Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO135G0726 Papaver somniferum HOM05D005241 ORTHO05D005862 5.7e-194 680.6 318 100.0
PSO384G2580 Papaver somniferum HOM05D005241 ORTHO05D005862 5.5e-181 637.5 318 94.0
PSO135G0092 Papaver somniferum HOM05D005241 ORTHO05D005862 3.1e-168 595.1 316 87.0
PSO384G1775 Papaver somniferum HOM05D005241 ORTHO05D005862 9.1e-168 593.6 315 87.6
PSO135G0552 Papaver somniferum HOM05D005241 ORTHO05D005862 5.0e-166 587.8 317 86.8
Aqoxy4G03021 Aquilegia oxysepala HOM05D005241 ORTHO05D005862 1.3e-150 536.6 313 77.3
Dinv41292 Davidia involucrata HOM05D005241 ORTHO05D005862 2.3e-150 535.8 310 76.5
Nn7g37052 Nelumbo nucifera HOM05D005241 ORTHO05D005862 8.6e-150 533.9 310 75.5
TAR629G1464 Trochodendron aralioides HOM05D005241 ORTHO05D005862 8.6e-150 533.9 310 77.1
Actinidia24021 Actinidia chinensis HOM05D005241 ORTHO05D005862 2.5e-149 532.3 311 75.6
Gohir.D06G047501 Gossypium hirsutum HOM05D005241 ORTHO05D005862 4.2e-149 531.6 308 76.3
Atru.chr7.554 Acer truncatum HOM05D005241 ORTHO05D005862 1.2e-148 530.0 310 76.8
Gohir.A06G047300 Gossypium hirsutum HOM05D005241 ORTHO05D005862 1.2e-148 530.0 310 75.8
Gorai.010G053100 Gossypium raimondii HOM05D005241 ORTHO05D005862 1.2e-148 530.0 309 76.4
Duzib150G1634 Durio zibethinus HOM05D005241 ORTHO05D005862 1.0e-147 526.9 310 76.1
MBI18_g28946_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 1.0e-147 526.9 310 76.1
Sopen12g007320 Solanum pennellii HOM05D005241 ORTHO05D005862 1.8e-147 526.2 310 75.5
THA.LOC104813533 Tarenaya hassleriana HOM05D005241 ORTHO05D005862 5.2e-147 524.6 310 75.8
CiPaw.07G187700 Carya illinoinensis HOM05D005241 ORTHO05D005862 2.6e-146 522.3 310 75.8
Solyc12g014440.2 Solanum lycopersicum HOM05D005241 ORTHO05D005862 2.6e-146 522.3 310 75.5
CSS0029475 Camellia sinensis var. sinensis HOM05D005241 ORTHO05D005862 3.4e-146 521.9 311 74.3
ATR0796G313 Amborella trichopoda HOM05D005241 ORTHO05D005862 4.4e-146 521.5 311 76.2
COL.COLO4_16080 Corchorus olitorius HOM05D005241 ORTHO05D005862 4.4e-146 521.5 310 76.5
Dinv42767 Davidia involucrata HOM05D005241 ORTHO05D005862 1.3e-145 520.0 310 75.8
Dinv43336 Davidia involucrata HOM05D005241 ORTHO05D005862 1.3e-145 520.0 310 75.8
CDE10G0441 Ceratophyllum demersum HOM05D005241 ORTHO05D005862 2.2e-145 519.2 310 74.8
Manes.06G028800 Manihot esculenta HOM05D005241 ORTHO05D005862 3.7e-145 518.5 310 74.8
PGR102G1178 Punica granatum HOM05D005241 ORTHO05D005862 3.7e-145 518.5 306 74.5
Lsat_1_v5_gn_8_65460 Lactuca sativa HOM05D005241 ORTHO05D005862 6.3e-145 517.7 310 75.5
Thecc.09G163500 Theobroma cacao HOM05D005241 ORTHO05D005862 6.3e-145 517.7 310 74.5
Ca_21190_v3 Cicer arietinum L. HOM05D005241 ORTHO05D005862 1.1e-144 516.9 310 74.2
HanXRQChr06g0178861 Helianthus annuus HOM05D005241 ORTHO05D005862 1.8e-144 516.2 310 75.5
MSTRG.19688 Avicennia marina HOM05D005241 ORTHO05D005862 2.4e-144 515.8 312 73.1
Glyma.13G092800 Glycine max HOM05D005241 ORTHO05D005862 2.4e-144 515.8 310 76.1
Glyma.17G067600 Glycine max HOM05D005241 ORTHO05D005862 2.4e-144 515.8 310 74.8
Ciclev10008429m.g Citrus clementina HOM05D005241 ORTHO05D005862 3.1e-144 515.4 314 74.5
COL.COLO4_16078 Corchorus olitorius HOM05D005241 ORTHO05D005862 4.1e-144 515.0 304 75.3
ECA236G3445 Erigeron canadensis HOM05D005241 ORTHO05D005862 4.1e-144 515.0 311 75.2
TWI34G1734 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 4.1e-144 515.0 309 74.1
SalBow6G2881 Salvia bowleyana HOM05D005241 ORTHO05D005862 5.4e-144 514.6 312 74.7
Haze_22151 Corylus avellana HOM05D005241 ORTHO05D005862 7.0e-144 514.2 304 75.7
FAN07G2217 Fragaria x ananassa HOM05D005241 ORTHO05D005862 7.0e-144 514.2 310 73.5
RcHm_v2.0_Chr4g0404611 Rosa chinensis HOM05D005241 ORTHO05D005862 7.0e-144 514.2 310 73.9
DCAR_014714 Daucus carota HOM05D005241 ORTHO05D005862 1.2e-143 513.5 309 73.5
QL02p096102 Quercus lobata HOM05D005241 ORTHO05D005862 1.2e-143 513.5 304 76.0
FAN17G0752 Fragaria x ananassa HOM05D005241 ORTHO05D005862 1.6e-143 513.1 310 73.2
TWI34G0564 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 1.6e-143 513.1 309 73.8
Oeu043521.1 Olea europaea HOM05D005241 ORTHO05D005862 3.5e-143 511.9 310 73.5
Phvul.003G150200 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 3.5e-143 511.9 309 74.8
Phvul.003G150000 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 5.9e-143 511.1 308 74.7
vmacro13085 Vaccinium macrocarpon HOM05D005241 ORTHO05D005862 5.9e-143 511.1 310 73.2
Medtr4g129200 Medicago truncatula HOM05D005241 ORTHO05D005862 7.8e-143 510.8 312 74.4
VMungo1215G3242 Vigna mungo HOM05D005241 ORTHO05D005862 7.8e-143 510.8 310 74.5
Hund09015 Selenicereus undatus HOM05D005241 ORTHO05D005862 1.0e-142 510.4 314 73.9
FvH4_4g09810 Fragaria vesca HOM05D005241 ORTHO05D005862 1.3e-142 510.0 310 73.2
FAN12G0682 Fragaria x ananassa HOM05D005241 ORTHO05D005862 1.3e-142 510.0 310 73.2
Thecc.09G163700 Theobroma cacao HOM05D005241 ORTHO05D005862 1.3e-142 510.0 310 73.9
Lj9A730T54 Lonicera japonica HOM05D005241 ORTHO05D005862 2.3e-142 509.2 304 74.3
Potri.018G097100 Populus trichocarpa HOM05D005241 ORTHO05D005862 2.9e-142 508.8 308 73.7
CANSAT11G2449 Cannabis sativa HOM05D005241 ORTHO05D005862 5.0e-142 508.1 309 73.8
TPR.G5349 Trifolium pratense HOM05D005241 ORTHO05D005862 5.0e-142 508.1 310 73.2
arahy.Tifrunner.gnm1.ann1.RWXM46 Arachis hypogaea HOM05D005241 ORTHO05D005862 8.6e-142 507.3 310 75.2
SalBow6G2671 Salvia bowleyana HOM05D005241 ORTHO05D005862 8.6e-142 507.3 313 74.4
AL8G33730 Arabidopsis lyrata HOM05D005241 ORTHO05D005862 1.1e-141 506.9 310 75.8
SGA_v2.0_scaffold66G22503 Striga asiatica HOM05D005241 ORTHO05D005862 1.1e-141 506.9 313 72.8
Sp6g19390 Schrenkiella parvula HOM05D005241 ORTHO05D005862 1.5e-141 506.5 310 75.2
unitig_0.g567 Utricularia gibba HOM05D005241 ORTHO05D005862 1.5e-141 506.5 310 72.3
Psat4g010840 Pisum sativum HOM05D005241 ORTHO05D005862 4.3e-141 505.0 314 72.3
Cc06_g13790 Coffea canephora HOM05D005241 ORTHO05D005862 5.6e-141 504.6 307 75.2
MD13G1261500 Malus domestica HOM05D005241 ORTHO05D005862 9.5e-141 503.8 310 71.9
Os07g0516000 Oryza sativa ssp. japonica HOM05D005241 ORTHO05D005862 9.5e-141 503.8 311 71.4
A03p12620 Brassica napus HOM05D005241 ORTHO05D005862 1.2e-140 503.4 310 73.5
C03p14830 Brassica napus HOM05D005241 ORTHO05D005862 1.6e-140 503.1 310 73.5
Gohir.A05G345818 Gossypium hirsutum HOM05D005241 ORTHO05D005862 2.1e-140 502.7 316 71.8
CsaV3_1G029530 Cucumis sativus L. HOM05D005241 ORTHO05D005862 2.8e-140 502.3 309 71.8
BraA03t10577Z Brassica rapa HOM05D005241 ORTHO05D005862 4.7e-140 501.5 310 73.5
Lalb_Chr07g0180161 Lupinus albus HOM05D005241 ORTHO05D005862 4.7e-140 501.5 310 72.9
AT5G57700 Arabidopsis thaliana HOM05D005241 ORTHO05D005862 6.1e-140 501.1 310 74.8
BolC3t13925H Brassica oleracea HOM05D005241 ORTHO05D005862 6.1e-140 501.1 310 73.5
Thhalv10013983m.g Eutrema salsugineum HOM05D005241 ORTHO05D005862 1.4e-139 500.0 310 74.8
arahy.Tifrunner.gnm1.ann1.4YP8RP Arachis hypogaea HOM05D005241 ORTHO05D005862 1.8e-139 499.6 304 75.3
CARHR271450 Cardamine hirsuta HOM05D005241 ORTHO05D005862 1.8e-139 499.6 310 73.9
Lj4g0014860 Lotus japonicus HOM05D005241 ORTHO05D005862 1.8e-139 499.6 304 74.0
Lalb_Chr07g0180171 Lupinus albus HOM05D005241 ORTHO05D005862 4.0e-139 498.4 310 70.6
Medtr4g129180 Medicago truncatula HOM05D005241 ORTHO05D005862 6.8e-139 497.7 310 71.9
Psat4g010800 Pisum sativum HOM05D005241 ORTHO05D005862 2.6e-138 495.7 308 72.1
Rhsim01G0009500 Rhododendron simsii HOM05D005241 ORTHO05D005862 2.6e-138 495.7 304 72.0
ClCG06G012960 Citrullus lanatus HOM05D005241 ORTHO05D005862 3.4e-138 495.4 309 72.8
Sabra18G0084300 Salix brachista HOM05D005241 ORTHO05D005862 1.3e-137 493.4 304 73.0
Aa31LG3G13540 Aethionema arabicum HOM05D005241 ORTHO05D005862 2.2e-137 492.7 312 72.1
Gorai.012G095700 Gossypium raimondii HOM05D005241 ORTHO05D005862 2.9e-137 492.3 310 72.6
Eucgr.C02440 Eucalyptus grandis HOM05D005241 ORTHO05D005862 7.0e-136 487.6 306 70.6
Gohir.D04G085700 Gossypium hirsutum HOM05D005241 ORTHO05D005862 9.2e-136 487.3 310 71.6
Lj4g0023001 Lotus japonicus HOM05D005241 ORTHO05D005862 3.5e-135 485.3 321 69.8
EL10Ac8g18255 Beta vulgaris HOM05D005241 ORTHO05D005862 1.3e-134 483.4 308 73.7
Os07g0516050 Oryza sativa ssp. japonica HOM05D005241 ORTHO05D005862 3.0e-134 482.3 315 68.6
HPP92_013485 Vanilla planifolia HOM05D005241 ORTHO05D005862 8.6e-134 480.7 311 70.4
AUR62040288 Chenopodium quinoa HOM05D005241 ORTHO05D005862 1.9e-133 479.6 308 73.4
Glyma.13G092900 Glycine max HOM05D005241 ORTHO05D005862 4.3e-133 478.4 310 71.3
SEGI_10163 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 9.5e-133 477.2 311 68.5
Peaxi162Scf00078g00547 Petunia axillaris HOM05D005241 ORTHO05D005862 2.3e-131 472.6 304 70.7
Nitab4.5_0000168g0090 Nicotiana tabacum HOM05D005241 ORTHO05D005862 3.0e-126 455.7 312 68.9
Nitab4.5_0006743g0030 Nicotiana tabacum HOM05D005241 ORTHO05D005862 1.6e-124 449.9 312 67.6
Mapoly0080s0044 Marchantia polymorpha HOM05D005241 ORTHO05D005862 4.7e-124 448.4 310 64.8
Sc08g0005390 Simmondsia chinensis HOM05D005241 ORTHO05D005862 8.9e-123 444.1 313 67.7
SMO351G0057 Selaginella moellendorffii HOM05D005241 ORTHO05D005862 3.4e-122 442.2 305 64.6
AUR62039979 Chenopodium quinoa HOM05D005241 ORTHO05D005862 3.9e-118 428.7 305 61.3
Zm00001eb105910 Zea mays HOM05D005241 ORTHO05D005862 3.9e-118 428.7 288 66.3
Peaxi162Scf00339g00098 Petunia axillaris HOM05D005241 ORTHO05D005862 5.1e-118 428.3 306 66.3
Zm00001eb105960 Zea mays HOM05D005241 ORTHO05D005862 5.1e-118 428.3 277 67.1
PGSC0003DMG400012851 Solanum tuberosum HOM05D005241 ORTHO05D005862 9.5e-117 424.1 304 65.8
HPP92_026039 Vanilla planifolia HOM05D005241 ORTHO05D005862 1.6e-116 423.3 311 64.0
EL10Ac8g18254 Beta vulgaris HOM05D005241 ORTHO05D005862 6.4e-113 411.4 313 58.5
Hma1.2p1_0921F.1_g236680 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 9.2e-112 407.5 329 60.5
Hma1.2p1_2604F.1_g325280 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 9.2e-112 407.5 329 60.5
Pp3c3_37310 Physcomitrium patens HOM05D005241 ORTHO05D005862 1.6e-111 406.8 305 59.0
FAN22G1361 Fragaria x ananassa HOM05D005241 ORTHO05D005862 6.0e-111 404.8 439 48.7
Sed0027242 Sechium edule HOM05D005241 ORTHO05D005862 4.7e-108 395.2 231 76.2
Hund26388 Selenicereus undatus HOM05D005241 ORTHO05D005862 6.9e-107 391.3 310 59.4
Migut.J01437 Erythranthe guttata HOM05D005241 ORTHO05D005862 4.2e-96 355.5 210 77.6
Cpa.g.sc450.6 Carica papaya HOM05D005241 ORTHO05D005862 4.0e-91 339.0 202 74.3
Carub.0008s1821 Capsella rubella HOM05D005241 ORTHO05D005862 3.4e-90 335.9 200 74.5
SEGI_04095 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 7.9e-87 324.7 243 62.6
MELO3C029512.2 Cucumis melo HOM05D005241 ORTHO05D005862 2.6e-82 309.7 250 59.2
Prupe.1G095300 Prunus persica HOM05D005241 ORTHO05D005862 2.3e-78 296.6 165 77.6
EL10Ac9g22414 Beta vulgaris HOM05D005241 ORTHO05D005862 8.7e-78 294.7 305 47.2
TPR.G40451 Trifolium pratense HOM05D005241 ORTHO05D005862 4.1e-75 285.8 176 72.7
TPR.G5299 Trifolium pratense HOM05D005241 ORTHO05D005862 9.0e-75 284.6 184 70.1
Nitab4.5_0000692g0020 Nicotiana tabacum HOM05D005241 ORTHO05D005862 3.7e-68 262.7 306 47.4
EL10Ac7g17876 Beta vulgaris HOM05D005241 ORTHO05D005862 2.0e-45 187.2 209 43.1
MELO3C017513.2 Cucumis melo HOM05D005241 ORTHO05D005862 2.7e-42 176.8 97 76.3
MBI18_g46216_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 8.0e-39 165.2 99 76.8
Hund09002 Selenicereus undatus HOM05D000185 ORTHO05D000105 4.4e-37 159.5 99 70.7
Glyma.17G067650 Glycine max HOM05D005241 ORTHO05D005862 9.1e-35 151.8 86 75.6
Nn8g41235 Nelumbo nucifera HOM05D005241 ORTHO05D005862 1.6e-31 141.0 79 75.9
AagrBONN_evm.TU.Sc2ySwM_228.5641 Anthoceros agrestis HOM05D005241 ORTHO05D005862 9.2e-27 125.2 311 29.6
FAN12G2859 Fragaria x ananassa HOM05D005241 ORTHO05D005862 1.2e-26 124.8 72 72.2
Sc08g0005370 Simmondsia chinensis HOM05D005241 ORTHO05D005862 7.8e-26 122.1 78 74.4
SHI03002 Sapria himalayana HOM05D005241 ORTHO05D005862 6.6e-25 119.0 314 29.6
MBI18_g29570_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 1.2e-23 114.8 91 59.3
Peaxi162Scf00014g00192 Petunia axillaris HOM05D005241 ORTHO05D005862 9.2e-19 98.6 90 60.0
CBR_g30152 Chara braunii HOM05D010403 ORTHO05D005862 2.0e-18 97.4 241 31.1
CBR_g30241 Chara braunii HOM05D005241 ORTHO05D005862 4.7e-15 86.3 309 26.9
Peaxi162Scf00013g00004 Petunia axillaris HOM05D000090 ORTHO05D001322 3.0e-09 67.0 41 63.4
MBI18_g11928_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 1.9e-08 64.3 47 68.1
MBI19_g36862_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 2.1e-07 60.8 44 59.1
Peaxi162Scf00609g00310 Petunia axillaris HOM05D004037 ORTHO05D019316 1.4e-06 58.2 43 65.1


User provided reference genes

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