.0 848 24.9
HanXRQChr07g0190851 Helianthus annuus HOM05D003962 ORTHO05D004714 3.4e-06 58.9 194 27.8


User provided reference genes

Program Settings