Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 1.4e-100 369.8 211 100.0
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 3.2e-92 342.0 213 85.0
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 2.5e-28 129.8 190 46.3
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 1.4e-26 124.0 221 43.0
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 5.1e-26 122.1 191 40.8
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 4.4e-25 119.0 178 46.6
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 5.7e-25 118.6 205 40.5
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 2.2e-24 116.7 231 41.6
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 6.3e-24 115.2 206 39.8
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.1e-23 114.4 198 39.9
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 1.1e-23 114.4 185 37.3
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 1.1e-23 114.4 168 57.7
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 1.8e-23 113.6 207 38.2
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 1.8e-23 113.6 200 46.0
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 1.8e-23 113.6 167 44.9
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 3.1e-23 112.8 170 37.6
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 5.3e-23 112.1 166 45.2
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 7.0e-23 111.7 197 48.7
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 1.2e-22 110.9 198 37.9
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.5e-22 110.5 162 38.9
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 1.5e-22 110.5 203 38.4
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 2.0e-22 110.2 158 46.2
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 2.6e-22 109.8 172 42.4
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 2.6e-22 109.8 183 42.6
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 3.5e-22 109.4 174 37.9
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 3.5e-22 109.4 189 38.6
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 5.9e-22 108.6 178 41.6
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 7.7e-22 108.2 165 40.6
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 7.7e-22 108.2 180 37.2
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 7.7e-22 108.2 164 38.4
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 1.0e-21 107.8 174 37.4
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 1.0e-21 107.8 165 43.0
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.0e-21 107.8 183 42.1
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 1.0e-21 107.8 183 42.1
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 1.3e-21 107.5 175 37.1
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.3e-21 107.5 172 47.1
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 1.7e-21 107.1 161 40.4
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 2.2e-21 106.7 149 45.0
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 3.8e-21 105.9 169 41.4
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 3.8e-21 105.9 177 40.1
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 5.0e-21 105.5 161 38.5
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 5.0e-21 105.5 180 38.9
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 8.5e-21 104.8 165 41.2
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 1.9e-20 103.6 166 39.2
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 1.9e-20 103.6 166 42.8
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 2.5e-20 103.2 178 39.3
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 2.5e-20 103.2 159 40.3
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 3.2e-20 102.8 175 37.7
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 4.2e-20 102.4 172 38.4
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 4.2e-20 102.4 194 37.6
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 7.2e-20 101.7 187 40.6
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 9.4e-20 101.3 160 40.0
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 9.4e-20 101.3 198 38.9
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 9.4e-20 101.3 188 47.9
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 1.2e-19 100.9 163 53.4
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 1.2e-19 100.9 186 47.3
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 2.1e-19 100.1 178 37.6
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 2.1e-19 100.1 179 33.0
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 3.6e-19 99.4 192 36.5
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 3.6e-19 99.4 194 39.7
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 4.7e-19 99.0 168 53.6
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 4.7e-19 99.0 193 36.3
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 4.7e-19 99.0 175 34.9
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 4.7e-19 99.0 176 45.5
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 6.1e-19 98.6 179 48.0
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 6.1e-19 98.6 154 51.9
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 8.0e-19 98.2 170 42.4
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 8.0e-19 98.2 175 39.4
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 1.4e-18 97.4 187 36.4
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 1.8e-18 97.1 173 48.6
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.8e-18 97.1 172 41.9
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 1.8e-18 97.1 175 37.7
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 4.0e-18 95.9 171 37.4
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 4.0e-18 95.9 168 47.0
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 5.2e-18 95.5 146 36.3
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 6.7e-18 95.1 160 40.0
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 6.7e-18 95.1 202 33.2
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 6.7e-18 95.1 189 36.0
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 8.8e-18 94.7 164 40.9
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 8.8e-18 94.7 164 40.9
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 8.8e-18 94.7 164 38.4
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 1.1e-17 94.4 180 36.1
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 1.1e-17 94.4 153 40.5
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 1.1e-17 94.4 153 40.5
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 1.1e-17 94.4 194 37.1
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 1.5e-17 94.0 173 37.6
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 1.5e-17 94.0 149 38.3
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 1.5e-17 94.0 182 36.8
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 2.6e-17 93.2 151 39.1
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 2.6e-17 93.2 199 33.2
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 3.3e-17 92.8 217 41.5
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 4.4e-17 92.4 161 44.7
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 5.7e-17 92.0 145 37.2
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 1.7e-16 90.5 199 33.2
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 1.7e-16 90.5 153 51.0
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 1.7e-16 90.5 166 43.4
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 2.8e-16 89.7 169 34.3
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 3.7e-16 89.4 150 52.7
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 8.2e-16 88.2 167 38.3
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 8.2e-16 88.2 185 35.1
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 1.4e-15 87.4 188 45.2
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 3.1e-15 86.3 161 39.1
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 3.1e-15 86.3 182 34.6
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 5.3e-15 85.5 175 45.1
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 1.2e-14 84.3 188 43.1
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 1.6e-14 84.0 145 42.1
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 2.6e-14 83.2 187 38.5
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 5.9e-14 82.0 153 35.9
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 1.7e-13 80.5 155 34.8
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 2.2e-13 80.1 185 32.4
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 2.9e-13 79.7 176 43.2
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 1.1e-12 77.8 86 47.7
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 1.5e-12 77.4 161 31.7
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 2.5e-12 76.6 197 33.5
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 2.5e-12 76.6 152 37.5
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 3.2e-12 76.3 78 46.2
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 5.5e-12 75.5 164 31.7
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 2.7e-11 73.2 163 35.6
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 4.7e-11 72.4 151 34.4
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 8.0e-11 71.6 70 51.4
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 1.0e-10 71.2 163 31.9
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 3.0e-10 69.7 75 52.0
Zm00001eb157680 Zea mays HOM05D005169 ORTHO05D006436 1.5e-09 67.4 165 28.5
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 7.5e-09 65.1 82 43.9
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 7.5e-09 65.1 168 31.5
Duzib147G0144 Durio zibethinus HOM05D005169 ORTHO05D006436 1.3e-08 64.3 121 47.1
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 1.4e-07 60.8 70 48.6
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 1.4e-07 60.8 70 48.6
SEGI_21704 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 3.1e-07 59.7 171 28.1
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 7.0e-07 58.5 157 31.2
BcaC08g44071 Brassica carinata HOM05D005169 ORTHO05D006436 9.1e-07 58.2 28 89.3
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 2.0e-06 57.0 155 27.1
SEGI_19138 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 4.5e-06 55.8 147 25.9
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 4.5e-06 55.8 147 29.9


User provided reference genes

Program Settings