Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0149 Papaver somniferum HOM05D007042 ORTHO05D008441 5.0e-111 404.4 204 100.0
PSO063G2627 Papaver somniferum HOM05D007042 ORTHO05D008441 3.2e-105 385.2 204 96.1
TAR633G0993 Trochodendron aralioides HOM05D007042 ORTHO05D008441 6.4e-58 228.0 194 62.4
Aqoxy5G00144 Aquilegia oxysepala HOM05D007042 ORTHO05D008441 1.3e-55 220.3 195 58.5
Hma1.2p1_2139F.1_g314960 Hydrangea macrophylla HOM05D007042 ORTHO05D008441 1.8e-52 209.9 202 56.9
Nn1g02976 Nelumbo nucifera HOM05D007042 ORTHO05D008441 4.0e-52 208.8 194 55.7
Dinv16402 Davidia involucrata HOM05D007042 ORTHO05D008441 6.9e-52 208.0 203 56.7
Dinv43069 Davidia involucrata HOM05D007042 ORTHO05D008441 9.0e-52 207.6 207 56.5
Cc02_g07760 Coffea canephora HOM05D007042 ORTHO05D008441 3.4e-51 205.7 197 59.4
Haze_24706 Corylus avellana HOM05D007042 ORTHO05D008441 5.8e-51 204.9 203 55.2
arahy.Tifrunner.gnm1.ann1.T4WIMW Arachis hypogaea HOM05D007042 ORTHO05D008441 3.8e-50 202.2 177 57.6
arahy.Tifrunner.gnm1.ann1.UI445S Arachis hypogaea HOM05D007042 ORTHO05D008441 3.8e-50 202.2 177 58.2
CSS0015019 Camellia sinensis var. sinensis HOM05D007042 ORTHO05D008441 4.9e-50 201.8 203 55.2
GSVIVG01028431001 Vitis vinifera HOM05D007042 ORTHO05D008441 4.9e-50 201.8 183 57.4
CiPaw.04G190700 Carya illinoinensis HOM05D007042 ORTHO05D008441 8.4e-50 201.1 204 55.9
Oeu048243.1 Olea europaea HOM05D007042 ORTHO05D008441 8.4e-50 201.1 206 55.8
Cfa002484 Carpinus fangiana HOM05D007042 ORTHO05D008441 1.1e-49 200.7 179 58.1
Nitab4.5_0010166g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 3.2e-49 199.1 203 54.2
Nitab4.5_0013552g0010 Nicotiana tabacum HOM05D007042 ORTHO05D008441 3.2e-49 199.1 199 54.3
Potri.002G256700 Populus trichocarpa HOM05D007042 ORTHO05D008441 3.2e-49 199.1 204 55.4
Thecc.01G250400 Theobroma cacao HOM05D007042 ORTHO05D008441 4.2e-49 198.7 199 54.3
CiPaw.03G270900 Carya illinoinensis HOM05D007042 ORTHO05D008441 5.5e-49 198.4 203 53.7
Migut.F00782 Erythranthe guttata HOM05D007042 ORTHO05D008441 5.5e-49 198.4 204 54.9
HanXRQChr15g0468211 Helianthus annuus HOM05D007042 ORTHO05D008441 5.5e-49 198.4 185 56.2
PGSC0003DMG400027743 Solanum tuberosum HOM05D007042 ORTHO05D008441 9.3e-49 197.6 199 54.8
CAN.G786.8 Capsicum annuum HOM05D007042 ORTHO05D008441 4.6e-48 195.3 176 59.7
Solyc04g011530.3 Solanum lycopersicum HOM05D007042 ORTHO05D008441 4.6e-48 195.3 203 54.2
Manes.12G044501 Manihot esculenta HOM05D007042 ORTHO05D008441 6.0e-48 194.9 192 54.7
Actinidia09516 Actinidia chinensis HOM05D007042 ORTHO05D008441 1.0e-47 194.1 203 53.2
MD05G1188900 Malus domestica HOM05D007042 ORTHO05D008441 1.0e-47 194.1 199 51.8
Lj1A74G98 Lonicera japonica HOM05D007042 ORTHO05D008441 1.8e-47 193.4 206 53.4
ClCG06G001410 Citrullus lanatus HOM05D007042 ORTHO05D008441 2.3e-47 193.0 169 58.6
Ciclev10022455m.g Citrus clementina HOM05D007042 ORTHO05D008441 2.3e-47 193.0 199 53.3
CsaV3_6G007350 Cucumis sativus L. HOM05D007042 ORTHO05D008441 2.3e-47 193.0 173 57.2
SalBow3G0444 Salvia bowleyana HOM05D007042 ORTHO05D008441 2.3e-47 193.0 205 54.6
Lsat_1_v5_gn_9_11480 Lactuca sativa HOM05D007042 ORTHO05D008441 3.0e-47 192.6 198 53.0
Sopen04g005710 Solanum pennellii HOM05D007042 ORTHO05D008441 3.9e-47 192.2 203 53.7
CDE06G0115 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 5.1e-47 191.8 183 56.3
HPP92_014817 Vanilla planifolia HOM05D007042 ORTHO05D008441 5.1e-47 191.8 191 55.5
Eucgr.H04779 Eucalyptus grandis HOM05D007042 ORTHO05D008441 6.7e-47 191.4 178 55.6
RcHm_v2.0_Chr6g0286631 Rosa chinensis HOM05D007042 ORTHO05D008441 6.7e-47 191.4 203 50.7
Cpa.g.sc87.28 Carica papaya HOM05D007042 ORTHO05D008441 8.7e-47 191.0 153 59.5
ECA247G0849 Erigeron canadensis HOM05D007042 ORTHO05D008441 8.7e-47 191.0 205 52.7
Prupe.8G215500 Prunus persica HOM05D007042 ORTHO05D008441 8.7e-47 191.0 199 52.3
PGR031G2106 Punica granatum HOM05D007042 ORTHO05D008441 1.5e-46 190.3 193 55.4
MD10G1176500 Malus domestica HOM05D007042 ORTHO05D008441 1.9e-46 189.9 176 55.7
Medtr7g098470 Medicago truncatula HOM05D007042 ORTHO05D008441 2.5e-46 189.5 165 58.2
Rhsim01G0260600 Rhododendron simsii HOM05D007042 ORTHO05D008441 3.3e-46 189.1 148 62.8
Sed0010391 Sechium edule HOM05D007042 ORTHO05D008441 4.3e-46 188.7 174 54.6
Glyma.19G168400 Glycine max HOM05D007042 ORTHO05D008441 7.4e-46 188.0 169 55.6
THA.LOC104814528 Tarenaya hassleriana HOM05D007042 ORTHO05D008441 7.4e-46 188.0 176 54.0
vmacro14796 Vaccinium macrocarpon HOM05D007042 ORTHO05D008441 7.4e-46 188.0 203 52.7
Lalb_Chr20g0113621 Lupinus albus HOM05D007042 ORTHO05D008441 9.6e-46 187.6 186 54.3
Atru.chr5.1857 Acer truncatum HOM05D007042 ORTHO05D008441 1.3e-45 187.2 179 52.5
Gohir.A07G152300 Gossypium hirsutum HOM05D007042 ORTHO05D008441 1.3e-45 187.2 199 51.3
MELO3C022392.2 Cucumis melo HOM05D007042 ORTHO05D008441 2.8e-45 186.0 173 55.5
Duzib133G0775 Durio zibethinus HOM05D007042 ORTHO05D008441 2.8e-45 186.0 150 59.3
Gorai.001G181700 Gossypium raimondii HOM05D007042 ORTHO05D008441 2.8e-45 186.0 199 50.8
Psat3g054000 Pisum sativum HOM05D007042 ORTHO05D008441 2.8e-45 186.0 152 59.2
Phvul.001G164800 Phaseolus vulgaris HOM05D007042 ORTHO05D008441 3.7e-45 185.7 187 53.5
Sp3g33630 Schrenkiella parvula HOM05D007042 ORTHO05D008441 3.7e-45 185.7 147 61.2
VMungo1383G0900 Vigna mungo HOM05D007042 ORTHO05D008441 4.8e-45 185.3 187 52.9
ATR0787G115 Amborella trichopoda HOM05D007042 ORTHO05D008441 8.2e-45 184.5 183 55.2
AT2G20390 Arabidopsis thaliana HOM05D007042 ORTHO05D008441 8.2e-45 184.5 167 54.5
A07p00340 Brassica napus HOM05D007042 ORTHO05D008441 8.2e-45 184.5 172 54.7
BraA07t27825Z Brassica rapa HOM05D007042 ORTHO05D008441 8.2e-45 184.5 172 54.7
Lj1g0019034 Lotus japonicus HOM05D007042 ORTHO05D008441 1.1e-44 184.1 181 53.0
TWI18G1052 Tripterygium wilfordii HOM05D007042 ORTHO05D008441 1.4e-44 183.7 171 55.0
BcaB03g16831 Brassica carinata HOM05D007042 ORTHO05D008441 1.8e-44 183.3 193 49.7
Thhalv10002102m.g Eutrema salsugineum HOM05D007042 ORTHO05D008441 1.8e-44 183.3 175 53.7
FvH4_2g20510 Fragaria vesca HOM05D007042 ORTHO05D008441 1.8e-44 183.3 181 49.7
Gohir.D07G158500 Gossypium hirsutum HOM05D007042 ORTHO05D008441 1.8e-44 183.3 199 50.3
AL3G53360 Arabidopsis lyrata HOM05D007042 ORTHO05D008441 2.4e-44 183.0 173 53.8
CARHR110910 Cardamine hirsuta HOM05D007042 ORTHO05D008441 2.4e-44 183.0 163 57.1
Ca_08743_v3 Cicer arietinum L. HOM05D007042 ORTHO05D008441 3.1e-44 182.6 160 57.5
Peaxi162Scf00760g00324 Petunia axillaris HOM05D007042 ORTHO05D008441 3.1e-44 182.6 161 60.2
Glyma.03G167300 Glycine max HOM05D007042 ORTHO05D008441 4.1e-44 182.2 179 53.6
Carub.0003s3477 Capsella rubella HOM05D007042 ORTHO05D008441 5.3e-44 181.8 183 50.3
BcaC06g36726 Brassica carinata HOM05D007042 ORTHO05D008441 6.9e-44 181.4 172 54.1
C07p00700 Brassica napus HOM05D007042 ORTHO05D008441 6.9e-44 181.4 172 54.1
BolC7t40512H Brassica oleracea HOM05D007042 ORTHO05D008441 6.9e-44 181.4 172 54.1
Aa31LG8G17370 Aethionema arabicum HOM05D007042 ORTHO05D008441 2.0e-43 179.9 147 59.2
SGA_v2.0_scaffold94G28473 Striga asiatica HOM05D007042 ORTHO05D008441 2.6e-43 179.5 186 51.1
AUR62025440 Chenopodium quinoa HOM05D007042 ORTHO05D008441 6.5e-42 174.9 176 50.0
FAN15G2210 Fragaria x ananassa HOM05D007042 ORTHO05D008441 8.5e-42 174.5 153 53.6
FAN24G0975 Fragaria x ananassa HOM05D003075 ORTHO05D003430 8.5e-42 174.5 153 53.6
Sc17g0002810 Simmondsia chinensis HOM05D007042 ORTHO05D008441 8.5e-42 174.5 173 49.7
AUR62008799 Chenopodium quinoa HOM05D007042 ORTHO05D008441 2.5e-41 172.9 169 51.5
EL10Ac7g17687 Beta vulgaris HOM05D007042 ORTHO05D008441 2.1e-40 169.9 157 52.9
Actinidia27524 Actinidia chinensis HOM05D007042 ORTHO05D008441 6.1e-40 168.3 147 59.2
FAN27G0500 Fragaria x ananassa HOM05D007042 ORTHO05D008441 7.9e-40 167.9 144 54.9
QL09p041460 Quercus lobata HOM05D007042 ORTHO05D008441 1.3e-39 167.2 282 38.3
SHI26738 Sapria himalayana HOM05D007042 ORTHO05D008441 1.8e-39 166.8 167 49.1
Hund05486 Selenicereus undatus HOM05D000914 ORTHO05D000718 3.0e-39 166.0 162 49.4
Sabra02G0195200 Salix brachista HOM05D007042 ORTHO05D008441 3.1e-36 156.0 141 60.3
Zm00001eb307520 Zea mays HOM05D007042 ORTHO05D008441 2.2e-34 149.8 149 49.7
TPR.G20062 Trifolium pratense HOM05D007042 ORTHO05D008441 5.0e-34 148.7 128 60.9
Actinidia23697 Actinidia chinensis HOM05D007042 ORTHO05D008441 2.5e-33 146.4 205 44.9
COL.COLO4_03573 Corchorus olitorius HOM05D007042 ORTHO05D008441 5.5e-33 145.2 110 62.7
Zm00001eb088930 Zea mays HOM05D007042 ORTHO05D008441 2.1e-32 143.3 162 43.2
SEGI_30132 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 1.8e-31 140.2 180 42.8
CDE04G2760 Ceratophyllum demersum HOM05D007042 ORTHO05D008441 8.2e-29 131.3 92 67.4
Os02g0754800 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 8.2e-29 131.3 100 62.0
FAN27G0749 Fragaria x ananassa HOM05D003075 ORTHO05D003430 2.4e-28 129.8 104 58.7
Os04g0129600 Oryza sativa ssp. japonica HOM05D007042 ORTHO05D008441 7.7e-27 124.8 109 51.4
SHI06358 Sapria himalayana HOM05D007042 ORTHO05D008441 3.6e-24 115.9 106 50.9
AagrBONN_evm.TU.Sc2ySwM_228.1144 Anthoceros agrestis HOM05D007042 ORTHO05D008441 3.3e-22 109.4 146 41.1
SEGI_30900 Sequoiadendron giganteum HOM05D007042 ORTHO05D008441 1.6e-19 100.5 100 49.0
Mapoly0078s0039 Marchantia polymorpha HOM05D007042 ORTHO05D008441 8.5e-18 94.7 142 43.0
SMO116G0088 Selaginella moellendorffii HOM05D001526 ORTHO05D008441 1.6e-16 90.5 132 37.9
Pp3c18_10950 Physcomitrium patens HOM05D007042 ORTHO05D008441 1.7e-13 80.5 139 36.0
TPR.G20307 Trifolium pratense HOM05D007042 ORTHO05D008441 5.9e-11 72.0 60 56.7
Cre13.g604300 Chlamydomonas reinhardtii HOM05D007042 ORTHO05D008441 1.2e-06 57.8 140 25.7
MCO16G209 Micromonas commoda HOM05D007042 ORTHO05D008441 7.5e-06 55.1 147 29.3


User provided reference genes

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