Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO151G0007 Papaver somniferum HOM05D004923 ORTHO05D005940 1.6e-231 806.2 579 100.0
PSO151G0141 Papaver somniferum HOM05D004923 ORTHO05D005940 1.6e-223 779.6 565 99.8
PSO151G0084 Papaver somniferum HOM05D004923 ORTHO05D005940 5.2e-129 465.7 579 62.7
PSO170G6876 Papaver somniferum HOM05D004923 ORTHO05D005940 1.1e-83 315.1 427 53.6
PSO302G0039 Papaver somniferum HOM05D004923 ORTHO05D005940 3.6e-61 240.4 415 47.5
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 2.5e-22 111.3 358 29.1
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 2.5e-22 111.3 429 27.7
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 5.6e-22 110.2 286 29.0
Sopen01g053000 Solanum pennellii HOM05D004923 ORTHO05D005940 2.8e-21 107.8 422 28.7
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 8.0e-21 106.3 274 28.8
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 1.0e-20 105.9 419 25.8
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 1.8e-20 105.1 422 28.4
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 3.0e-20 104.4 261 30.7
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 3.0e-20 104.4 256 30.5
Dinv40234 Davidia involucrata HOM05D004923 ORTHO05D005940 6.8e-20 103.2 353 27.8
Nn4g26097 Nelumbo nucifera HOM05D004923 ORTHO05D005940 2.6e-19 101.3 272 29.8
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 4.4e-19 100.5 277 32.9
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 1.7e-18 98.6 263 32.7
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 2.2e-18 98.2 229 31.9
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 2.9e-18 97.8 253 30.4
Lj9P678T27 Lonicera japonica HOM05D004923 ORTHO05D005940 3.7e-18 97.4 371 27.8
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 4.9e-18 97.1 282 29.1
Thhalv10003823m.g Eutrema salsugineum HOM05D004923 ORTHO05D005940 8.3e-18 96.3 225 33.3
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 5.4e-17 93.6 204 32.4
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 7.0e-17 93.2 209 30.6
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 7.0e-17 93.2 396 25.8
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 5.9e-16 90.1 227 32.6
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 5.9e-16 90.1 283 27.2
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 1.7e-15 88.6 222 34.2
MBI18_g16961_MAGBIO Magnolia biondii HOM05D004923 ORTHO05D005940 3.0e-15 87.8 226 31.4
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 3.9e-15 87.4 267 28.5
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 5.0e-15 87.0 308 27.3
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 1.9e-14 85.1 380 25.8
PSO384G5055 Papaver somniferum HOM05D004923 ORTHO05D005940 2.5e-14 84.7 388 30.7
Sc06g0003440 Simmondsia chinensis HOM05D004923 ORTHO05D005940 4.3e-14 84.0 363 26.2
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 7.3e-14 83.2 263 28.5
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 9.5e-14 82.8 208 30.8
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 1.6e-13 82.0 208 29.3
Rhsim05G0146200 Rhododendron simsii HOM05D004923 ORTHO05D005940 1.6e-13 82.0 230 32.6
Sp2g20550 Schrenkiella parvula HOM05D004923 ORTHO05D005940 1.6e-13 82.0 225 32.0
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 2.1e-13 81.6 277 28.2
Gohir.D08G229800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 2.1e-13 81.6 203 31.5
Gorai.004G244000 Gossypium raimondii HOM05D004923 ORTHO05D005940 2.1e-13 81.6 203 31.5
ClCG02G016160 Citrullus lanatus HOM05D004923 ORTHO05D005940 8.0e-13 79.7 375 25.3
Prupe.6G332700 Prunus persica HOM05D004923 ORTHO05D005940 8.0e-13 79.7 193 31.6
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 1.8e-12 78.6 227 31.3
AUR62000899 Chenopodium quinoa HOM05D004923 ORTHO05D005940 4.0e-12 77.4 384 26.3
Phvul.007G183300 Phaseolus vulgaris HOM05D004923 ORTHO05D005940 6.8e-12 76.6 231 31.2
Sed0008414 Sechium edule HOM05D004923 ORTHO05D005940 6.8e-12 76.6 419 27.0
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 8.9e-12 76.3 589 27.5
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 8.9e-12 76.3 217 29.0
Oeu019603.1 Olea europaea HOM05D004923 ORTHO05D005940 8.9e-12 76.3 229 29.7
AT5G27330 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 1.2e-11 75.9 265 27.5
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 1.2e-11 75.9 217 29.0
AL6G39740 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 1.5e-11 75.5 225 31.1
A05p42440 Brassica napus HOM05D004923 ORTHO05D005940 1.5e-11 75.5 222 31.5
Actinidia19810 Actinidia chinensis HOM05D004923 ORTHO05D005940 2.6e-11 74.7 427 26.9
MELO3C004316.2 Cucumis melo HOM05D004923 ORTHO05D005940 2.6e-11 74.7 281 27.4
Carub.0003s0437 Capsella rubella HOM05D004923 ORTHO05D005940 4.4e-11 73.9 226 29.6
Gohir.D11G270900 Gossypium hirsutum HOM05D004923 ORTHO05D005940 7.5e-11 73.2 217 28.6
Glyma.20G230700 Glycine max HOM05D004923 ORTHO05D005940 9.8e-11 72.8 221 29.4
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 1.3e-10 72.4 394 24.4
BcaNung04359 Brassica carinata HOM05D004923 ORTHO05D005940 2.2e-10 71.6 358 26.5
FAN09G1938 Fragaria x ananassa HOM05D004923 ORTHO05D005940 2.9e-10 71.2 151 29.8
FAN05G2617 Fragaria x ananassa HOM05D004923 ORTHO05D005940 3.7e-10 70.9 151 30.5
arahy.Tifrunner.gnm1.ann1.VPW6I2 Arachis hypogaea HOM05D004923 ORTHO05D005940 4.9e-10 70.5 270 27.4
FAN02G0211 Fragaria x ananassa HOM05D004923 ORTHO05D005940 4.9e-10 70.5 151 29.8
Nn4g26098 Nelumbo nucifera HOM05D004923 ORTHO05D005940 6.4e-10 70.1 272 26.5
Aqoxy2G03170 Aquilegia oxysepala HOM05D004923 ORTHO05D005940 8.3e-10 69.7 423 24.6
Eucgr.B02029 Eucalyptus grandis HOM05D004923 ORTHO05D005940 8.3e-10 69.7 266 25.9
FvH4_6g04961 Fragaria vesca HOM05D004923 ORTHO05D005940 8.3e-10 69.7 151 31.1
CDE09G0746 Ceratophyllum demersum HOM05D056443 ORTHO05D005940 1.1e-09 69.3 379 27.7
FAN05G5260 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.1e-09 69.3 166 29.5
HanXRQChr15g0493471 Helianthus annuus HOM05D004923 ORTHO05D005940 1.4e-09 68.9 279 27.2
Lj5g0013750 Lotus japonicus HOM05D004923 ORTHO05D005940 1.4e-09 68.9 194 29.9
FAN14G0846 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.9e-09 68.6 151 31.1
GSVIVG01022015001 Vitis vinifera HOM05D004923 ORTHO05D005940 1.9e-09 68.6 260 26.5
Potri.005G040500 Populus trichocarpa HOM05D004923 ORTHO05D005940 1.2e-08 65.9 275 25.5
Oeu020434.1 Olea europaea HOM05D004923 ORTHO05D005940 1.6e-08 65.5 371 27.2
ECA246G1289 Erigeron canadensis HOM05D004923 ORTHO05D005940 3.5e-08 64.3 267 26.6
RcHm_v2.0_Chr3g0453461 Rosa chinensis HOM05D004923 ORTHO05D005940 3.5e-08 64.3 178 27.5
CARHR079450 Cardamine hirsuta HOM05D004923 ORTHO05D005940 4.6e-08 63.9 226 27.0
Cc02_g32730 Coffea canephora HOM05D004923 ORTHO05D005940 6.0e-08 63.5 260 26.2
Manes.08G124600 Manihot esculenta HOM05D004923 ORTHO05D005940 6.0e-08 63.5 220 28.2
Migut.A01112 Erythranthe guttata HOM05D004923 ORTHO05D005940 1.0e-07 62.8 116 39.7
Medtr1g082215 Medicago truncatula HOM05D004923 ORTHO05D005940 1.3e-07 62.4 177 31.1
C05p62100 Brassica napus HOM05D004923 ORTHO05D005940 1.7e-07 62.0 421 25.4
BolC5t34868H Brassica oleracea HOM05D004923 ORTHO05D005940 1.7e-07 62.0 421 25.4
CAN.G1329.24 Capsicum annuum HOM05D004923 ORTHO05D005940 3.0e-07 61.2 81 45.7
MSTRG.12109 Avicennia marina HOM05D004923 ORTHO05D005940 5.0e-07 60.5 572 21.5
Ca_10079_v3 Cicer arietinum L. HOM05D004923 ORTHO05D005940 5.0e-07 60.5 180 27.8
Lalb_Chr02g0148481 Lupinus albus HOM05D004923 ORTHO05D005940 6.6e-07 60.1 377 23.3
AL3G15510 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 8.6e-07 59.7 240 27.9
BraA06t26683Z Brassica rapa HOM05D004923 ORTHO05D005940 8.6e-07 59.7 138 34.1
C07p40590 Brassica napus HOM05D004923 ORTHO05D005940 1.1e-06 59.3 392 26.0
ECA233G0604 Erigeron canadensis HOM05D004923 ORTHO05D005940 1.9e-06 58.5 216 25.9
TPR.G2744 Trifolium pratense HOM05D004923 ORTHO05D005940 2.5e-06 58.2 151 33.8
Sp3g03950 Schrenkiella parvula HOM05D004923 ORTHO05D005940 3.3e-06 57.8 226 26.5
BolC7t44596H Brassica oleracea HOM05D004923 ORTHO05D005940 7.3e-06 56.6 132 32.6
AUR62005075 Chenopodium quinoa HOM05D004923 ORTHO05D005940 9.5e-06 56.2 359 23.1
Nitab4.5_0000003g0420 Nicotiana tabacum HOM05D004923 ORTHO05D005940 9.5e-06 56.2 116 34.5
VMungo0720G2495 Vigna mungo HOM05D004923 ORTHO05D005940 9.5e-06 56.2 349 24.9


User provided reference genes

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