Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 3.2e-206 721.5 356 100.0
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 7.2e-198 693.7 356 96.6
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 1.1e-126 457.2 358 62.8
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 1.2e-120 437.2 356 61.0
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 5.1e-119 431.8 344 62.2
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 2.2e-117 426.4 356 58.4
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 1.3e-114 417.2 356 57.9
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 7.9e-112 407.9 374 55.6
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 8.8e-111 404.4 359 54.6
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 1.7e-109 400.2 358 54.5
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 1.7e-109 400.2 357 55.2
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 6.3e-109 398.3 358 55.3
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 1.1e-108 397.5 351 55.3
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 1.4e-108 397.1 360 54.2
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 3.1e-108 396.0 357 55.2
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 4.1e-108 395.6 358 55.9
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 1.2e-107 394.0 372 52.2
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 1.5e-107 393.7 360 53.9
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 2.6e-107 392.9 360 55.6
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.0e-106 391.0 353 55.5
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 1.3e-106 390.6 366 52.7
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 1.3e-106 390.6 358 53.6
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.7e-106 390.2 355 55.5
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 2.9e-106 389.4 363 52.6
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 2.9e-106 389.4 363 54.5
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 5.0e-106 388.7 344 57.6
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 5.0e-106 388.7 358 53.6
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 5.0e-106 388.7 359 54.3
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 6.5e-106 388.3 364 54.4
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 6.5e-106 388.3 358 55.3
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 8.5e-106 387.9 360 53.6
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 2.5e-105 386.3 363 54.3
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 7.2e-105 384.8 363 53.4
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 7.2e-105 384.8 364 53.3
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 1.6e-104 383.6 362 54.1
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 1.6e-104 383.6 345 55.1
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 6.1e-104 381.7 357 54.6
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 7.9e-104 381.3 360 53.9
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 1.0e-103 380.9 355 52.7
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 2.3e-103 379.8 360 53.3
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 6.7e-103 378.3 341 56.9
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 8.8e-103 377.9 334 56.6
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 2.6e-102 376.3 359 53.5
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 1.3e-101 374.0 363 50.4
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 1.7e-101 373.6 352 54.3
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 8.2e-101 371.3 357 52.7
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 1.8e-100 370.2 367 51.5
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 3.1e-100 369.4 357 51.0
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 5.3e-100 368.6 335 54.9
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 1.6e-99 367.1 356 53.9
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 1.5e-97 360.5 358 50.8
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 3.6e-96 355.9 332 54.5
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 2.3e-95 353.2 360 49.7
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 3.0e-95 352.8 363 51.0
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 1.5e-94 350.5 360 51.4
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 7.5e-94 348.2 333 54.4
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 2.2e-93 346.7 359 49.0
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 3.7e-93 345.9 360 49.2
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 4.8e-93 345.5 302 57.6
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 7.0e-92 341.7 354 49.7
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 2.2e-90 336.7 364 51.4
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 4.7e-88 328.9 313 52.7
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 1.0e-87 327.8 361 51.2
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 1.0e-87 327.8 365 51.0
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 3.0e-87 326.2 310 54.2
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 5.2e-87 325.5 337 50.7
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 8.8e-87 324.7 328 50.6
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 2.6e-86 323.2 357 50.1
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 9.8e-86 321.2 379 46.7
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 1.7e-85 320.5 360 49.7
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 4.8e-85 318.9 360 49.7
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 6.3e-85 318.5 359 49.3
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 1.8e-84 317.0 365 49.9
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 7.0e-84 315.1 365 49.3
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 3.5e-83 312.8 345 51.0
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 7.7e-83 311.6 284 56.3
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 2.2e-82 310.1 372 49.2
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 6.5e-82 308.5 271 56.5
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 1.9e-81 307.0 343 47.2
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 7.2e-81 305.1 346 50.3
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 2.1e-80 303.5 270 57.8
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 4.0e-79 299.3 335 47.5
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 3.4e-78 296.2 282 55.0
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 5.7e-78 295.4 252 58.3
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 4.1e-76 289.3 349 44.1
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 4.5e-75 285.8 352 46.3
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 2.5e-73 280.0 276 50.4
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 1.2e-72 277.7 282 53.9
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 2.8e-72 276.6 270 51.1
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 8.9e-71 271.6 291 53.3
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 3.4e-70 269.6 342 45.0
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 1.8e-68 263.8 272 50.7
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 2.6e-62 243.4 228 53.1
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 3.6e-56 223.0 326 38.7
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 2.0e-54 217.2 276 48.6
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 3.7e-53 213.0 356 39.0
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 3.7e-53 213.0 325 41.2
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 3.9e-50 203.0 191 53.9
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 8.6e-50 201.8 356 36.8
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 7.3e-49 198.7 171 57.9
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 2.0e-46 190.7 235 46.8
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 2.6e-46 190.3 345 38.3
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 2.9e-45 186.8 340 37.4
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 6.4e-45 185.7 275 42.5
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 7.3e-41 172.2 223 46.2
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 5.8e-38 162.5 223 47.1
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 9.9e-30 135.2 159 45.9
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 3.5e-27 126.7 216 38.0
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 5.1e-26 122.9 90 58.9
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 3.6e-24 116.7 381 29.4
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 2.4e-23 114.0 82 61.0
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 8.4e-21 105.5 114 49.1
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 1.9e-20 104.4 128 43.8
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 1.9e-20 104.4 78 57.7
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 4.6e-19 99.8 234 36.8
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 6.2e-16 89.4 290 30.3
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 8.1e-16 89.0 88 47.7
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 4.0e-15 86.7 346 25.7
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 1.3e-13 81.6 76 55.3
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 3.8e-13 80.1 188 31.4
TPR.G40057 Trifolium pratense HOM05D005940 ORTHO05D007027 3.2e-12 77.0 64 50.0
CSS0026064 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 8.7e-10 68.9 47 63.8
HPP92_019693 Vanilla planifolia HOM05D005940 ORTHO05D002769 1.1e-09 68.6 58 58.6
PRCOL_00006890 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 3.7e-08 63.5 304 25.7
CSS0028355 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 1.4e-07 61.6 47 59.6


User provided reference genes

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