Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO144G0132 Papaver somniferum HOM05D005008 ORTHO05D006092 2.0e-74 282.3 140 100.0
PSO325G0018 Papaver somniferum HOM05D005008 ORTHO05D006092 4.1e-72 274.6 139 97.1
PSO478G0762 Papaver somniferum HOM05D005008 ORTHO05D006092 2.1e-52 209.1 117 87.2
PSO017G3706 Papaver somniferum HOM05D005008 ORTHO05D006092 5.2e-51 204.5 117 85.5
PSO017G4122 Papaver somniferum HOM05D005008 ORTHO05D006092 2.0e-50 202.6 117 84.6
PSO339G0217 Papaver somniferum HOM05D005008 ORTHO05D006092 1.1e-45 186.8 107 84.1
PSO541G3575 Papaver somniferum HOM05D005008 ORTHO05D006092 1.2e-42 176.8 104 82.7
Aqoxy7G02777 Aquilegia oxysepala HOM05D005008 ORTHO05D006092 1.6e-39 166.4 134 60.4
DCAR_021985 Daucus carota HOM05D005008 ORTHO05D006092 1.7e-38 162.9 136 55.1
Atru.chr3.3067 Acer truncatum HOM05D005008 ORTHO05D006092 1.1e-35 153.7 130 56.2
Nitab4.5_0003644g0030 Nicotiana tabacum HOM05D005008 ORTHO05D006092 1.1e-35 153.7 130 55.4
Nitab4.5_0015902g0010 Nicotiana tabacum HOM05D005008 ORTHO05D006092 1.1e-35 153.7 129 56.6
PGSC0003DMG400005906 Solanum tuberosum HOM05D005008 ORTHO05D006092 1.8e-35 152.9 129 55.8
Solyc06g073900.3 Solanum lycopersicum HOM05D005008 ORTHO05D006092 2.4e-35 152.5 130 54.6
Sopen06g030300 Solanum pennellii HOM05D005008 ORTHO05D006092 2.4e-35 152.5 130 54.6
CAN.G1463.18 Capsicum annuum HOM05D005008 ORTHO05D006092 5.3e-35 151.4 129 55.0
Hma1.2p1_0101F.1_g049710 Hydrangea macrophylla HOM05D005008 ORTHO05D006092 5.3e-35 151.4 130 54.6
CSS0002518 Camellia sinensis var. sinensis HOM05D005008 ORTHO05D006092 2.6e-34 149.1 129 55.0
Rhsim13G0198500 Rhododendron simsii HOM05D005008 ORTHO05D006092 3.4e-34 148.7 130 54.6
Sopen11g029460 Solanum pennellii HOM05D005008 ORTHO05D006092 3.4e-34 148.7 129 55.0
unitig_746.g26601 Utricularia gibba HOM05D005008 ORTHO05D006092 3.4e-34 148.7 134 54.5
Migut.D02371 Erythranthe guttata HOM05D005008 ORTHO05D006092 9.9e-34 147.1 133 54.9
Migut.D02374 Erythranthe guttata HOM05D005008 ORTHO05D006092 9.9e-34 147.1 133 54.9
Solyc11g071790.2 Solanum lycopersicum HOM05D005008 ORTHO05D006092 9.9e-34 147.1 129 55.0
PGSC0003DMG400002990 Solanum tuberosum HOM05D005008 ORTHO05D006092 9.9e-34 147.1 129 54.3
Nitab4.5_0002426g0070 Nicotiana tabacum HOM05D005008 ORTHO05D006092 1.7e-33 146.4 129 54.3
Peaxi162Scf00717g00217 Petunia axillaris HOM05D005008 ORTHO05D006092 1.7e-33 146.4 129 54.3
Peaxi162Scf00098g00148 Petunia axillaris HOM05D005008 ORTHO05D006092 2.2e-33 146.0 129 52.7
Psat7g129160 Pisum sativum HOM05D005008 ORTHO05D006092 2.2e-33 146.0 132 55.3
unitig_899.g15386 Utricularia gibba HOM05D005008 ORTHO05D006092 2.2e-33 146.0 132 53.8
RcHm_v2.0_Chr7g0230441 Rosa chinensis HOM05D005008 ORTHO05D006092 8.4e-33 144.1 130 55.4
FAN08G1342 Fragaria x ananassa HOM05D005008 ORTHO05D006092 1.1e-32 143.7 126 57.1
FAN18G0191 Fragaria x ananassa HOM05D005008 ORTHO05D006092 1.1e-32 143.7 126 57.1
Nitab4.5_0005569g0020 Nicotiana tabacum HOM05D005008 ORTHO05D006092 1.1e-32 143.7 129 52.7
RcHm_v2.0_Chr5g0049161 Rosa chinensis HOM05D005008 ORTHO05D006092 1.1e-32 143.7 130 54.6
Dinv21730 Davidia involucrata HOM05D005008 ORTHO05D006092 2.4e-32 142.5 130 53.1
SGA_v2.0_scaffold114G31950 Striga asiatica HOM05D005008 ORTHO05D006092 2.4e-32 142.5 132 53.0
THA.LOC104808952 Tarenaya hassleriana HOM05D005008 ORTHO05D006092 3.2e-32 142.1 130 53.1
ATR1136G073 Amborella trichopoda HOM05D005008 ORTHO05D006092 4.2e-32 141.7 130 50.0
Duzib170G0524 Durio zibethinus HOM05D005008 ORTHO05D006092 4.2e-32 141.7 130 53.1
FAN04G2231 Fragaria x ananassa HOM05D005008 ORTHO05D006092 4.2e-32 141.7 126 56.3
TAR628G1298 Trochodendron aralioides HOM05D005008 ORTHO05D006092 4.2e-32 141.7 130 50.8
Ciclev10029485m.g Citrus clementina HOM05D005008 ORTHO05D006092 5.4e-32 141.4 129 52.7
FAN13G1722 Fragaria x ananassa HOM05D005008 ORTHO05D006092 5.4e-32 141.4 126 56.3
PGR083G2197 Punica granatum HOM05D005008 ORTHO05D006092 5.4e-32 141.4 130 53.1
Hund18808 Selenicereus undatus HOM05D005008 ORTHO05D006092 5.4e-32 141.4 143 49.0
Dinv18863 Davidia involucrata HOM05D005008 ORTHO05D006092 7.1e-32 141.0 130 52.3
Lsat_1_v5_gn_6_104840 Lactuca sativa HOM05D005008 ORTHO05D006092 7.1e-32 141.0 141 51.1
Cc01_g07910 Coffea canephora HOM05D005008 ORTHO05D006092 1.2e-31 140.2 141 51.1
Manes.11G103800 Manihot esculenta HOM05D005008 ORTHO05D006092 1.2e-31 140.2 129 53.5
AUR62001577 Chenopodium quinoa HOM05D005008 ORTHO05D006092 1.6e-31 139.8 137 49.6
Eucgr.J00592 Eucalyptus grandis HOM05D005008 ORTHO05D006092 1.6e-31 139.8 130 52.3
Lj2g0024950 Lotus japonicus HOM05D005008 ORTHO05D006092 2.1e-31 139.4 136 48.5
TPR.G38259 Trifolium pratense HOM05D005008 ORTHO05D006092 2.1e-31 139.4 136 50.7
MSTRG.21002 Avicennia marina HOM05D005008 ORTHO05D006092 2.7e-31 139.0 131 53.4
MSTRG.18800 Avicennia marina HOM05D005008 ORTHO05D006092 3.5e-31 138.7 131 51.9
Thecc.09G268300 Theobroma cacao HOM05D005008 ORTHO05D006092 4.6e-31 138.3 130 50.0
vmacro04058 Vaccinium macrocarpon HOM05D005008 ORTHO05D006092 4.6e-31 138.3 130 52.3
Ca_18750_v3 Cicer arietinum L. HOM05D005008 ORTHO05D006092 7.9e-31 137.5 132 52.3
CsaV3_1G043620 Cucumis sativus L. HOM05D005008 ORTHO05D006092 7.9e-31 137.5 130 50.8
MBI17_g21974_MAGBIO Magnolia biondii HOM05D005008 ORTHO05D006092 7.9e-31 137.5 127 50.4
MELO3C015091.2 Cucumis melo HOM05D005008 ORTHO05D006092 1.0e-30 137.1 130 51.5
Lj2E351T1 Lonicera japonica HOM05D005008 ORTHO05D006092 1.0e-30 137.1 120 53.3
Lalb_Chr16g0385131 Lupinus albus HOM05D005008 ORTHO05D006092 1.0e-30 137.1 132 50.0
Glyma.20G018300 Glycine max HOM05D005008 ORTHO05D006092 1.3e-30 136.7 137 48.9
Sc21g0006720 Simmondsia chinensis HOM05D005008 ORTHO05D006092 1.3e-30 136.7 130 51.5
GSVIVG01028464001 Vitis vinifera HOM05D005008 ORTHO05D006092 1.3e-30 136.7 129 49.6
VMungo0251G1441 Vigna mungo HOM05D005008 ORTHO05D006092 1.8e-30 136.3 132 51.5
CDE05G0523 Ceratophyllum demersum HOM05D005008 ORTHO05D006092 2.3e-30 136.0 129 50.4
CDE04G3167 Ceratophyllum demersum HOM05D005008 ORTHO05D006092 3.0e-30 135.6 129 50.4
MD03G1160100 Malus domestica HOM05D005008 ORTHO05D006092 3.9e-30 135.2 130 50.0
MBI17_g21976_MAGBIO Magnolia biondii HOM05D000527 ORTHO05D000559 5.1e-30 134.8 123 52.0
Thhalv10019305m.g Eutrema salsugineum HOM05D005008 ORTHO05D006092 6.7e-30 134.4 133 48.9
Gohir.A08G007400 Gossypium hirsutum HOM05D005008 ORTHO05D006092 6.7e-30 134.4 129 49.6
Cfa010212 Carpinus fangiana HOM05D005008 ORTHO05D006092 1.5e-29 133.3 130 50.8
Duzib168G2291 Durio zibethinus HOM05D005008 ORTHO05D006092 1.5e-29 133.3 130 49.2
Gohir.D08G017500 Gossypium hirsutum HOM05D005008 ORTHO05D006092 1.5e-29 133.3 129 49.6
Gorai.004G011900 Gossypium raimondii HOM05D005008 ORTHO05D006092 1.5e-29 133.3 129 49.6
Sp1g07130 Schrenkiella parvula HOM05D005008 ORTHO05D006092 1.5e-29 133.3 133 48.9
ClCG03G012390 Citrullus lanatus HOM05D005008 ORTHO05D006092 1.9e-29 132.9 130 50.0
Sed0018780 Sechium edule HOM05D005008 ORTHO05D006092 1.9e-29 132.9 130 49.2
Lalb_Chr05g0219631 Lupinus albus HOM05D005008 ORTHO05D006092 2.5e-29 132.5 126 50.8
Sabra09G0000700 Salix brachista HOM05D005008 ORTHO05D006092 2.5e-29 132.5 129 48.1
Aa31LG5G14080 Aethionema arabicum HOM05D005008 ORTHO05D006092 4.3e-29 131.7 135 47.4
EL10Ac7g16268 Beta vulgaris HOM05D005008 ORTHO05D006092 4.3e-29 131.7 126 50.8
CiPaw.13G126400 Carya illinoinensis HOM05D005008 ORTHO05D006092 5.6e-29 131.3 129 49.6
arahy.Tifrunner.gnm1.ann1.LRUS99 Arachis hypogaea HOM05D005008 ORTHO05D006092 7.4e-29 131.0 132 49.2
Prupe.6G148300 Prunus persica HOM05D005008 ORTHO05D006092 7.4e-29 131.0 130 48.5
TPR.G27448 Trifolium pratense HOM05D005008 ORTHO05D006092 7.4e-29 131.0 132 49.2
Medtr4g084320 Medicago truncatula HOM05D005008 ORTHO05D006092 1.3e-28 130.2 132 50.0
CARHR008370 Cardamine hirsuta HOM05D005008 ORTHO05D006092 1.6e-28 129.8 133 47.4
COL.COLO4_25364 Corchorus olitorius HOM05D005008 ORTHO05D006092 1.6e-28 129.8 131 50.4
HanXRQChr05g0163331 Helianthus annuus HOM05D005008 ORTHO05D006092 1.6e-28 129.8 142 47.9
MD11G1175100 Malus domestica HOM05D005008 ORTHO05D006092 1.6e-28 129.8 130 48.5
Phvul.002G096700 Phaseolus vulgaris HOM05D005008 ORTHO05D006092 1.6e-28 129.8 132 49.2
THA.LOC104815294 Tarenaya hassleriana HOM05D005008 ORTHO05D006092 1.6e-28 129.8 130 49.2
Sc12g0000410 Simmondsia chinensis HOM05D005008 ORTHO05D006092 2.1e-28 129.4 137 49.6
Oeu031444.1 Olea europaea HOM05D005008 ORTHO05D006092 3.6e-28 128.6 131 47.3
AT1G08480 Arabidopsis thaliana HOM05D005008 ORTHO05D006092 8.1e-28 127.5 133 46.6
Carub.0001s0784 Capsella rubella HOM05D005008 ORTHO05D006092 8.1e-28 127.5 133 46.6
ECA246G4934 Erigeron canadensis HOM05D005008 ORTHO05D006092 1.1e-27 127.1 134 48.5
arahy.Tifrunner.gnm1.ann1.0IE2SQ Arachis hypogaea HOM05D005008 ORTHO05D006092 1.4e-27 126.7 132 48.5
Aa31LG2G20300 Aethionema arabicum HOM05D005008 ORTHO05D006092 1.8e-27 126.3 125 49.6
Potri.009G001100 Populus trichocarpa HOM05D005008 ORTHO05D006092 1.8e-27 126.3 129 46.5
A06p05480 Brassica napus HOM05D005008 ORTHO05D006092 2.4e-27 125.9 137 47.4
BraA06t23756Z Brassica rapa HOM05D005008 ORTHO05D006092 2.4e-27 125.9 137 47.4
BcaB03g13330 Brassica carinata HOM05D005008 ORTHO05D006092 4.0e-27 125.2 126 49.2
A08p35120 Brassica napus HOM05D005008 ORTHO05D006092 4.0e-27 125.2 126 50.0
BcaB07g34092 Brassica carinata HOM05D005008 ORTHO05D006092 6.9e-27 124.4 126 49.2
C05p06590 Brassica napus HOM05D005008 ORTHO05D006092 6.9e-27 124.4 126 49.2
BolC5t29419H Brassica oleracea HOM05D005008 ORTHO05D006092 6.9e-27 124.4 126 49.2
BcaC07g38394 Brassica carinata HOM05D005008 ORTHO05D006092 1.2e-26 123.6 126 49.2
C08p11520 Brassica napus HOM05D005008 ORTHO05D006092 1.2e-26 123.6 126 49.2
BolC8t48832H Brassica oleracea HOM05D005008 ORTHO05D006092 1.2e-26 123.6 126 49.2
BraA08t35421Z Brassica rapa HOM05D005008 ORTHO05D006092 1.2e-26 123.6 126 49.2
Zm00001eb173990 Zea mays HOM05D005008 ORTHO05D006092 3.4e-26 122.1 134 44.0
TWI31G0222 Tripterygium wilfordii HOM05D005008 ORTHO05D006092 7.6e-26 120.9 125 48.0
Zm00001eb260600 Zea mays HOM05D005008 ORTHO05D006092 7.6e-26 120.9 134 44.0
arahy.Tifrunner.gnm1.ann1.L1LZAQ Arachis hypogaea HOM05D005008 ORTHO05D006092 2.9e-25 119.0 123 48.0
AL1G18910 Arabidopsis lyrata HOM05D005008 ORTHO05D006092 8.4e-25 117.5 150 42.0
Os08g0112800 Oryza sativa ssp. japonica HOM05D005008 ORTHO05D006092 1.4e-24 116.7 120 46.7
SEGI_09212 Sequoiadendron giganteum HOM05D005008 ORTHO05D006092 1.6e-23 113.2 132 40.9
PSO447G0120 Papaver somniferum HOM05D005008 ORTHO05D006092 4.6e-23 111.7 73 72.6
arahy.Tifrunner.gnm1.ann1.67HGNM Arachis hypogaea HOM05D005008 ORTHO05D006092 2.3e-22 109.4 114 48.2
HPP92_002034 Vanilla planifolia HOM05D005008 ORTHO05D006092 1.9e-21 106.3 126 40.5
QL02p021765 Quercus lobata HOM05D005008 ORTHO05D006092 1.1e-19 100.5 196 33.7
Atru.chr5.2770 Acer truncatum HOM05D005008 ORTHO05D006092 5.3e-19 98.2 84 57.1
SalBow6G2115 Salvia bowleyana HOM05D005008 ORTHO05D006092 1.5e-18 96.7 83 54.2
Nn1g08680 Nelumbo nucifera HOM05D005008 ORTHO05D006092 2.6e-18 95.9 81 55.6
Ah.01g003330 Amaranthus hybridus HOM05D005008 ORTHO05D006092 2.2e-17 92.8 209 30.1
Mapoly0024s0049 Marchantia polymorpha HOM05D005008 ORTHO05D006092 4.9e-17 91.7 132 37.9
AUR62020205 Chenopodium quinoa HOM05D005008 ORTHO05D006092 4.2e-16 88.6 90 46.7
FvH4_5g32770 Fragaria vesca HOM05D005008 ORTHO05D006092 1.6e-15 86.7 81 54.3
Pp3c7_24330 Physcomitrium patens HOM05D005008 ORTHO05D006092 2.3e-14 82.8 139 34.5
Pp3c1_6020 Physcomitrium patens HOM05D005008 ORTHO05D006092 5.1e-14 81.6 139 33.8
Haze_23598 Corylus avellana HOM05D005008 ORTHO05D006092 5.7e-13 78.2 82 43.9
Sed0017043 Sechium edule HOM05D005008 ORTHO05D006092 4.1e-11 72.0 86 43.0
CBR_g29511 Chara braunii HOM05D005008 ORTHO05D006092 6.9e-11 71.2 131 32.1
CBR_g36250 Chara braunii HOM05D005008 ORTHO05D006092 2.9e-09 65.9 138 29.0
BcaB07g32561 Brassica carinata HOM05D005008 ORTHO05D006092 2.1e-07 59.7 84 47.6
TPR.G18466 Trifolium pratense HOM05D005008 ORTHO05D006092 3.6e-07 58.9 51 52.9
SMO364G0346 Selaginella moellendorffii HOM05D005008 ORTHO05D006092 1.8e-06 56.6 95 33.7


User provided reference genes

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