Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO135G0624 Papaver somniferum HOM05D015499 ORTHO05D001261 1.2e-103 379.8 188 100.0
PSO384G3289 Papaver somniferum HOM05D015499 ORTHO05D001261 9.7e-85 317.0 190 82.6
PSO384G4665 Papaver somniferum HOM05D015499 ORTHO05D001261 4.8e-84 314.7 190 82.6
PSO384G0909 Papaver somniferum HOM05D015499 ORTHO05D001261 8.2e-84 313.9 190 82.6
PSO384G0456 Papaver somniferum HOM05D015499 ORTHO05D001261 1.1e-83 313.5 190 82.1
PSO384G0790 Papaver somniferum HOM05D015499 ORTHO05D001261 1.1e-83 313.5 190 82.1
PSO384G5126 Papaver somniferum HOM05D015499 ORTHO05D001261 1.8e-83 312.8 190 81.1
PSO384G1340 Papaver somniferum HOM05D015499 ORTHO05D001261 5.8e-37 158.3 185 44.9
PSO384G4694 Papaver somniferum HOM05D015499 ORTHO05D001261 2.9e-36 156.0 185 43.2
PSO170G1696 Papaver somniferum HOM05D001445 ORTHO05D001261 1.9e-19 100.1 175 34.3
PSO541G5291 Papaver somniferum HOM05D001445 ORTHO05D001261 1.9e-19 100.1 182 34.6
PSO541G5973 Papaver somniferum HOM05D001445 ORTHO05D001261 5.4e-19 98.6 182 35.2
TAR375G1152 Trochodendron aralioides HOM05D001445 ORTHO05D001261 9.3e-19 97.8 178 36.0
PSO026G0001 Papaver somniferum HOM05D001445 ORTHO05D001261 3.5e-18 95.9 182 34.1
PSO782G4884 Papaver somniferum HOM05D001445 ORTHO05D001261 4.6e-18 95.5 180 35.6
PSO478G4988 Papaver somniferum HOM05D001445 ORTHO05D001261 7.8e-18 94.7 179 35.8
PSO782G5274 Papaver somniferum HOM05D001445 ORTHO05D001261 7.8e-18 94.7 174 34.5
PSO081G0031 Papaver somniferum HOM05D001445 ORTHO05D001261 3.0e-17 92.8 176 31.8
PSO081G0157 Papaver somniferum HOM05D001445 ORTHO05D001261 5.1e-17 92.0 176 31.8
PSO081G0174 Papaver somniferum HOM05D001445 ORTHO05D001261 5.1e-17 92.0 176 31.8
TAR375G0630 Trochodendron aralioides HOM05D001445 ORTHO05D001261 8.7e-17 91.3 176 34.7
TAR073G0001 Trochodendron aralioides HOM05D001445 ORTHO05D001261 1.1e-16 90.9 177 35.0
PSO081G0055 Papaver somniferum HOM05D001445 ORTHO05D001261 1.9e-16 90.1 176 31.2
PSO782G4131 Papaver somniferum HOM05D001445 ORTHO05D001261 5.6e-16 88.6 178 36.0
Prupe.5G048900 Prunus persica HOM05D001445 ORTHO05D001261 7.3e-16 88.2 164 32.9
PSO478G2336 Papaver somniferum HOM05D001445 ORTHO05D001261 1.3e-15 87.4 179 34.6
Nn1g00664 Nelumbo nucifera HOM05D001445 ORTHO05D001261 3.6e-15 85.9 156 32.7
TAR629G3049 Trochodendron aralioides HOM05D001445 ORTHO05D001261 6.2e-15 85.1 152 32.2
Nn1g02148 Nelumbo nucifera HOM05D001445 ORTHO05D001261 2.4e-14 83.2 156 32.1
Duzib205G0415 Durio zibethinus HOM05D001445 ORTHO05D001261 9.0e-14 81.3 143 32.9
Duzib084G0977 Durio zibethinus HOM05D001445 ORTHO05D001261 1.2e-13 80.9 154 33.8
Dinv28905 Davidia involucrata HOM05D001445 ORTHO05D001261 1.5e-13 80.5 137 32.8
PSO384G1724 Papaver somniferum HOM05D001445 ORTHO05D001261 2.0e-13 80.1 163 34.4
PSO573G0039 Papaver somniferum HOM05D001445 ORTHO05D001261 7.6e-13 78.2 165 33.9
PSO775G0001 Papaver somniferum HOM05D001445 ORTHO05D001261 7.6e-13 78.2 165 33.9
PSO081G0057 Papaver somniferum HOM05D001445 ORTHO05D001261 1.3e-12 77.4 177 29.4
Gohir.D03G169433 Gossypium hirsutum HOM05D001445 ORTHO05D001261 1.7e-12 77.0 152 32.9
Gorai.003G179700 Gossypium raimondii HOM05D001445 ORTHO05D001261 1.7e-12 77.0 152 32.9
Nn1g00650 Nelumbo nucifera HOM05D001445 ORTHO05D001261 3.8e-12 75.9 180 27.8
TAR375G0055 Trochodendron aralioides HOM05D001445 ORTHO05D001261 3.8e-12 75.9 176 30.7
MD02G1225200 Malus domestica HOM05D001445 ORTHO05D001261 4.9e-12 75.5 165 28.5
PSO573G0024 Papaver somniferum HOM05D001445 ORTHO05D001261 4.9e-12 75.5 142 28.2
PSO017G6871 Papaver somniferum HOM05D001445 ORTHO05D001261 6.4e-12 75.1 169 29.0
Thhalv10001100m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 8.4e-12 74.7 174 29.3
Sc07g0008940 Simmondsia chinensis HOM05D001445 ORTHO05D001261 8.4e-12 74.7 176 29.5
Ciclev10023652m.g Citrus clementina HOM05D001445 ORTHO05D001261 1.1e-11 74.3 176 28.4
Sp2g11740 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.4e-11 73.9 177 29.9
MD06G1042400 Malus domestica HOM05D001445 ORTHO05D001261 1.9e-11 73.6 183 31.1
Sp2g11730 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.9e-11 73.6 172 29.1
Ciclev10033644m.g Citrus clementina HOM05D001445 ORTHO05D001261 2.4e-11 73.2 175 28.6
Eucgr.D01174 Eucalyptus grandis HOM05D001445 ORTHO05D001261 3.2e-11 72.8 164 29.9
PSO675G4879 Papaver somniferum HOM05D001445 ORTHO05D001261 3.2e-11 72.8 179 27.9
Eucgr.D01181 Eucalyptus grandis HOM05D001445 ORTHO05D001261 4.2e-11 72.4 169 32.0
Eucgr.L02459 Eucalyptus grandis HOM05D001445 ORTHO05D001261 4.2e-11 72.4 169 32.5
Thhalv10001105m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 4.2e-11 72.4 176 29.0
RcHm_v2.0_Chr7g0207991 Rosa chinensis HOM05D001445 ORTHO05D001261 5.4e-11 72.0 166 31.3
Eucgr.D01180 Eucalyptus grandis HOM05D001445 ORTHO05D001261 7.1e-11 71.6 169 31.4
Thhalv10001199m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 7.1e-11 71.6 176 29.0
MD07G1088700 Malus domestica HOM05D001445 ORTHO05D001261 7.1e-11 71.6 170 27.6
Sc07g0008930 Simmondsia chinensis HOM05D001445 ORTHO05D001261 7.1e-11 71.6 151 31.1
COL.COLO4_17127 Corchorus olitorius HOM05D001445 ORTHO05D001261 1.6e-10 70.5 174 32.8
Thecc.03G235500 Theobroma cacao HOM05D001445 ORTHO05D001261 1.6e-10 70.5 143 32.2
BcaC03g16912 Brassica carinata HOM05D001445 ORTHO05D001261 2.1e-10 70.1 176 28.4
C02p48140 Brassica napus HOM05D001445 ORTHO05D001261 2.1e-10 70.1 176 28.4
A02p30180 Brassica napus HOM05D001445 ORTHO05D001261 2.7e-10 69.7 176 29.0
COL.COLO4_12351 Corchorus olitorius HOM05D001445 ORTHO05D001261 3.5e-10 69.3 173 29.5
PSO017G7346 Papaver somniferum HOM05D001445 ORTHO05D001261 3.5e-10 69.3 180 26.7
BolC2t10846H Brassica oleracea HOM05D001445 ORTHO05D001261 4.6e-10 68.9 176 27.8
Aa31LG9G5990 Aethionema arabicum HOM05D001445 ORTHO05D001261 6.0e-10 68.6 170 28.2
Aa31sc241G40 Aethionema arabicum HOM05D001445 ORTHO05D001261 7.9e-10 68.2 176 28.4
COL.COLO4_17126 Corchorus olitorius HOM05D001445 ORTHO05D001261 7.9e-10 68.2 172 30.2
Eucgr.D01179 Eucalyptus grandis HOM05D001445 ORTHO05D001261 7.9e-10 68.2 169 30.8
RcHm_v2.0_Chr7g0208771 Rosa chinensis HOM05D001445 ORTHO05D001261 7.9e-10 68.2 156 32.1
MSTRG.4961 Avicennia marina HOM05D001445 ORTHO05D001261 1.0e-09 67.8 169 27.8
Aa31sc241G60 Aethionema arabicum HOM05D001445 ORTHO05D001261 1.3e-09 67.4 176 27.8
BolC3t18500H Brassica oleracea HOM05D001445 ORTHO05D001261 1.3e-09 67.4 153 28.8
Duzib133G0634 Durio zibethinus HOM05D001445 ORTHO05D001261 1.3e-09 67.4 186 29.0
BcaB07g30808 Brassica carinata HOM05D001445 ORTHO05D001261 1.8e-09 67.0 176 28.4
Glyma.17G151200 Glycine max HOM05D001445 ORTHO05D001261 1.8e-09 67.0 180 30.0
BraA02t08034Z Brassica rapa HOM05D001445 ORTHO05D001261 2.3e-09 66.6 176 27.8
Sc07g0008920 Simmondsia chinensis HOM05D001445 ORTHO05D001261 2.3e-09 66.6 141 31.2
TWI15G1112 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 2.3e-09 66.6 152 31.6
Thecc.01G402600 Theobroma cacao HOM05D001445 ORTHO05D001261 3.0e-09 66.2 175 30.3
BcaC03g16913 Brassica carinata HOM05D001445 ORTHO05D001261 3.9e-09 65.9 153 28.1
C02p48090 Brassica napus HOM05D001445 ORTHO05D001261 3.9e-09 65.9 174 27.0
C02p48150 Brassica napus HOM05D001445 ORTHO05D001261 3.9e-09 65.9 153 28.1
BolC2t10840H Brassica oleracea HOM05D001445 ORTHO05D001261 3.9e-09 65.9 174 27.0
BolC2t10847H Brassica oleracea HOM05D001445 ORTHO05D001261 3.9e-09 65.9 153 28.1
Haze_02903 Corylus avellana HOM05D001445 ORTHO05D001261 3.9e-09 65.9 162 27.8
PSO081G0137 Papaver somniferum HOM05D001445 ORTHO05D001261 3.9e-09 65.9 144 28.5
Carub.0008s0089 Capsella rubella HOM05D001445 ORTHO05D001261 5.1e-09 65.5 174 25.9
MELO3C017187.2 Cucumis melo HOM05D001445 ORTHO05D001261 5.1e-09 65.5 178 23.0
Potri.003G086500 Populus trichocarpa HOM05D001445 ORTHO05D001261 5.1e-09 65.5 168 28.6
TAR629G2132 Trochodendron aralioides HOM05D001445 ORTHO05D001261 5.1e-09 65.5 181 30.4
Potri.014G044100 Populus trichocarpa HOM05D001445 ORTHO05D001261 6.7e-09 65.1 177 26.0
RcHm_v2.0_Chr1g0344031 Rosa chinensis HOM05D001445 ORTHO05D001261 6.7e-09 65.1 176 23.9
A02p30560 Brassica napus HOM05D001445 ORTHO05D001261 8.7e-09 64.7 153 28.1
A02p30500 Brassica napus HOM05D001445 ORTHO05D001261 1.1e-08 64.3 174 27.0
BraA02t08068Z Brassica rapa HOM05D001445 ORTHO05D001261 1.1e-08 64.3 174 27.0
Prupe.5G048600 Prunus persica HOM05D001445 ORTHO05D001261 1.1e-08 64.3 170 25.9
AL8G11310 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 1.5e-08 63.9 174 27.0
Cfa011022 Carpinus fangiana HOM05D001445 ORTHO05D001261 1.5e-08 63.9 168 28.6
Manes.15G171900 Manihot esculenta HOM05D001445 ORTHO05D001261 1.9e-08 63.5 137 30.7
AL8G11320 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 2.5e-08 63.2 172 27.9
A02p30590 Brassica napus HOM05D001445 ORTHO05D001261 2.5e-08 63.2 176 26.1
Nn1g00654 Nelumbo nucifera HOM05D001445 ORTHO05D001261 2.5e-08 63.2 156 28.2
Sp2g11720 Schrenkiella parvula HOM05D001445 ORTHO05D001261 2.5e-08 63.2 174 25.9
AT5G46930 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 3.3e-08 62.8 178 27.0
CsaV3_1G002510 Cucumis sativus L. HOM05D001445 ORTHO05D001261 3.3e-08 62.8 150 25.3
AT5G46970 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 4.3e-08 62.4 143 29.4
C07p30520 Brassica napus HOM05D001445 ORTHO05D001261 4.3e-08 62.4 168 28.0
BolC7t43593H Brassica oleracea HOM05D001445 ORTHO05D001261 4.3e-08 62.4 168 28.0
MD06G1041900 Malus domestica HOM05D001445 ORTHO05D001261 4.3e-08 62.4 153 28.1
QL04p026153 Quercus lobata HOM05D001445 ORTHO05D001261 4.3e-08 62.4 183 25.7
CARHR174480 Cardamine hirsuta HOM05D001445 ORTHO05D001261 7.4e-08 61.6 146 26.7
TWI14G0207 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 7.4e-08 61.6 155 24.5
TAR375G0246 Trochodendron aralioides HOM05D001445 ORTHO05D001261 7.4e-08 61.6 169 27.2
BcaC01g02648 Brassica carinata HOM05D001445 ORTHO05D001261 9.6e-08 61.2 153 29.4
Sabra14G0032000 Salix brachista HOM05D001445 ORTHO05D001261 9.6e-08 61.2 166 27.1
BcaC06g31431 Brassica carinata HOM05D001445 ORTHO05D001261 1.6e-07 60.5 180 26.1
BcaC06g34307 Brassica carinata HOM05D001445 ORTHO05D001261 1.6e-07 60.5 168 27.4
A02p30580 Brassica napus HOM05D001445 ORTHO05D001261 1.6e-07 60.5 178 27.5
A06p45450 Brassica napus HOM05D001445 ORTHO05D001261 1.6e-07 60.5 169 26.6
CARHR174500 Cardamine hirsuta HOM05D001445 ORTHO05D001261 1.6e-07 60.5 153 28.1
AL8G11340 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 2.1e-07 60.1 174 26.4
BraA02t08073Z Brassica rapa HOM05D001445 ORTHO05D001261 2.8e-07 59.7 155 28.4
BcaC03g16906 Brassica carinata HOM05D001445 ORTHO05D001261 6.2e-07 58.5 155 27.1
BraA02t08076Z Brassica rapa HOM05D001445 ORTHO05D001261 6.2e-07 58.5 178 27.5
BraA02t08078Z Brassica rapa HOM05D001445 ORTHO05D001261 6.2e-07 58.5 153 27.5
BraA06t27413Z Brassica rapa HOM05D001445 ORTHO05D001261 6.2e-07 58.5 169 26.0
Aqoxy2G03061 Aquilegia oxysepala HOM05D001445 ORTHO05D001261 8.1e-07 58.2 182 26.9
Aqoxy5G00072 Aquilegia oxysepala HOM05D001445 ORTHO05D001261 8.1e-07 58.2 183 26.8
CARHR174490 Cardamine hirsuta HOM05D001445 ORTHO05D001261 1.1e-06 57.8 147 27.9
Thecc.03G235400 Theobroma cacao HOM05D001445 ORTHO05D001261 1.1e-06 57.8 141 27.7
Hma1.2p1_0311F.1_g121180 Hydrangea macrophylla HOM05D001445 ORTHO05D001261 1.4e-06 57.4 163 25.2
Sed0025391 Sechium edule HOM05D001445 ORTHO05D001261 2.4e-06 56.6 177 24.9
Cpa.g.sc29.3 Carica papaya HOM05D001445 ORTHO05D001261 4.0e-06 55.8 165 24.8
Aqoxy5G03639 Aquilegia oxysepala HOM05D001445 ORTHO05D001261 6.9e-06 55.1 144 26.4
Duzib205G1605 Durio zibethinus HOM05D001445 ORTHO05D001261 6.9e-06 55.1 123 30.1
FvH4_5g21030 Fragaria vesca HOM05D001445 ORTHO05D001261 9.0e-06 54.7 168 29.2
HPP92_004344 Vanilla planifolia HOM05D014663 ORTHO05D001261 9.0e-06 54.7 153 28.1


User provided reference genes

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