Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO161G0019 Papaver somniferum HOM05D007593 ORTHO05D009686 5.3e-202 707.6 390 100.0
Nn3g17072 Nelumbo nucifera HOM05D007593 ORTHO05D009686 3.3e-95 352.8 361 58.2
Aqoxy3G00839 Aquilegia oxysepala HOM05D007593 ORTHO05D009686 1.3e-91 340.9 411 52.1
Thecc.02G236500 Theobroma cacao HOM05D007593 ORTHO05D009686 2.5e-87 326.6 361 52.9
Duzib268G1169 Durio zibethinus HOM05D007593 ORTHO05D009686 3.4e-84 316.2 402 48.3
Prupe.1G263900 Prunus persica HOM05D007593 ORTHO05D009686 1.3e-83 314.3 363 54.3
Potri.008G190600 Populus trichocarpa HOM05D007593 ORTHO05D009686 1.4e-80 304.3 410 47.8
Atru.chr11.1889 Acer truncatum HOM05D007593 ORTHO05D009686 5.1e-80 302.4 399 48.4
Manes.01G193300 Manihot esculenta HOM05D007593 ORTHO05D009686 4.3e-79 299.3 400 48.2
QL03p066681 Quercus lobata HOM05D007593 ORTHO05D009686 1.4e-77 294.3 458 44.8
PGR102G2137 Punica granatum HOM05D007593 ORTHO05D009686 1.4e-74 284.3 365 48.2
TWI75G0370 Tripterygium wilfordii HOM05D007593 ORTHO05D009686 1.4e-74 284.3 302 52.6
Glyma.02G025300 Glycine max HOM05D007593 ORTHO05D009686 1.5e-71 274.2 315 50.5
MD13G1083000 Malus domestica HOM05D007593 ORTHO05D009686 1.5e-71 274.2 371 49.3
Phvul.002G079500 Phaseolus vulgaris HOM05D007593 ORTHO05D009686 1.1e-69 268.1 292 51.7
FvH4_4g35470 Fragaria vesca HOM05D007593 ORTHO05D009686 1.7e-67 260.8 363 46.0
AL1G21190 Arabidopsis lyrata HOM05D007593 ORTHO05D009686 5.0e-67 259.2 360 45.6
Glyma.01G039400 Glycine max HOM05D007593 ORTHO05D009686 4.2e-66 256.1 313 47.0
Carub.0001s0986 Capsella rubella HOM05D007593 ORTHO05D009686 2.1e-65 253.8 394 42.6
AUR62026494 Chenopodium quinoa HOM05D007593 ORTHO05D009686 1.0e-64 251.5 360 45.8
FAN07G2090 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.8e-64 250.8 373 43.7
CiPaw.06G078500 Carya illinoinensis HOM05D007593 ORTHO05D009686 6.7e-64 248.8 336 48.2
AT1G10417 Arabidopsis thaliana HOM05D007593 ORTHO05D009686 3.3e-63 246.5 307 47.9
Gohir.A05G320500 Gossypium hirsutum HOM05D007593 ORTHO05D009686 5.7e-63 245.7 303 48.8
Gorai.009G346400 Gossypium raimondii HOM05D007593 ORTHO05D009686 7.5e-63 245.4 435 40.5
FAN17G2874 Fragaria x ananassa HOM05D007593 ORTHO05D009686 9.7e-63 245.0 373 42.6
FAN12G3835 Fragaria x ananassa HOM05D007593 ORTHO05D009686 2.8e-62 243.4 231 57.6
FAN12G2740 Fragaria x ananassa HOM05D007593 ORTHO05D009686 6.3e-62 242.3 389 42.2
Cpa.g.sc5.302 Carica papaya HOM05D007593 ORTHO05D009686 1.4e-61 241.1 323 47.7
FAN22G1720 Fragaria x ananassa HOM05D007593 ORTHO05D009686 1.6e-60 237.7 378 42.1
Gohir.D05G322700 Gossypium hirsutum HOM05D007593 ORTHO05D009686 1.6e-60 237.7 393 41.5
BolC5t29606H Brassica oleracea HOM05D007593 ORTHO05D009686 4.5e-60 236.1 398 42.5
BcaC05g24886 Brassica carinata HOM05D007593 ORTHO05D009686 1.1e-58 231.5 398 41.7
AUR62026300 Chenopodium quinoa HOM05D007593 ORTHO05D009686 1.1e-58 231.5 276 50.0
A06p07060 Brassica napus HOM05D007593 ORTHO05D009686 4.2e-58 229.6 387 41.1
Thhalv10007877m.g Eutrema salsugineum HOM05D007593 ORTHO05D009686 4.7e-57 226.1 367 41.7
Sc04g0008660 Simmondsia chinensis HOM05D007593 ORTHO05D009686 8.0e-57 225.3 237 52.7
Sabra11G0071900 Salix brachista HOM05D007593 ORTHO05D009686 1.4e-56 224.6 309 46.3
Psat2g115200 Pisum sativum HOM05D007593 ORTHO05D009686 6.8e-56 222.2 284 46.8
Sabra11G0071700 Salix brachista HOM05D007593 ORTHO05D009686 6.8e-56 222.2 320 45.6
Hma1.2p1_0289F.1_g114430 Hydrangea macrophylla HOM05D007593 ORTHO05D009686 2.0e-55 220.7 361 43.5
Sabra08G0144600 Salix brachista HOM05D007593 ORTHO05D009686 7.5e-55 218.8 428 40.0
VMungo1215G1938 Vigna mungo HOM05D007593 ORTHO05D009686 2.8e-54 216.9 311 43.4
C05p08550 Brassica napus HOM05D007593 ORTHO05D009686 8.3e-54 215.3 429 38.7
EL10Ac6g13115 Beta vulgaris HOM05D007593 ORTHO05D009686 1.1e-53 214.9 350 41.4
Nitab4.5_0002542g0050 Nicotiana tabacum HOM05D007593 ORTHO05D009686 1.6e-52 211.1 402 40.5
BraA06t23921Z Brassica rapa HOM05D007593 ORTHO05D009686 1.9e-50 204.1 372 39.0
RcHm_v2.0_Chr4g0445111 Rosa chinensis HOM05D007593 ORTHO05D009686 1.9e-50 204.1 235 51.1
Actinidia01171 Actinidia chinensis HOM05D007593 ORTHO05D009686 3.0e-48 196.8 410 37.3
COL.COLO4_36239 Corchorus olitorius HOM05D007593 ORTHO05D009686 2.0e-47 194.1 332 38.3
CARHR010560 Cardamine hirsuta HOM05D007593 ORTHO05D009686 3.4e-47 193.4 370 38.4
Medtr5g037260 Medicago truncatula HOM05D007593 ORTHO05D009686 9.8e-47 191.8 311 40.2
GSVIVG01020118001 Vitis vinifera HOM05D007593 ORTHO05D009686 2.8e-46 190.3 167 62.3
arahy.Tifrunner.gnm1.ann1.M4LE0B Arachis hypogaea HOM05D007593 ORTHO05D009686 3.7e-46 189.9 313 38.3
Lsat_1_v5_gn_8_160680 Lactuca sativa HOM05D007593 ORTHO05D009686 6.3e-46 189.1 264 42.8
BcaC05g24925 Brassica carinata HOM05D007593 ORTHO05D009686 1.2e-44 184.9 337 38.9
Ciclev10032856m.g Citrus clementina HOM05D007593 ORTHO05D009686 2.0e-44 184.1 167 61.1
Lj2g0003805 Lotus japonicus HOM05D007593 ORTHO05D009686 2.0e-44 184.1 312 40.4
TAR629G1096 Trochodendron aralioides HOM05D007593 ORTHO05D009686 4.5e-44 183.0 156 65.4
ECA233G4970 Erigeron canadensis HOM05D007593 ORTHO05D009686 5.9e-44 182.6 381 35.2
Haze_12082 Corylus avellana HOM05D007593 ORTHO05D009686 1.7e-43 181.0 402 38.1
Nitab4.5_0000791g0030 Nicotiana tabacum HOM05D007593 ORTHO05D009686 1.7e-43 181.0 393 36.6
CANSAT07G0001 Cannabis sativa HOM05D007593 ORTHO05D009686 8.6e-43 178.7 429 35.9
Ca_04684_v3 Cicer arietinum L. HOM05D007593 ORTHO05D009686 6.1e-41 172.6 167 58.1
Rhsim12G0127800 Rhododendron simsii HOM05D007593 ORTHO05D009686 1.7e-38 164.5 409 34.7
HanXRQChr12g0371131 Helianthus annuus HOM05D007593 ORTHO05D009686 5.4e-37 159.5 182 49.5
Cc11_g13810 Coffea canephora HOM05D007593 ORTHO05D009686 1.1e-34 151.8 168 51.8
vmacro16309 Vaccinium macrocarpon HOM05D007593 ORTHO05D009686 5.8e-31 139.4 277 36.5
DCAR_031078 Daucus carota HOM05D007593 ORTHO05D009686 2.9e-30 137.1 188 42.6
Eucgr.B03393 Eucalyptus grandis HOM05D007593 ORTHO05D009686 4.1e-29 133.3 130 55.4
BcaC05g24887 Brassica carinata HOM05D007593 ORTHO05D009686 7.0e-29 132.5 266 35.7
CAN.G27.56 Capsicum annuum HOM05D007593 ORTHO05D009686 1.2e-28 131.7 338 32.2
Hund25291 Selenicereus undatus HOM05D007593 ORTHO05D009686 1.1e-24 118.6 109 60.6
Zm00001eb223170 Zea mays HOM05D007593 ORTHO05D009686 1.7e-22 111.3 263 30.4
Lalb_Chr05g0217441 Lupinus albus HOM05D007593 ORTHO05D009686 1.9e-21 107.8 127 48.8
CDE07G1947 Ceratophyllum demersum HOM05D007593 ORTHO05D009686 4.1e-21 106.7 138 44.2
Lalb_Chr05g0217431 Lupinus albus HOM05D007593 ORTHO05D009686 2.3e-16 90.9 111 50.5
Mapoly0067s0009 Marchantia polymorpha HOM05D007593 ORTHO05D009686 4.4e-15 86.7 268 25.0
SMO174G0259 Selaginella moellendorffii HOM05D003005 ORTHO05D021244 3.8e-14 83.6 287 23.3
AagrBONN_evm.TU.Sc2ySwM_228.4242 Anthoceros agrestis HOM05D007593 ORTHO05D009686 4.6e-12 76.6 185 30.3
MBI01_g46270_MAGBIO Magnolia biondii HOM05D007593 ORTHO05D009686 1.0e-11 75.5 148 39.2
TAR629G0814 Trochodendron aralioides HOM05D007593 ORTHO05D009686 8.6e-11 72.4 66 56.1
Sp1g09040 Schrenkiella parvula HOM05D007593 ORTHO05D009686 9.6e-10 68.9 64 62.5
RcHm_v2.0_Chr4g0445121 Rosa chinensis HOM05D007593 ORTHO05D009686 6.2e-09 66.2 141 34.8
Sabra15G0067100 Salix brachista HOM05D007593 ORTHO05D009686 6.2e-09 66.2 74 56.8
TPR.G26746 Trifolium pratense HOM05D007593 ORTHO05D009686 1.1e-08 65.5 315 25.4
arahy.Tifrunner.gnm1.ann1.YHM9KM Arachis hypogaea HOM05D007593 ORTHO05D009686 2.6e-07 60.8 59 61.0
Peaxi162Scf00209g00948 Petunia axillaris HOM05D007593 ORTHO05D009686 2.6e-07 60.8 134 36.6
Ciclev10033560m.g Citrus clementina HOM05D007593 ORTHO05D009686 3.8e-06 57.0 95 42.1
CSS0023539 Camellia sinensis var. sinensis HOM05D007593 ORTHO05D009686 8.4e-06 55.8 114 40.4


User provided reference genes

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