Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 0.0e+00 1297.7 721 100.0
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 0.0e+00 1090.9 723 87.0
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 5.8e-69 266.5 643 36.5
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 1.9e-59 235.0 663 34.4
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 4.1e-59 233.8 683 32.8
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 1.1e-54 219.2 706 34.7
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 6.9e-54 216.5 667 33.0
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 4.9e-52 210.3 659 31.6
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 4.6e-50 203.8 618 32.8
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 7.3e-48 196.4 623 31.3
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 6.2e-47 193.4 721 29.8
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 6.2e-47 193.4 615 32.8
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 2.9e-44 184.5 675 30.7
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 1.4e-43 182.2 688 29.9
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 1.4e-43 182.2 697 28.4
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 3.5e-42 177.6 681 28.6
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 5.6e-40 170.2 644 29.3
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 7.4e-40 169.9 656 29.1
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 1.1e-38 166.0 686 29.2
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 3.1e-38 164.5 686 29.9
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.2e-37 162.5 666 30.0
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 1.5e-37 162.2 653 28.8
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 1.4e-35 155.6 642 29.0
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 1.9e-35 155.2 637 29.8
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 9.3e-35 152.9 663 29.3
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 4.6e-34 150.6 666 29.0
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 4.6e-34 150.6 680 26.9
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 1.0e-33 149.4 714 28.6
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 3.0e-33 147.9 693 28.4
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 2.5e-32 144.8 555 30.6
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 2.8e-31 141.4 666 29.0
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 4.8e-31 140.6 618 28.0
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 1.4e-30 139.0 660 28.5
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.5e-29 135.6 698 26.5
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 2.6e-29 134.8 639 29.0
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 1.3e-28 132.5 647 26.6
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 4.2e-27 127.5 143 53.8
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 4.6e-26 124.0 692 27.2
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 1.3e-25 122.5 590 27.5
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 2.3e-25 121.7 665 27.2
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 8.7e-25 119.8 208 41.3
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 1.9e-24 118.6 590 26.6
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 2.5e-24 118.2 620 27.6
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 2.5e-24 118.2 635 27.6
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 7.4e-24 116.7 592 28.9
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 9.7e-24 116.3 719 26.6
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 8.2e-23 113.2 694 25.8
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 1.1e-22 112.8 623 28.1
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 1.4e-22 112.5 684 24.4
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 1.4e-22 112.5 684 25.9
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 4.1e-22 110.9 700 25.9
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 5.3e-22 110.5 685 25.1
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 9.0e-22 109.8 706 24.9
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 9.0e-22 109.8 615 26.5
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 1.2e-21 109.4 570 27.9
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 1.2e-21 109.4 719 24.8
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.2e-21 109.4 700 25.6
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 4.5e-21 107.5 638 26.6
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 4.5e-21 107.5 678 26.1
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 3.8e-20 104.4 625 26.4
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.4e-19 102.4 560 26.6
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 1.4e-19 102.4 713 24.5
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 1.4e-19 102.4 574 26.8
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.9e-19 102.1 233 36.1
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 4.2e-19 100.9 611 28.0
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.7e-18 98.2 705 24.8
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.0e-17 96.3 307 29.3
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 5.1e-17 94.0 534 27.0
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 6.7e-17 93.6 626 25.1
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 8.8e-17 93.2 611 24.9
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 1.1e-16 92.8 730 26.0
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 1.9e-16 92.0 195 36.4
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 2.8e-15 88.2 148 39.9
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 2.8e-15 88.2 486 25.1
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 4.8e-15 87.4 551 26.0
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 6.3e-15 87.0 555 27.2
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 4.1e-14 84.3 641 24.3
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 6.9e-14 83.6 179 36.3
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 9.1e-14 83.2 178 36.5
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.5e-13 82.4 691 25.0
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 2.6e-13 81.6 650 25.2
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 4.5e-13 80.9 553 26.4
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 1.0e-12 79.7 184 35.9
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.0e-12 79.7 296 29.1
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 2.2e-12 78.6 109 43.1
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 5.0e-12 77.4 191 31.4
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 1.2e-10 72.8 241 30.3
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 4.7e-10 70.9 123 45.5
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 7.9e-10 70.1 520 23.5
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 2.3e-09 68.6 179 33.5
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 3.9e-09 67.8 474 21.7
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 1.1e-08 66.2 144 37.5
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 4.4e-08 64.3 105 42.9
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 2.8e-07 61.6 108 42.6
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 3.7e-07 61.2 388 25.8


User provided reference genes

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