Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO135G0648 Papaver somniferum HOM05D001555 ORTHO05D026749 4.2e-144 515.0 323 100.0
PSO724G0329 Papaver somniferum HOM05D001555 ORTHO05D026749 1.7e-116 423.3 329 86.9
MBI13_g01686_MAGBIO Magnolia biondii HOM05D001555 ORTHO05D026749 2.3e-41 173.7 287 45.3
Aqoxy7G04171 Aquilegia oxysepala HOM05D001555 ORTHO05D026749 5.1e-41 172.6 293 45.4
SEGI_19691 Sequoiadendron giganteum HOM05D001555 ORTHO05D001616 1.8e-17 94.4 307 32.6
TAR374G0688 Trochodendron aralioides HOM05D001414 ORTHO05D000619 1.9e-11 74.3 297 30.6
BcaB02g07014 Brassica carinata HOM05D001555 ORTHO05D001616 9.4e-11 72.0 336 28.3
Aqoxy5G04071 Aquilegia oxysepala HOM05D001555 ORTHO05D001616 1.6e-10 71.2 312 29.5
BcaNung06628 Brassica carinata HOM05D001555 ORTHO05D001616 1.6e-10 71.2 336 28.3
CiPaw.01G066000 Carya illinoinensis HOM05D001555 ORTHO05D001616 1.6e-10 71.2 298 30.2
GSVIVG01026960001 Vitis vinifera HOM05D001555 ORTHO05D001616 1.6e-10 71.2 305 29.8
Atru.chr5.555 Acer truncatum HOM05D001555 ORTHO05D001616 2.1e-10 70.9 291 29.9
Nn6g32428 Nelumbo nucifera HOM05D001555 ORTHO05D001616 2.7e-10 70.5 305 30.5
Actinidia18538 Actinidia chinensis HOM05D001555 ORTHO05D001616 3.6e-10 70.1 282 29.8
MSTRG.17296 Avicennia marina HOM05D001555 ORTHO05D001616 3.6e-10 70.1 301 30.6
FvH4_7g15170 Fragaria vesca HOM05D001555 ORTHO05D001616 3.6e-10 70.1 309 31.1
FAN01G1448 Fragaria x ananassa HOM05D001555 ORTHO05D001616 3.6e-10 70.1 309 31.1
FAN03G1316 Fragaria x ananassa HOM05D001555 ORTHO05D001616 3.6e-10 70.1 309 31.1
FAN06G2376 Fragaria x ananassa HOM05D001555 ORTHO05D001616 3.6e-10 70.1 309 31.1
FAN06G3909 Fragaria x ananassa HOM05D001555 ORTHO05D001616 3.6e-10 70.1 309 31.1
TWI36G0036 Tripterygium wilfordii HOM05D001555 ORTHO05D001616 3.6e-10 70.1 304 28.6
FAN10G0139 Fragaria x ananassa HOM05D001555 ORTHO05D001616 4.6e-10 69.7 309 31.1
FAN10G0166 Fragaria x ananassa HOM05D001555 ORTHO05D001616 4.6e-10 69.7 309 31.1
Hma1.2p1_0623F.1_g191030 Hydrangea macrophylla HOM05D001555 ORTHO05D001616 4.6e-10 69.7 306 30.4
Hma1.2p1_0623F.1_g191041 Hydrangea macrophylla HOM05D001555 ORTHO05D001616 4.6e-10 69.7 306 30.4
Nn1g01663 Nelumbo nucifera HOM05D001555 ORTHO05D001616 4.6e-10 69.7 304 29.6
vmacro20900 Vaccinium macrocarpon HOM05D001555 ORTHO05D001616 4.6e-10 69.7 311 28.3
BolC6t38399H Brassica oleracea HOM05D001555 ORTHO05D001616 7.9e-10 68.9 298 29.2
Peaxi162Scf00020g00138 Petunia axillaris HOM05D001555 ORTHO05D001616 7.9e-10 68.9 288 30.2
TWI56G0868 Tripterygium wilfordii HOM05D001555 ORTHO05D001616 7.9e-10 68.9 306 30.4
A07p29000 Brassica napus HOM05D001555 ORTHO05D001616 1.0e-09 68.6 298 29.2
C06p32770 Brassica napus HOM05D001555 ORTHO05D001616 1.0e-09 68.6 298 29.2
BraA07t30540Z Brassica rapa HOM05D001555 ORTHO05D001616 1.0e-09 68.6 298 29.2
CDE04G2292 Ceratophyllum demersum HOM05D001555 ORTHO05D001616 1.0e-09 68.6 299 30.8
RcHm_v2.0_Chr1g0357581 Rosa chinensis HOM05D001555 ORTHO05D001616 1.0e-09 68.6 311 30.2
ClCG05G001280 Citrullus lanatus HOM05D001555 ORTHO05D001616 1.4e-09 68.2 308 29.9
MD01G1070200 Malus domestica HOM05D001555 ORTHO05D001616 1.4e-09 68.2 307 28.7
Sc01g0003250 Simmondsia chinensis HOM05D001555 ORTHO05D001616 1.4e-09 68.2 290 29.7
CsaV3_3G008640 Cucumis sativus L. HOM05D001555 ORTHO05D001616 1.8e-09 67.8 308 29.9
unitig_60.g25623 Utricularia gibba HOM05D001555 ORTHO05D001616 1.8e-09 67.8 298 29.9
FAN20G1922 Fragaria x ananassa HOM05D001555 ORTHO05D001616 2.3e-09 67.4 293 30.4
Prupe.2G176400 Prunus persica HOM05D001555 ORTHO05D001616 2.3e-09 67.4 305 30.8
RcHm_v2.0_Chr6g0301001 Rosa chinensis HOM05D001555 ORTHO05D001616 2.3e-09 67.4 293 30.4
TAR375G0826 Trochodendron aralioides HOM05D001555 ORTHO05D001616 2.3e-09 67.4 308 28.9
Ciclev10001904m.g Citrus clementina HOM05D001555 ORTHO05D001616 3.9e-09 66.6 297 28.6
PSO478G2390 Papaver somniferum HOM05D001555 ORTHO05D001616 3.9e-09 66.6 302 28.5
AT1G75180 Arabidopsis thaliana HOM05D001555 ORTHO05D001616 5.1e-09 66.2 305 29.8
BcaB05g24887 Brassica carinata HOM05D001555 ORTHO05D001616 5.1e-09 66.2 285 31.9
Eucgr.F01567 Eucalyptus grandis HOM05D001555 ORTHO05D001616 5.1e-09 66.2 293 30.0
Gohir.D08G154000 Gossypium hirsutum HOM05D001555 ORTHO05D001616 5.1e-09 66.2 292 28.8
PSO782G2958 Papaver somniferum HOM05D001555 ORTHO05D001616 5.1e-09 66.2 302 28.5
Sed0001114 Sechium edule HOM05D001555 ORTHO05D001616 5.1e-09 66.2 288 33.3
Hund00269 Selenicereus undatus HOM05D001555 ORTHO05D001616 5.1e-09 66.2 303 30.4
Thecc.01G353200 Theobroma cacao HOM05D001555 ORTHO05D001616 5.1e-09 66.2 296 29.4
FAN15G0075 Fragaria x ananassa HOM05D001555 ORTHO05D001616 6.7e-09 65.9 293 30.7
Sed0006634 Sechium edule HOM05D001555 ORTHO05D001616 6.7e-09 65.9 298 28.9
Carub.0002s2199 Capsella rubella HOM05D001555 ORTHO05D001616 8.8e-09 65.5 336 27.7
MELO3C006084.2 Cucumis melo HOM05D001555 ORTHO05D001616 8.8e-09 65.5 308 29.9
BolC2t09263H Brassica oleracea HOM05D001555 ORTHO05D001616 1.1e-08 65.1 291 28.5
Ciclev10028884m.g Citrus clementina HOM05D001555 ORTHO05D001616 1.1e-08 65.1 294 31.0
SGA_v2.0_scaffold43G16388 Striga asiatica HOM05D001555 ORTHO05D001616 1.1e-08 65.1 304 29.9
Haze_15556 Corylus avellana HOM05D001555 ORTHO05D001616 1.5e-08 64.7 303 30.7
FvH4_2g39840 Fragaria vesca HOM05D001555 ORTHO05D001616 1.5e-08 64.7 292 29.8
QL04p055176 Quercus lobata HOM05D001555 ORTHO05D001616 1.5e-08 64.7 291 31.3
THA.LOC104798638 Tarenaya hassleriana HOM05D001555 ORTHO05D001616 1.5e-08 64.7 301 31.9
Gorai.004G159900 Gossypium raimondii HOM05D001555 ORTHO05D001616 1.9e-08 64.3 292 28.4
Oeu000773.1 Olea europaea HOM05D001555 ORTHO05D001616 1.9e-08 64.3 296 30.7
Oeu000774.1 Olea europaea HOM05D001555 ORTHO05D001616 1.9e-08 64.3 296 30.7
CSS0021057 Camellia sinensis var. sinensis HOM05D001555 ORTHO05D001616 2.5e-08 63.9 311 29.6
Cc02_g17580 Coffea canephora HOM05D001555 ORTHO05D001616 2.5e-08 63.9 301 29.2
Thhalv10018884m.g Eutrema salsugineum HOM05D001555 ORTHO05D001616 2.5e-08 63.9 338 27.8
Manes.05G159800 Manihot esculenta HOM05D001555 ORTHO05D001616 2.5e-08 63.9 300 28.3
Sp5g30330 Schrenkiella parvula HOM05D001555 ORTHO05D001616 2.5e-08 63.9 338 26.9
Sc14g0002080 Simmondsia chinensis HOM05D001555 ORTHO05D001616 2.5e-08 63.9 293 31.7
VMungo1127G1246 Vigna mungo HOM05D001555 ORTHO05D001616 2.5e-08 63.9 301 31.6
SEGI_01002 Sequoiadendron giganteum HOM05D001555 ORTHO05D009691 3.3e-08 63.5 231 26.8
AL2G35090 Arabidopsis lyrata HOM05D001555 ORTHO05D001616 4.3e-08 63.2 302 29.1
Cc10_g02910 Coffea canephora HOM05D001555 ORTHO05D001616 4.3e-08 63.2 303 31.0
Gohir.A05G194300 Gossypium hirsutum HOM05D001555 ORTHO05D001616 4.3e-08 63.2 295 30.5
HanXRQChr16g0521801 Helianthus annuus HOM05D001555 ORTHO05D001616 4.3e-08 63.2 298 27.9
Lj7C508G10 Lonicera japonica HOM05D001555 ORTHO05D001616 4.3e-08 63.2 310 29.0
TWI12G1279 Tripterygium wilfordii HOM05D001555 ORTHO05D001616 4.3e-08 63.2 299 29.8
TWI59G0388 Tripterygium wilfordii HOM05D004139 ORTHO05D004873 4.3e-08 63.2 300 28.7
Aqoxy6G01105 Aquilegia oxysepala HOM05D001555 ORTHO05D001616 5.7e-08 62.8 293 29.4
BolC8t51821H Brassica oleracea HOM05D001555 ORTHO05D001616 5.7e-08 62.8 295 27.5
FAN27G1850 Fragaria x ananassa HOM05D001555 ORTHO05D001616 5.7e-08 62.8 293 29.7
HanXRQChr03g0061161 Helianthus annuus HOM05D001555 ORTHO05D001616 5.7e-08 62.8 298 32.2
Zm00001eb059220 Zea mays HOM05D001555 ORTHO05D001616 5.7e-08 62.8 295 31.2
C08p42600 Brassica napus HOM05D001555 ORTHO05D001616 7.4e-08 62.4 295 27.5
Duzib138G1274 Durio zibethinus HOM05D004139 ORTHO05D004873 7.4e-08 62.4 294 28.2
ECA232G3268 Erigeron canadensis HOM05D001555 ORTHO05D001616 7.4e-08 62.4 295 29.8
Migut.N01464 Erythranthe guttata HOM05D001555 ORTHO05D001616 7.4e-08 62.4 304 28.6
PGR042G0054 Punica granatum HOM05D001555 ORTHO05D001616 7.4e-08 62.4 304 29.6
Sed0005709 Sechium edule HOM05D001555 ORTHO05D001616 7.4e-08 62.4 304 29.6
C02p32360 Brassica napus HOM05D001555 ORTHO05D001616 9.7e-08 62.0 291 29.2
MELO3C010938.2 Cucumis melo HOM05D001555 ORTHO05D001616 9.7e-08 62.0 289 29.4
ECA240G2473 Erigeron canadensis HOM05D004278 ORTHO05D005544 9.7e-08 62.0 290 32.8
Thhalv10008308m.g Eutrema salsugineum HOM05D001555 ORTHO05D001616 9.7e-08 62.0 294 29.6
SMO356G0264 Selaginella moellendorffii HOM05D001555 ORTHO05D001616 9.7e-08 62.0 315 27.9
CiPaw.05G064300 Carya illinoinensis HOM05D001555 ORTHO05D001616 1.3e-07 61.6 304 30.6
Ca_20874_v3 Cicer arietinum L. HOM05D001555 ORTHO05D001616 1.3e-07 61.6 288 31.6
THA.LOC104806944 Tarenaya hassleriana HOM05D001555 ORTHO05D001616 1.3e-07 61.6 295 32.5
COL.COLO4_26322 Corchorus olitorius HOM05D001555 ORTHO05D001616 1.7e-07 61.2 302 29.1
CsaV3_2G028650 Cucumis sativus L. HOM05D001555 ORTHO05D001616 1.7e-07 61.2 293 30.0
Dinv36078 Davidia involucrata HOM05D001555 ORTHO05D001616 1.7e-07 61.2 298 30.9
Gohir.D05G197500 Gossypium hirsutum HOM05D001555 ORTHO05D001616 1.7e-07 61.2 295 29.8
Gorai.009G202400 Gossypium raimondii HOM05D001555 ORTHO05D001616 1.7e-07 61.2 295 29.8
PGR031G0269 Punica granatum HOM05D004139 ORTHO05D004873 1.7e-07 61.2 290 30.0
Sp1g17300 Schrenkiella parvula HOM05D001555 ORTHO05D001616 1.7e-07 61.2 302 30.1
CARHR068510 Cardamine hirsuta HOM05D001555 ORTHO05D001616 2.2e-07 60.8 305 26.9
SGA_v2.0_scaffold11G05682 Striga asiatica HOM05D001555 ORTHO05D001616 2.2e-07 60.8 306 29.4
Aa31LG4G5380 Aethionema arabicum HOM05D001555 ORTHO05D001616 2.8e-07 60.5 315 27.6
Medtr4g070020 Medicago truncatula HOM05D001555 ORTHO05D001616 2.8e-07 60.5 306 30.4
Rhsim01G0165500 Rhododendron simsii HOM05D001555 ORTHO05D001616 2.8e-07 60.5 234 27.4
Rhsim11G0002600 Rhododendron simsii HOM05D001555 ORTHO05D001616 2.8e-07 60.5 234 27.4
C05p17820 Brassica napus HOM05D001555 ORTHO05D001616 3.7e-07 60.1 294 29.6
CSS0011140 Camellia sinensis var. sinensis HOM05D001555 ORTHO05D001616 3.7e-07 60.1 287 29.6
Glyma.12G043400 Glycine max HOM05D001555 ORTHO05D001616 3.7e-07 60.1 299 30.1
HanXRQChr09g0268891 Helianthus annuus HOM05D001555 ORTHO05D001616 3.7e-07 60.1 297 30.0
DCAR_008756 Daucus carota HOM05D001555 ORTHO05D001616 4.8e-07 59.7 301 29.9
Duzib052G1057 Durio zibethinus HOM05D001555 ORTHO05D001616 4.8e-07 59.7 300 31.3
MBI16_g31220_MAGBIO Magnolia biondii HOM05D001555 ORTHO05D001616 4.8e-07 59.7 298 29.5
Pp3c1_15940 Physcomitrium patens HOM05D001555 ORTHO05D001616 4.8e-07 59.7 304 26.3
A07p40770 Brassica napus HOM05D001555 ORTHO05D001616 6.3e-07 59.3 294 29.3
BolC5t30487H Brassica oleracea HOM05D001555 ORTHO05D001616 6.3e-07 59.3 296 29.1
BraA07t31619Z Brassica rapa HOM05D001555 ORTHO05D001616 6.3e-07 59.3 294 29.3
CDE12G0908 Ceratophyllum demersum HOM05D001555 ORTHO05D001616 6.3e-07 59.3 301 29.2
Dinv32516 Davidia involucrata HOM05D001555 ORTHO05D001616 6.3e-07 59.3 298 28.9
Glyma.11G118000 Glycine max HOM05D001555 ORTHO05D001616 6.3e-07 59.3 299 30.8
Lalb_Chr01g0002561 Lupinus albus HOM05D001555 ORTHO05D001616 6.3e-07 59.3 295 29.5
Lalb_Chr19g0138631 Lupinus albus HOM05D001555 ORTHO05D001616 6.3e-07 59.3 295 28.1
Potri.014G089600 Populus trichocarpa HOM05D001555 ORTHO05D001616 6.3e-07 59.3 294 29.3
BraA09t41316Z Brassica rapa HOM05D001555 ORTHO05D001616 8.2e-07 58.9 292 26.7
CARHR019990 Cardamine hirsuta HOM05D001555 ORTHO05D001616 8.2e-07 58.9 305 29.2
Duzib093G1024 Durio zibethinus HOM05D001555 ORTHO05D001616 8.2e-07 58.9 313 28.1
Eucgr.D02322 Eucalyptus grandis HOM05D001555 ORTHO05D001616 8.2e-07 58.9 314 28.7
Hma1.2p1_0066F.1_g036430 Hydrangea macrophylla HOM05D001555 ORTHO05D001616 8.2e-07 58.9 291 30.2
Lsat_1_v5_gn_1_17701 Lactuca sativa HOM05D001555 ORTHO05D001616 8.2e-07 58.9 291 29.2
Prupe.1G379700 Prunus persica HOM05D001555 ORTHO05D001616 8.2e-07 58.9 293 30.0
Ah.01g019400 Amaranthus hybridus HOM05D001555 ORTHO05D001616 1.1e-06 58.5 297 30.3
Ciclev10021379m.g Citrus clementina HOM05D001555 ORTHO05D001616 1.1e-06 58.5 304 28.9
Sabra02G0198800 Salix brachista HOM05D001555 ORTHO05D001616 1.1e-06 58.5 297 30.0
Sc02g0006130 Simmondsia chinensis HOM05D001555 ORTHO05D001616 1.1e-06 58.5 299 30.1
AT1G19400 Arabidopsis thaliana HOM05D001555 ORTHO05D001616 1.4e-06 58.2 290 30.7
ECA232G0314 Erigeron canadensis HOM05D001555 ORTHO05D001616 1.4e-06 58.2 299 29.8
Lj3g0022860 Lotus japonicus HOM05D001555 ORTHO05D001616 1.4e-06 58.2 287 30.7
Mapoly0200s0005 Marchantia polymorpha HOM05D001555 ORTHO05D001616 1.4e-06 58.2 303 28.7
Pp3c10_16330 Physcomitrium patens HOM05D001555 ORTHO05D001616 1.4e-06 58.2 300 26.7
C06p49160 Brassica napus HOM05D001555 ORTHO05D001616 1.8e-06 57.8 264 31.1
Lsat_1_v5_gn_9_109621 Lactuca sativa HOM05D001555 ORTHO05D001616 1.8e-06 57.8 295 31.5
QL11p043655 Quercus lobata HOM05D001555 ORTHO05D001616 1.8e-06 57.8 289 31.1
HPP92_012918 Vanilla planifolia HOM05D001555 ORTHO05D001616 1.8e-06 57.8 310 28.4
Gohir.A08G132600 Gossypium hirsutum HOM05D001555 ORTHO05D001616 2.4e-06 57.4 248 29.8
PSO541G5052 Papaver somniferum HOM05D001555 ORTHO05D001616 2.4e-06 57.4 289 30.8
TPR.G20166 Trifolium pratense HOM05D001555 ORTHO05D001616 2.4e-06 57.4 307 28.0
Glyma.17G250200 Glycine max HOM05D001555 ORTHO05D001616 3.1e-06 57.0 303 29.4
Hma1.2p1_0627F.1_g191650 Hydrangea macrophylla HOM05D001555 ORTHO05D001616 3.1e-06 57.0 309 26.2
Manes.17G100900 Manihot esculenta HOM05D001555 ORTHO05D001616 3.1e-06 57.0 301 30.6
Thecc.02G085500 Theobroma cacao HOM05D001555 ORTHO05D001616 3.1e-06 57.0 297 29.3
AL1G32020 Arabidopsis lyrata HOM05D001555 ORTHO05D001616 4.1e-06 56.6 284 30.6
A09p59340 Brassica napus HOM05D001555 ORTHO05D001616 4.1e-06 56.6 300 29.3
BolC6t39949H Brassica oleracea HOM05D001555 ORTHO05D001616 4.1e-06 56.6 297 29.3
Potri.002G260900 Populus trichocarpa HOM05D001555 ORTHO05D001616 4.1e-06 56.6 294 30.3
Hund06232 Selenicereus undatus HOM05D001555 ORTHO05D001616 4.1e-06 56.6 314 29.3
CANSAT25G0359 Cannabis sativa HOM05D001555 ORTHO05D001616 5.3e-06 56.2 297 29.3
CiPaw.15G077900 Carya illinoinensis HOM05D001555 ORTHO05D001616 5.3e-06 56.2 297 29.6
DCAR_003675 Daucus carota HOM05D001555 ORTHO05D001616 5.3e-06 56.2 307 30.3
ECA247G3317 Erigeron canadensis HOM05D001555 ORTHO05D001616 5.3e-06 56.2 294 28.9
Gohir.D13G032800 Gossypium hirsutum HOM05D001555 ORTHO05D001616 5.3e-06 56.2 292 30.5
Gorai.013G037200 Gossypium raimondii HOM05D001555 ORTHO05D001616 5.3e-06 56.2 292 30.5
HanXRQChr02g0042101 Helianthus annuus HOM05D001555 ORTHO05D001616 5.3e-06 56.2 294 29.6
Peaxi162Scf00016g00824 Petunia axillaris HOM05D001555 ORTHO05D001616 5.3e-06 56.2 294 31.0
Potri.002G163300 Populus trichocarpa HOM05D001555 ORTHO05D001616 5.3e-06 56.2 301 27.2
Thecc.08G026300 Theobroma cacao HOM05D001555 ORTHO05D001616 5.3e-06 56.2 297 29.0
TAR376G0116 Trochodendron aralioides HOM05D001555 ORTHO05D001616 5.3e-06 56.2 295 30.2
Actinidia15327 Actinidia chinensis HOM05D001555 ORTHO05D001616 6.9e-06 55.8 294 29.3
Aa31LG7G4120 Aethionema arabicum HOM05D001555 ORTHO05D001616 6.9e-06 55.8 280 28.9
FAN20G2300 Fragaria x ananassa HOM05D001555 ORTHO05D001616 6.9e-06 55.8 292 29.8
Sopen12g031010 Solanum pennellii HOM05D001555 ORTHO05D001616 6.9e-06 55.8 302 30.5
PGSC0003DMG400015456 Solanum tuberosum HOM05D001555 ORTHO05D001616 6.9e-06 55.8 294 29.9
THA.LOC104801393 Tarenaya hassleriana HOM05D001555 ORTHO05D001616 6.9e-06 55.8 292 25.7
BraA02t07011Z Brassica rapa HOM05D001555 ORTHO05D001616 9.1e-06 55.5 294 29.6
Carub.0001s0074 Capsella rubella HOM05D001555 ORTHO05D001616 9.1e-06 55.5 331 26.6
FAN15G3725 Fragaria x ananassa HOM05D001555 ORTHO05D001616 9.1e-06 55.5 299 28.1
Gohir.A13G034400 Gossypium hirsutum HOM05D001555 ORTHO05D001616 9.1e-06 55.5 292 30.5
MBI04_g15072_MAGBIO Magnolia biondii HOM05D001555 ORTHO05D001616 9.1e-06 55.5 313 29.4
Nitab4.5_0000308g0070 Nicotiana tabacum HOM05D001555 ORTHO05D001616 9.1e-06 55.5 293 28.7


User provided reference genes

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