Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1931.8 1059 100.0
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1865.1 1060 96.5
TAR383G1047 Trochodendron aralioides HOM05D003881 ORTHO05D004343 0.0e+00 1558.9 1079 77.9
Nn8g38678 Nelumbo nucifera HOM05D003881 ORTHO05D004343 0.0e+00 1554.7 1045 78.2
MBI19_g11836_MAGBIO Magnolia biondii HOM05D003881 ORTHO05D004343 0.0e+00 1513.0 1043 76.2
CSS0040077 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 0.0e+00 1488.0 1046 74.8
Aqoxy5G02361 Aquilegia oxysepala HOM05D003881 ORTHO05D004343 0.0e+00 1487.6 1074 74.2
Dinv42377 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1474.5 1031 76.8
CDE06G1176 Ceratophyllum demersum HOM05D003881 ORTHO05D004343 0.0e+00 1474.1 1035 77.5
CsaV3_1G040850 Cucumis sativus L. HOM05D003881 ORTHO05D004343 0.0e+00 1452.2 1078 72.2
Psat1g133400 Pisum sativum HOM05D003881 ORTHO05D004343 0.0e+00 1450.3 1072 73.6
GSVIVG01015096001 Vitis vinifera HOM05D003881 ORTHO05D004343 0.0e+00 1449.9 1042 75.2
CiPaw.03G207700 Carya illinoinensis HOM05D003881 ORTHO05D004343 0.0e+00 1445.6 1046 74.0
Lj6g0005202 Lotus japonicus HOM05D003881 ORTHO05D004343 0.0e+00 1444.9 1072 75.0
MELO3C015512.2 Cucumis melo HOM05D003881 ORTHO05D004343 0.0e+00 1441.8 1078 72.0
Eucgr.C00824 Eucalyptus grandis HOM05D003881 ORTHO05D004343 0.0e+00 1440.6 1072 73.7
Ca_26333_v3 Cicer arietinum L. HOM05D003881 ORTHO05D004343 0.0e+00 1438.7 1038 74.3
Prupe.7G201100 Prunus persica HOM05D003881 ORTHO05D004343 0.0e+00 1438.3 1035 74.1
CANSAT56G1084 Cannabis sativa HOM05D003881 ORTHO05D004343 0.0e+00 1437.9 1045 73.5
Sed0009854 Sechium edule HOM05D003881 ORTHO05D004343 0.0e+00 1437.9 1044 74.6
Rhsim03G0228800 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1436.4 1047 72.5
CAN.G457.4 Capsicum annuum HOM05D003881 ORTHO05D004343 0.0e+00 1429.1 1062 72.9
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1428.7 1072 73.4
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1428.7 1090 72.5
Rhsim01G0044500 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1427.2 1067 70.9
Glyma.09G068600 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1425.6 1074 74.1
Phvul.009G228100 Phaseolus vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1424.5 1045 74.2
Lalb_Chr11g0074291 Lupinus albus HOM05D003881 ORTHO05D004343 0.0e+00 1419.1 1039 74.7
Medtr2g041420 Medicago truncatula HOM05D003881 ORTHO05D004343 0.0e+00 1418.3 1039 73.3
HanXRQChr12g0354081 Helianthus annuus HOM05D003881 ORTHO05D004343 0.0e+00 1414.8 1051 72.8
ClCG03G015190 Citrullus lanatus HOM05D003881 ORTHO05D004343 0.0e+00 1414.1 1058 72.0
COL.COLO4_18111 Corchorus olitorius HOM05D003881 ORTHO05D004343 0.0e+00 1412.5 1033 75.0
TWI34G0082 Tripterygium wilfordii HOM05D003881 ORTHO05D004343 0.0e+00 1411.0 1038 72.0
ECA232G2980 Erigeron canadensis HOM05D003881 ORTHO05D004343 0.0e+00 1407.5 1047 71.1
Dinv25567 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1406.7 1047 72.3
Potri.006G143300 Populus trichocarpa HOM05D003881 ORTHO05D004343 0.0e+00 1406.0 1079 70.7
MSTRG.26461 Avicennia marina HOM05D003881 ORTHO05D004343 0.0e+00 1404.0 1071 71.1
Ciclev10007295m.g Citrus clementina HOM05D003881 ORTHO05D004343 0.0e+00 1396.7 1073 72.2
FAN26G0375 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1395.2 1073 70.8
Lj7A685T51 Lonicera japonica HOM05D003881 ORTHO05D004343 0.0e+00 1394.8 974 72.7
Glyma.15G176400 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1394.0 1071 71.1
ATR0598G033 Amborella trichopoda HOM05D003881 ORTHO05D004343 0.0e+00 1393.6 942 75.7
Lsat_1_v5_gn_5_141221 Lactuca sativa HOM05D003881 ORTHO05D004343 0.0e+00 1392.1 974 72.7
Manes.16G096500 Manihot esculenta HOM05D003881 ORTHO05D004343 0.0e+00 1390.2 986 74.6
Sabra06G0113500 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1389.4 1079 70.3
Sabra06G0112200 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1388.6 1079 70.3
Atru.chr7.1693 Acer truncatum HOM05D003881 ORTHO05D004343 0.0e+00 1387.9 1080 71.3
Cfa003017 Carpinus fangiana HOM05D003881 ORTHO05D004343 0.0e+00 1386.3 1077 70.0
Gohir.A07G014800 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1386.3 870 78.9
Gorai.001G015300 Gossypium raimondii HOM05D003881 ORTHO05D004343 0.0e+00 1385.9 870 79.0
Sc14g0000600 Simmondsia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1385.9 1040 72.3
Actinidia29923 Actinidia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1384.8 947 75.4
THA.LOC104815327 Tarenaya hassleriana HOM05D003881 ORTHO05D004343 0.0e+00 1384.8 932 75.1
Gohir.D07G014500 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1384.0 870 78.9
Thecc.09G079000 Theobroma cacao HOM05D003881 ORTHO05D004343 0.0e+00 1381.7 868 79.1
FAN19G1850 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1380.5 1030 72.1
FAN26G1433 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1375.5 1113 68.3
PGR142G3183 Punica granatum HOM05D003881 ORTHO05D004343 0.0e+00 1370.5 1045 71.7
BcaB08g34515 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1367.8 943 73.5
DCAR_031930 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1367.8 1056 69.6
AL3G43760 Arabidopsis lyrata HOM05D003881 ORTHO05D004343 0.0e+00 1367.4 1055 70.8
Carub.0003s2725 Capsella rubella HOM05D003881 ORTHO05D004343 0.0e+00 1366.7 943 73.9
FvH4_1g08430 Fragaria vesca HOM05D003881 ORTHO05D004343 0.0e+00 1360.9 1030 71.2
Thhalv10002377m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 0.0e+00 1360.5 1036 70.4
FAN28G2111 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1360.5 1032 70.9
Rhsim01G0044300 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1360.5 1047 69.7
Haze_25994 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1360.1 1104 68.3
TPR.G28668 Trifolium pratense HOM05D003881 ORTHO05D004343 0.0e+00 1358.2 1035 70.5
Sp3g24670 Schrenkiella parvula HOM05D003881 ORTHO05D004343 0.0e+00 1357.4 943 72.4
A03p44780 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1351.7 943 73.3
BraA03t13613Z Brassica rapa HOM05D003881 ORTHO05D004343 0.0e+00 1351.7 943 73.3
C03p55630 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1350.5 943 73.3
BolC3t17840H Brassica oleracea HOM05D003881 ORTHO05D004343 0.0e+00 1350.5 943 73.3
MD02G1088500 Malus domestica HOM05D003881 ORTHO05D004343 0.0e+00 1349.7 1075 68.5
Hund26018 Selenicereus undatus HOM05D003881 ORTHO05D004343 0.0e+00 1347.8 1031 69.9
Aa31sc133G100 Aethionema arabicum HOM05D003881 ORTHO05D004343 0.0e+00 1343.2 973 71.7
AUR62028984 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1334.3 1039 68.9
BcaC01g03143 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1331.2 895 74.9
RcHm_v2.0_Chr2g0094531 Rosa chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1327.8 1072 68.5
Haze_25986 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1322.4 1104 67.1
SEGI_24391 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 0.0e+00 1320.8 1030 69.1
SGA_v2.0_scaffold21G09481 Striga asiatica HOM05D003881 ORTHO05D004343 0.0e+00 1318.9 1096 67.8
Nitab4.5_0000343g0070 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1316.2 1106 68.2
Duzib168G2095 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1308.5 870 75.5
Oeu018066.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1306.6 1065 67.1
QL11p000475 Quercus lobata HOM05D003881 ORTHO05D004343 0.0e+00 1303.9 1152 63.8
Ah.14g084990 Amaranthus hybridus HOM05D003881 ORTHO05D004343 0.0e+00 1299.3 1043 67.2
Migut.L01552 Erythranthe guttata HOM05D003881 ORTHO05D004343 0.0e+00 1298.9 1064 66.6
Cc06_g12030 Coffea canephora HOM05D003881 ORTHO05D004343 0.0e+00 1297.0 1057 67.8
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1288.1 1158 62.8
AUR62025189 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1261.9 894 71.6
DCAR_024741 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1251.9 1207 59.3
Nitab4.5_0001488g0030 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1240.7 1024 67.8
Duzib150G0508 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1231.5 1079 66.5
SalBow4G1287 Salvia bowleyana HOM05D003881 ORTHO05D004343 0.0e+00 1229.5 1092 64.2
vmacro06329 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 0.0e+00 1229.2 899 70.2
Oeu041279.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1219.9 1045 61.6
Mapoly0010s0036 Marchantia polymorpha HOM05D003881 ORTHO05D004343 0.0e+00 1211.8 883 67.4
Zm00001eb073540 Zea mays HOM05D003881 ORTHO05D004343 0.0e+00 1198.0 1054 60.7
SMO143G0189 Selaginella moellendorffii HOM05D003881 ORTHO05D004343 0.0e+00 1191.0 887 65.5
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis HOM05D003881 ORTHO05D004343 0.0e+00 1141.3 866 64.7
Solyc07g041510.3 Solanum lycopersicum HOM05D003881 ORTHO05D004343 1.5e-304 1049.7 692 76.3
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 2.0e-304 1049.3 690 76.4
unitig_8.g3529 Utricularia gibba HOM05D003881 ORTHO05D004343 3.0e-300 1035.4 1039 58.1
Pp3c3_17140 Physcomitrium patens HOM05D003881 ORTHO05D004343 4.2e-278 961.8 740 63.5
TAR383G0903 Trochodendron aralioides HOM05D003881 ORTHO05D004343 8.0e-261 904.4 544 80.7
Peaxi162Scf00127g00019 Petunia axillaris HOM05D003881 ORTHO05D004343 1.4e-257 893.6 690 67.8
Cpa.g.sc28.63 Carica papaya HOM05D003881 ORTHO05D004343 3.4e-251 872.5 633 70.0
CARHR103800 Cardamine hirsuta HOM05D003881 ORTHO05D004343 2.4e-241 839.7 626 69.5
HPP92_007226 Vanilla planifolia HOM05D003881 ORTHO05D004343 3.8e-194 682.9 573 62.3
TAR383G0300 Trochodendron aralioides HOM05D003881 ORTHO05D004343 3.8e-178 629.8 493 76.9
Os07g0476200 Oryza sativa ssp. japonica HOM05D003881 ORTHO05D004343 5.2e-159 566.2 396 71.0
CARHR103810 Cardamine hirsuta HOM05D003881 ORTHO05D004343 1.0e-143 515.4 318 80.5
SEGI_36108 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.4e-126 457.2 451 56.3
CBR_g74629 Chara braunii HOM05D003881 ORTHO05D004343 3.9e-122 443.7 368 58.4
Sopen07g021070 Solanum pennellii HOM05D003881 ORTHO05D004343 3.5e-115 420.6 376 71.3
Peaxi162Scf00127g00018 Petunia axillaris HOM05D003881 ORTHO05D004343 2.2e-109 401.4 280 73.9
MCO14G023 Micromonas commoda HOM05D003881 ORTHO05D004343 5.1e-90 337.0 1040 28.1
SHI23794 Sapria himalayana HOM05D003881 ORTHO05D004343 2.4e-87 328.2 324 54.9
QL01p053501 Quercus lobata HOM05D003881 ORTHO05D004343 4.2e-84 317.4 236 67.8
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 1.6e-80 305.4 266 62.0
Cre03.g189605 Chlamydomonas reinhardtii HOM05D003881 ORTHO05D004343 8.2e-80 303.1 1032 26.3
Psat4g185720 Pisum sativum HOM05D003881 ORTHO05D004343 2.4e-79 301.6 207 74.4
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 2.4e-79 301.6 278 57.6
ATR0684G009 Amborella trichopoda HOM05D003881 ORTHO05D004343 2.1e-67 261.9 387 42.1
Zm00001eb329800 Zea mays HOM05D003881 ORTHO05D004343 1.7e-61 242.3 190 63.7
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 4.8e-56 224.2 187 62.6
Thhalv10002929m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 2.2e-48 198.7 217 52.1
SEGI_33062 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.8e-47 195.7 145 63.4
CSS0024068 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 7.2e-44 183.7 99 86.9
ATR0193G031 Amborella trichopoda HOM05D003881 ORTHO05D004343 6.1e-43 180.6 108 80.6
MD15G1215900 Malus domestica HOM05D003881 ORTHO05D004343 1.7e-40 172.6 243 48.1
HPP92_012481 Vanilla planifolia HOM05D003881 ORTHO05D004343 2.4e-39 168.7 149 59.1
ATR0193G014 Amborella trichopoda HOM05D003881 ORTHO05D004343 5.4e-39 167.5 106 78.3
CBR_g74627 Chara braunii HOM05D003881 ORTHO05D004343 7.0e-39 167.2 221 43.0
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.6e-38 166.0 480 29.8
Lsat_1_v5_gn_3_15640 Lactuca sativa HOM05D003881 ORTHO05D004343 2.3e-37 162.2 103 71.8
SEGI_35060 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 6.6e-37 160.6 121 67.8
SEGI_29160 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.1e-35 155.6 119 62.2
Psat1g224080 Pisum sativum HOM05D003881 ORTHO05D004343 4.0e-34 151.4 89 82.0
Psat0s7528g0040 Pisum sativum HOM05D003881 ORTHO05D004343 9.5e-28 130.2 150 51.3
Actinidia38472 Actinidia chinensis HOM05D003881 ORTHO05D004343 1.2e-27 129.8 231 36.8
HPP92_006853 Vanilla planifolia HOM05D003881 ORTHO05D004343 4.7e-27 127.9 82 82.9
Psat1g059560 Pisum sativum HOM05D003881 ORTHO05D004343 6.1e-27 127.5 150 50.7
ATR0684G059 Amborella trichopoda HOM05D003881 ORTHO05D004343 4.0e-26 124.8 93 67.7
Hma1.2p1_0528F.1_g173040 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 6.8e-26 124.0 108 61.1
Hma1.2p1_0980F.1_g243635 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 6.8e-26 124.0 108 61.1
Hma1.2p1_1385F.1_g279633 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 6.8e-26 124.0 108 61.1
Psat1g034120 Pisum sativum HOM05D003881 ORTHO05D004343 4.9e-24 117.9 86 69.8
HPP92_006870 Vanilla planifolia HOM05D003881 ORTHO05D004343 3.5e-22 111.7 72 80.6
Hma1.2p1_0508F.1_g168780 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 7.8e-22 110.5 79 64.6
SEGI_23032 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 5.0e-21 107.8 69 76.8
SEGI_15507 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.5e-20 105.5 79 64.6
Hma1.2p1_0430F.1_g151320 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 7.3e-20 104.0 62 77.4
vmacro22673 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 1.8e-18 99.4 257 36.6
HPP92_028483 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.8e-18 99.4 62 69.4
Rhsim03G0229000 Rhododendron simsii HOM05D003881 ORTHO05D004343 6.8e-18 97.4 84 66.7
SEGI_26438 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.4e-17 95.1 59 74.6
SEGI_11752 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.2e-16 92.4 134 43.3
SEGI_39855 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 4.9e-16 91.3 72 68.1
TPR.G10985 Trifolium pratense HOM05D003881 ORTHO05D004343 5.4e-15 87.8 47 93.6
RcHm_v2.0_Chr5g0007121 Rosa chinensis HOM05D003881 ORTHO05D004343 3.9e-13 81.6 51 74.5
ATR0193G048 Amborella trichopoda HOM05D003881 ORTHO05D004343 4.3e-12 78.2 120 40.0
HPP92_012555 Vanilla planifolia HOM05D003881 ORTHO05D004343 8.1e-11 73.9 44 81.8
BolC7t41346H Brassica oleracea HOM05D003881 ORTHO05D004343 1.8e-10 72.8 79 51.9
CBR_g74625 Chara braunii HOM05D003881 ORTHO05D004343 4.0e-10 71.6 66 57.6
C07p09280 Brassica napus HOM05D003881 ORTHO05D004343 4.4e-09 68.2 79 49.4
Lalb_Chr07g0195581 Lupinus albus HOM05D003469 ORTHO05D004084 3.7e-08 65.1 289 21.8
Psat6g098400 Pisum sativum HOM05D003881 ORTHO05D004343 1.4e-07 63.2 62 51.6
PRCOL_00001933 Prasinoderma coloniale HOM05D026299 ORTHO05D028720 3.2e-07 62.0 265 22.6
FAN09G4617 Fragaria x ananassa HOM05D003469 ORTHO05D004084 5.4e-07 61.2 160 26.9
MCO11G359 Micromonas commoda HOM05D026299 ORTHO05D028720 1.6e-06 59.7 227 22.5
Phvul.011G031000 Phaseolus vulgaris HOM05D003469 ORTHO05D004084 1.6e-06 59.7 383 20.1
FAN02G0848 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.7e-06 58.9 157 26.8
FAN14G5376 Fragaria x ananassa HOM05D003469 ORTHO05D004084 3.5e-06 58.5 160 26.2
SEGI_25641 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.5e-06 58.5 38 73.7
FvH4_6g38030 Fragaria vesca HOM05D003469 ORTHO05D004084 4.6e-06 58.2 160 25.6
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 4.6e-06 58.2 294 22.1
SEGI_25041 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 4.6e-06 58.2 47 55.3
Medtr5g004660 Medicago truncatula HOM05D005978 ORTHO05D007472 6.0e-06 57.8 219 26.5
SEGI_17061 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 7.8e-06 57.4 45 62.2


User provided reference genes

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