Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO151G0084 Papaver somniferum HOM05D004923 ORTHO05D005940 1.7e-263 912.5 610 100.0
PSO151G0007 Papaver somniferum HOM05D004923 ORTHO05D005940 2.3e-127 460.3 579 62.7
PSO151G0141 Papaver somniferum HOM05D004923 ORTHO05D005940 5.3e-124 449.1 568 62.7
PSO170G6876 Papaver somniferum HOM05D004923 ORTHO05D005940 8.0e-80 302.4 535 45.8
PSO302G0039 Papaver somniferum HOM05D004923 ORTHO05D005940 3.4e-46 190.7 417 42.0
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 3.8e-21 107.5 539 24.9
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 5.1e-18 97.1 259 34.4
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 1.1e-17 95.9 651 28.6
Nn4g26097 Nelumbo nucifera HOM05D004923 ORTHO05D005940 1.1e-17 95.9 555 26.7
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 1.5e-17 95.5 645 29.1
PSO384G5055 Papaver somniferum HOM05D004923 ORTHO05D005940 2.5e-17 94.7 395 30.6
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 3.7e-16 90.9 260 31.5
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 6.9e-15 86.7 244 33.6
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 2.0e-14 85.1 277 31.0
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 3.8e-13 80.9 675 23.3
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 5.0e-13 80.5 632 25.3
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 8.5e-13 79.7 211 30.8
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 1.1e-12 79.3 321 27.7
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 3.2e-12 77.8 248 31.9
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 3.2e-12 77.8 506 25.3
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 5.5e-12 77.0 268 29.5
Sopen01g053000 Solanum pennellii HOM05D004923 ORTHO05D005940 1.2e-11 75.9 670 22.8
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 1.6e-11 75.5 271 30.3
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 1.6e-11 75.5 207 32.4
MSTRG.12109 Avicennia marina HOM05D004923 ORTHO05D005940 6.1e-11 73.6 652 21.5
Prupe.6G332700 Prunus persica HOM05D004923 ORTHO05D005940 7.9e-11 73.2 192 33.3
CDE09G0746 Ceratophyllum demersum HOM05D056443 ORTHO05D005940 1.8e-10 72.0 689 23.1
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 1.8e-10 72.0 649 22.5
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 2.3e-10 71.6 667 24.6
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 2.3e-10 71.6 584 26.4
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 2.3e-10 71.6 347 25.9
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 3.0e-10 71.2 281 28.1
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 3.9e-10 70.9 645 25.1
Thhalv10003823m.g Eutrema salsugineum HOM05D004923 ORTHO05D005940 6.7e-10 70.1 247 30.8
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 6.7e-10 70.1 645 23.7
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 6.7e-10 70.1 230 31.3
Sp2g20550 Schrenkiella parvula HOM05D004923 ORTHO05D005940 8.8e-10 69.7 322 30.1
A05p42440 Brassica napus HOM05D004923 ORTHO05D005940 1.5e-09 68.9 220 32.3
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 1.5e-09 68.9 669 23.2
Carub.0003s0437 Capsella rubella HOM05D004923 ORTHO05D005940 6.3e-08 63.5 228 31.6
FAN05G5260 Fragaria x ananassa HOM05D004923 ORTHO05D005940 8.2e-08 63.2 159 32.1
FAN02G0211 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.1e-07 62.8 153 33.3
FAN05G2617 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.1e-07 62.8 153 33.3
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 1.4e-07 62.4 210 28.6
BcaNung04359 Brassica carinata HOM05D004923 ORTHO05D005940 2.4e-07 61.6 336 28.0
ClCG02G016160 Citrullus lanatus HOM05D004923 ORTHO05D005940 2.4e-07 61.6 632 22.0
Medtr1g082215 Medicago truncatula HOM05D004923 ORTHO05D005940 3.1e-07 61.2 168 33.9
FvH4_6g04961 Fragaria vesca HOM05D004923 ORTHO05D005940 4.1e-07 60.8 153 32.7
FAN09G1938 Fragaria x ananassa HOM05D004923 ORTHO05D005940 4.1e-07 60.8 153 32.7
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 5.3e-07 60.5 210 29.0
FAN14G0846 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.2e-06 59.3 153 32.0
Glyma.20G230700 Glycine max HOM05D004923 ORTHO05D005940 2.0e-06 58.5 223 30.5
RcHm_v2.0_Chr3g0453461 Rosa chinensis HOM05D004923 ORTHO05D005940 2.0e-06 58.5 169 31.4
Lalb_Chr02g0148481 Lupinus albus HOM05D004923 ORTHO05D005940 2.6e-06 58.2 359 27.6
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 3.4e-06 57.8 265 28.7
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 3.4e-06 57.8 246 25.6
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 3.4e-06 57.8 233 26.2
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 3.4e-06 57.8 252 29.4


User provided reference genes

Program Settings