Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 3.3e-104 381.7 192 100.0
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 9.0e-78 293.9 192 75.0
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 9.0e-78 293.9 192 77.6
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 9.9e-77 290.4 181 77.9
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 5.6e-72 274.6 191 69.1
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.5e-69 266.5 169 75.1
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.5e-69 266.5 169 75.1
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 2.6e-69 265.8 182 69.8
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 1.0e-68 263.8 177 70.6
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 2.2e-68 262.7 177 71.2
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 2.2e-68 262.7 183 69.4
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 4.9e-68 261.5 177 70.1
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 8.4e-68 260.8 181 69.6
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 1.4e-67 260.0 177 70.1
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 1.9e-67 259.6 180 70.6
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.9e-67 259.6 178 68.5
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 2.5e-67 259.2 177 70.6
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 2.5e-67 259.2 180 70.6
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 2.5e-67 259.2 176 71.0
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 2.5e-67 259.2 182 69.2
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 2.5e-67 259.2 177 70.6
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 3.2e-67 258.8 180 70.6
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 4.2e-67 258.5 178 67.4
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 5.5e-67 258.1 170 71.8
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 7.1e-67 257.7 192 64.6
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 1.2e-66 256.9 177 69.5
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 1.2e-66 256.9 174 70.1
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 1.2e-66 256.9 173 69.9
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 1.6e-66 256.5 187 67.9
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 2.1e-66 256.1 186 65.1
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 2.1e-66 256.1 191 66.0
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 2.1e-66 256.1 175 70.9
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 4.6e-66 255.0 173 69.9
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 1.0e-65 253.8 174 68.4
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.0e-65 253.8 181 66.9
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 1.3e-65 253.4 182 68.1
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 1.8e-65 253.1 179 68.2
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 1.8e-65 253.1 177 70.6
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 2.3e-65 252.7 188 66.5
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 3.0e-65 252.3 166 71.1
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 3.0e-65 252.3 180 68.9
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 3.0e-65 252.3 174 68.4
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 3.0e-65 252.3 169 69.8
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 5.1e-65 251.5 170 68.2
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.5e-64 250.0 181 65.7
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 3.3e-64 248.8 176 68.2
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 3.3e-64 248.8 165 69.1
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 4.3e-64 248.4 174 67.2
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 9.7e-64 247.3 184 67.4
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 2.2e-63 246.1 168 69.0
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 2.8e-63 245.7 180 66.7
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 3.7e-63 245.4 192 62.5
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 1.4e-62 243.4 169 66.3
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 2.4e-62 242.7 164 68.3
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 3.1e-62 242.3 197 62.4
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 4.1e-62 241.9 177 65.0
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 6.9e-62 241.1 158 71.5
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 4.5e-61 238.4 161 68.9
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 4.5e-61 238.4 199 62.8
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 7.6e-61 237.7 158 71.5
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 7.6e-61 237.7 188 64.4
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 1.0e-60 237.3 194 60.3
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 3.8e-60 235.3 158 70.9
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 6.5e-60 234.6 178 63.5
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 1.9e-59 233.0 168 67.3
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 1.9e-59 233.0 192 58.9
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 4.2e-59 231.9 158 69.0
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 1.6e-58 229.9 165 65.5
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 3.6e-58 228.8 169 66.9
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 7.9e-58 227.6 170 66.5
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 1.4e-57 226.9 169 66.3
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 6.7e-57 224.6 166 65.7
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 1.5e-56 223.4 197 59.9
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 5.7e-56 221.5 156 68.6
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 2.8e-55 219.2 180 61.7
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 2.0e-53 213.0 161 62.1
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 2.6e-53 212.6 177 59.3
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 7.7e-53 211.1 170 62.4
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 2.2e-52 209.5 158 63.3
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 3.8e-52 208.8 138 70.3
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 4.2e-51 205.3 252 45.6
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 6.7e-49 198.0 161 55.3
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 9.7e-48 194.1 171 55.0
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 2.2e-47 193.0 156 56.4
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 3.7e-47 192.2 168 59.5
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 1.2e-45 187.2 164 57.3
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 1.2e-45 187.2 158 53.8
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 1.3e-44 183.7 125 69.6
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 1.2e-42 177.2 142 65.5
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 1.2e-42 177.2 165 51.5
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 3.9e-41 172.2 132 60.6
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 6.7e-41 171.4 120 70.0
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.5e-40 170.2 119 67.2
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 3.3e-40 169.1 120 65.8
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 4.4e-40 168.7 154 57.8
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 4.8e-39 165.2 151 55.6
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 2.6e-37 159.5 107 67.3
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 2.6e-37 159.5 110 66.4
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 1.0e-36 157.5 97 74.2
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 1.9e-35 153.3 122 61.5
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 2.5e-35 152.9 185 46.5
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 9.4e-35 151.0 109 62.4
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 3.6e-34 149.1 99 72.7
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 1.4e-33 147.1 88 79.5
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 2.6e-32 142.9 97 69.1
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 9.7e-32 141.0 107 63.6
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 2.4e-30 136.3 97 64.9
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 7.0e-30 134.8 119 55.5
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 2.7e-29 132.9 133 56.4
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 1.1e-27 127.5 75 81.3
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 9.4e-27 124.4 140 44.3
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 4.5e-21 105.5 155 36.1
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 2.3e-20 103.2 80 61.2
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 1.6e-18 97.1 95 51.6
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 6.1e-18 95.1 65 66.2
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 4.4e-16 89.0 49 85.7
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 2.3e-12 76.6 49 75.5
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 8.3e-07 58.2 36 77.8


User provided reference genes

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