Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 1.1e-127 459.9 231 100.0
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 9.7e-127 456.8 231 98.7
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 1.1e-106 390.2 238 82.8
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 1.4e-106 389.8 232 81.5
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 1.9e-106 389.4 224 84.4
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 1.9e-106 389.4 227 85.9
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 3.2e-106 388.7 232 82.3
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 3.2e-106 388.7 236 80.9
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 5.5e-106 387.9 234 82.5
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 7.2e-106 387.5 234 81.6
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 7.2e-106 387.5 232 83.6
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 9.4e-106 387.1 229 83.8
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 1.2e-105 386.7 232 81.9
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.2e-105 386.7 233 80.3
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 2.1e-105 386.0 232 81.5
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 2.1e-105 386.0 233 80.3
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 2.1e-105 386.0 233 80.3
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 2.7e-105 385.6 238 80.3
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 6.1e-105 384.4 233 79.4
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 6.1e-105 384.4 233 79.8
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 6.1e-105 384.4 233 79.8
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 8.0e-105 384.0 233 81.5
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 8.0e-105 384.0 224 83.5
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 8.0e-105 384.0 236 80.9
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 1.0e-104 383.6 231 81.4
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 1.0e-104 383.6 234 81.6
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 3.0e-104 382.1 232 81.5
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 3.9e-104 381.7 233 81.1
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 6.7e-104 380.9 234 81.2
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 6.7e-104 380.9 231 81.0
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 6.7e-104 380.9 234 79.5
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 6.7e-104 380.9 231 79.2
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 6.7e-104 380.9 224 81.2
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 8.8e-104 380.6 235 80.9
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 2.0e-103 379.4 229 80.3
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 2.0e-103 379.4 233 81.5
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 4.4e-103 378.3 233 78.5
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 5.7e-103 377.9 237 78.5
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 9.7e-103 377.1 231 80.5
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 1.3e-102 376.7 233 79.8
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 2.2e-102 375.9 240 76.7
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 2.8e-102 375.6 224 81.2
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 3.7e-102 375.2 236 78.8
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 6.3e-102 374.4 224 80.8
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 6.3e-102 374.4 231 78.8
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 1.1e-101 373.6 235 77.9
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 1.4e-101 373.2 232 78.4
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 1.4e-101 373.2 231 80.1
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 1.8e-101 372.9 224 80.8
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 2.4e-101 372.5 229 79.5
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 4.1e-101 371.7 231 78.8
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 5.3e-101 371.3 221 81.0
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 7.0e-101 370.9 221 81.9
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 9.1e-101 370.5 238 77.7
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 1.6e-100 369.8 224 79.0
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 2.0e-100 369.4 231 79.2
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 2.6e-100 369.0 231 78.8
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 2.6e-100 369.0 233 77.3
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 4.5e-100 368.2 234 80.3
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 4.5e-100 368.2 233 77.3
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 4.5e-100 368.2 224 78.1
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 4.5e-100 368.2 224 78.1
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 7.7e-100 367.5 226 78.8
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 1.0e-99 367.1 226 78.3
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 1.0e-99 367.1 226 78.3
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 1.3e-99 366.7 223 80.3
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 1.7e-99 366.3 226 78.8
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 2.2e-99 365.9 233 76.8
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 2.9e-99 365.5 227 78.4
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 2.9e-99 365.5 236 77.1
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 5.0e-99 364.8 231 75.3
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 6.5e-99 364.4 220 80.0
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 8.5e-99 364.0 246 75.2
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 1.1e-98 363.6 232 78.9
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 1.9e-98 362.8 226 79.2
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 4.2e-98 361.7 237 78.1
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 5.5e-98 361.3 223 78.5
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 7.2e-98 360.9 230 75.2
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 7.2e-98 360.9 232 75.9
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 2.1e-97 359.4 238 74.8
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 4.7e-97 358.2 232 75.4
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 6.1e-97 357.8 220 78.6
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 1.0e-96 357.1 232 74.1
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 1.0e-96 357.1 232 74.1
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 1.0e-96 357.1 239 72.4
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 1.4e-96 356.7 232 75.4
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 1.4e-96 356.7 233 74.7
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 1.8e-96 356.3 231 76.6
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 4.0e-96 355.1 233 74.7
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 8.8e-96 354.0 232 72.8
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 1.5e-95 353.2 232 76.7
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 2.6e-95 352.4 227 74.4
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 3.3e-95 352.1 232 74.1
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 3.3e-95 352.1 232 74.6
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 3.3e-95 352.1 226 75.7
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 3.3e-95 352.1 226 74.8
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 7.5e-95 350.9 226 75.2
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 7.5e-95 350.9 219 79.0
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 1.3e-94 350.1 232 72.0
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 3.7e-94 348.6 233 73.0
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 5.3e-93 344.7 222 74.3
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 2.0e-92 342.8 233 76.0
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 4.5e-92 341.7 232 73.3
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 5.9e-92 341.3 252 67.9
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 1.3e-91 340.1 224 73.2
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 1.1e-90 337.0 240 72.1
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 1.5e-90 336.7 304 59.5
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 6.1e-89 331.3 232 71.6
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 1.8e-88 329.7 232 73.7
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 1.5e-87 326.6 187 85.6
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 3.4e-87 325.5 318 56.6
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 1.3e-86 323.6 229 68.1
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 1.7e-86 323.2 223 67.3
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 1.6e-84 316.6 231 68.4
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 1.0e-83 313.9 232 67.2
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 1.3e-83 313.5 232 67.2
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 8.6e-83 310.8 192 78.1
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 9.5e-82 307.4 187 78.1
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 1.6e-81 306.6 217 65.9
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 4.7e-81 305.1 198 76.3
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 6.1e-81 304.7 217 64.5
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 1.8e-80 303.1 189 77.2
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 1.8e-80 303.1 218 65.1
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 2.2e-78 296.2 237 66.2
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 1.6e-68 263.5 168 76.2
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 3.5e-68 262.3 197 65.5
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 1.3e-67 260.4 154 84.4
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 2.1e-65 253.1 223 59.2
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 1.1e-56 224.2 150 69.3
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 2.6e-55 219.5 219 51.6
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 3.1e-40 169.5 119 65.5
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 6.4e-38 161.8 105 78.1
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 1.2e-36 157.5 190 39.5
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 1.6e-28 130.6 104 67.3
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 8.1e-25 118.2 205 34.1
ATR0705G105 Amborella trichopoda HOM05D005951 ORTHO05D007025 6.9e-08 62.0 72 41.7
Ah.14g084710 Amaranthus hybridus HOM05D005951 ORTHO05D007025 6.5e-06 55.5 39 69.2


User provided reference genes

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