Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 4.7e-113 411.4 235 100.0
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 1.1e-98 363.6 236 83.1
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 4.2e-45 185.7 248 46.4
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 7.2e-45 184.9 242 48.8
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 1.2e-44 184.1 242 46.3
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 2.1e-44 183.3 248 46.4
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 1.4e-43 180.6 231 48.1
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 3.0e-43 179.5 242 47.1
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 3.0e-43 179.5 237 47.3
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 3.3e-42 176.0 235 46.4
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 5.7e-42 175.3 104 80.8
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 5.7e-42 175.3 246 44.3
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 7.5e-42 174.9 230 47.0
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 1.3e-41 174.1 229 47.6
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 3.7e-41 172.6 109 73.4
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 1.1e-40 171.0 235 45.1
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.4e-40 170.6 243 46.9
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 1.4e-40 170.6 236 47.9
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 1.4e-40 170.6 238 47.1
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 1.8e-40 170.2 231 45.5
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 1.8e-40 170.2 236 48.7
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 2.4e-40 169.9 107 72.9
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 1.2e-39 167.5 238 43.7
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 1.2e-39 167.5 232 47.8
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 1.6e-39 167.2 235 46.4
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 2.7e-39 166.4 133 63.2
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 3.5e-39 166.0 232 44.0
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 4.5e-39 165.6 232 44.4
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 4.5e-39 165.6 160 56.2
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 5.9e-39 165.2 188 50.5
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 7.7e-39 164.9 233 44.2
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 1.0e-38 164.5 108 74.1
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 1.7e-38 163.7 235 48.5
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 2.2e-38 163.3 104 76.0
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 3.8e-38 162.5 235 43.4
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 5.0e-38 162.2 235 43.4
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 5.0e-38 162.2 235 43.4
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 5.0e-38 162.2 235 43.4
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 5.0e-38 162.2 106 72.6
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 6.5e-38 161.8 235 43.8
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 6.5e-38 161.8 246 45.9
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 1.5e-37 160.6 235 45.5
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 1.5e-37 160.6 236 46.6
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 2.5e-37 159.8 238 45.0
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 9.4e-37 157.9 162 54.3
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 1.2e-36 157.5 105 72.4
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.2e-36 157.5 105 72.4
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 1.6e-36 157.1 150 56.0
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 3.6e-36 156.0 269 40.1
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 4.7e-36 155.6 240 40.8
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 4.7e-36 155.6 105 70.5
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 4.7e-36 155.6 231 43.7
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 8.0e-36 154.8 106 72.6
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 1.4e-35 154.1 244 43.4
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 1.4e-35 154.1 242 44.2
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 1.8e-35 153.7 171 53.2
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.3e-35 153.3 105 70.5
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 3.0e-35 152.9 229 42.4
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 3.0e-35 152.9 104 67.3
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 3.0e-35 152.9 244 40.6
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 4.0e-35 152.5 303 37.0
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 4.0e-35 152.5 101 71.3
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 6.8e-35 151.8 240 40.4
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 8.8e-35 151.4 111 64.9
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 4.4e-34 149.1 240 39.6
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 9.8e-34 147.9 107 68.2
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 3.7e-33 146.0 235 41.7
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 4.8e-33 145.6 243 43.2
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 4.8e-33 145.6 105 66.7
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 6.3e-33 145.2 106 63.2
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 6.3e-33 145.2 106 67.0
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 8.3e-33 144.8 241 39.4
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 1.1e-32 144.4 167 49.1
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 3.1e-32 142.9 105 65.7
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 7.0e-32 141.7 105 65.7
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 7.0e-32 141.7 243 39.5
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 1.6e-31 140.6 229 40.2
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 7.7e-31 138.3 104 61.5
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 2.5e-29 133.3 105 62.9
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 8.8e-27 124.8 106 57.5
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 5.7e-26 122.1 88 67.0
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 9.8e-26 121.3 112 57.1
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 2.8e-25 119.8 100 60.0
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 1.1e-24 117.9 107 54.2
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 1.2e-23 114.4 180 41.1
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 1.7e-22 110.5 244 34.8
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 6.6e-22 108.6 229 38.4
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 8.6e-22 108.2 85 61.2
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 1.1e-21 107.8 184 38.0
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 6.1e-20 102.1 190 35.8
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 1.2e-18 97.8 106 46.2
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 4.4e-18 95.9 104 52.9
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 7.5e-18 95.1 174 33.3
SEGI_14624 Sequoiadendron giganteum HOM05D007702 ORTHO05D009736 3.0e-14 83.2 185 32.4
FAN07G0391 Fragaria x ananassa HOM05D007702 ORTHO05D009736 1.8e-11 73.9 53 67.9
FAN10G3703 Fragaria x ananassa HOM05D007702 ORTHO05D009736 2.3e-11 73.6 53 66.0
Dinv37777 Davidia involucrata HOM05D000532 ORTHO05D002745 2.9e-09 66.6 34 82.4
FAN02G1843 Fragaria x ananassa HOM05D007702 ORTHO05D009736 1.9e-08 63.9 60 55.0


User provided reference genes

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