Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 2.8e-202 708.4 355 100.0
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 2.6e-195 685.3 358 96.6
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 3.5e-144 515.4 355 71.0
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 4.6e-144 515.0 355 71.3
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 7.8e-144 514.2 356 72.2
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 5.1e-143 511.5 358 70.4
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 5.1e-143 511.5 355 69.9
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 8.7e-143 510.8 356 71.6
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 8.7e-143 510.8 355 69.6
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 1.9e-142 509.6 355 69.9
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 1.9e-142 509.6 355 70.7
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 2.5e-142 509.2 355 70.7
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 2.5e-142 509.2 355 70.4
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 3.3e-142 508.8 355 69.3
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 4.3e-142 508.4 355 70.1
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 5.6e-142 508.1 355 69.6
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 7.3e-142 507.7 355 69.6
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 7.3e-142 507.7 357 70.6
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 7.3e-142 507.7 355 69.9
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 7.3e-142 507.7 355 69.9
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 9.6e-142 507.3 355 68.5
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 3.6e-141 505.4 355 69.6
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 4.7e-141 505.0 363 69.1
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 1.8e-140 503.1 355 69.9
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.8e-140 503.1 355 69.3
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 4.0e-140 501.9 355 69.9
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 5.3e-140 501.5 359 69.6
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 9.0e-140 500.7 358 70.1
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 9.0e-140 500.7 359 69.1
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 1.2e-139 500.4 361 68.7
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 2.0e-139 499.6 355 67.9
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 3.4e-139 498.8 362 68.8
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 3.4e-139 498.8 355 67.9
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 3.4e-139 498.8 357 69.2
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 7.6e-139 497.7 357 68.9
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 7.6e-139 497.7 355 67.0
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 7.6e-139 497.7 357 67.5
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 2.2e-138 496.1 355 66.5
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.1e-137 493.8 355 67.9
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.4e-137 493.4 356 68.0
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 4.2e-137 491.9 355 67.9
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 4.2e-137 491.9 356 67.7
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 7.1e-137 491.1 355 67.6
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 9.3e-137 490.7 362 67.4
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.6e-136 490.0 355 67.3
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 2.1e-136 489.6 362 66.6
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 2.7e-136 489.2 355 67.0
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.0e-135 487.3 357 66.4
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 1.3e-135 486.9 355 65.9
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 2.3e-135 486.1 355 67.6
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 2.3e-135 486.1 355 67.0
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.0e-135 485.7 357 66.4
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 3.0e-135 485.7 355 65.9
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 5.1e-135 485.0 355 65.9
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 6.6e-135 484.6 355 67.6
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 8.7e-135 484.2 355 65.9
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 1.1e-134 483.8 357 66.9
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 1.1e-134 483.8 355 66.8
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 1.5e-134 483.4 358 66.2
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 2.5e-134 482.6 355 66.8
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 4.3e-134 481.9 355 67.0
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 5.6e-134 481.5 356 67.4
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 1.3e-133 480.3 363 66.1
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 1.6e-133 479.9 355 63.9
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 1.6e-133 479.9 355 67.3
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 2.1e-133 479.6 363 65.0
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 2.1e-133 479.6 355 66.5
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 2.8e-133 479.2 362 65.7
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 2.8e-133 479.2 356 65.7
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.6e-133 478.8 360 64.7
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 4.8e-133 478.4 355 65.1
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 1.1e-132 477.2 355 67.0
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.4e-132 476.1 355 65.4
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 5.3e-132 474.9 356 65.4
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 6.9e-132 474.6 357 65.5
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 6.9e-132 474.6 356 64.9
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 9.0e-132 474.2 358 64.2
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 9.0e-132 474.2 355 65.9
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 1.2e-131 473.8 355 66.5
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 1.2e-131 473.8 355 66.2
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 1.2e-131 473.8 355 65.1
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.5e-131 473.4 355 64.8
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 3.4e-131 472.2 362 63.8
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 4.5e-131 471.9 359 63.2
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 1.3e-130 470.3 356 64.0
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.3e-130 470.3 355 64.2
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 1.3e-130 470.3 357 64.1
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 1.7e-130 469.9 355 65.1
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 1.7e-130 469.9 368 64.7
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 2.2e-130 469.5 358 64.5
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 2.2e-130 469.5 357 65.3
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 2.9e-130 469.2 365 64.1
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 4.9e-130 468.4 355 63.7
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 6.4e-130 468.0 355 64.8
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 8.4e-130 467.6 362 62.7
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 1.1e-129 467.2 356 63.8
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 1.4e-129 466.8 356 64.6
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 3.2e-129 465.7 365 61.9
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 3.2e-129 465.7 355 63.1
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 5.4e-129 464.9 359 64.3
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 9.3e-129 464.2 355 63.9
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 1.2e-128 463.8 355 64.2
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 4.6e-128 461.8 398 59.5
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 4.6e-128 461.8 356 63.5
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 7.9e-128 461.1 349 65.0
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 1.8e-127 459.9 361 61.8
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 6.7e-127 458.0 356 64.9
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.9e-126 456.4 361 61.2
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.9e-126 456.4 351 65.8
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 1.3e-125 453.8 336 64.0
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 1.3e-125 453.8 355 63.1
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 2.8e-125 452.6 357 63.6
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 2.8e-125 452.6 359 62.1
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 3.7e-125 452.2 356 64.6
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 4.8e-125 451.8 358 62.8
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 8.1e-125 451.1 356 61.2
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 2.6e-123 446.0 355 62.5
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 4.5e-123 445.3 359 61.3
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 8.4e-122 441.0 355 62.5
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 8.4e-122 441.0 358 60.6
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 8.4e-122 441.0 363 60.3
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.1e-121 440.7 367 59.4
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 4.2e-121 438.7 359 59.9
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 5.1e-119 431.8 355 60.0
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 1.5e-118 430.3 355 59.4
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 3.7e-117 425.6 355 57.5
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 3.7e-117 425.6 355 58.3
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 2.0e-115 419.9 355 55.8
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 2.6e-115 419.5 341 60.1
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.0e-111 407.5 307 65.5
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.8e-111 406.8 292 69.9
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 2.4e-100 369.8 300 60.7
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 3.0e-95 352.8 357 53.8
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 1.1e-94 350.9 357 52.4
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.7e-93 347.1 328 55.8
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 3.5e-91 339.3 298 56.4
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 7.7e-91 338.2 328 56.1
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.2e-73 279.6 213 67.6
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 2.3e-71 273.5 359 41.2
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 4.2e-65 252.7 274 49.6
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 2.6e-62 243.4 246 55.7
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 3.4e-62 243.0 361 39.6
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.0e-59 233.8 195 64.1
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.4e-55 221.1 157 66.9
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 3.4e-54 216.5 357 35.0
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 2.5e-49 200.3 115 78.3
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.8e-48 196.8 148 61.5
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 3.6e-48 196.4 126 71.4
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.4e-30 136.7 85 68.2
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 3.4e-30 136.7 199 42.2
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 7.6e-30 135.6 85 68.2
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.7e-29 134.4 85 67.1
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.2e-28 129.8 85 64.7
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 7.1e-28 129.0 134 53.0
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 2.1e-24 117.5 189 36.0
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 3.6e-24 116.7 139 43.9
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.1e-23 115.2 106 52.8
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.4e-20 104.8 58 82.8
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 1.0e-18 98.6 59 74.6
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 1.0e-18 98.6 59 74.6
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 1.3e-18 98.2 63 71.4
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 3.9e-18 96.7 190 36.8
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 2.5e-17 94.0 149 36.9
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.5e-17 94.0 60 70.0
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 2.1e-16 90.9 55 72.7
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 3.1e-15 87.0 78 51.3
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.3e-15 86.3 59 66.1
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 2.0e-14 84.3 76 52.6
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 9.3e-12 75.5 37 75.7
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 3.5e-11 73.6 131 29.8
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 6.0e-11 72.8 49 65.3
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.3e-10 70.9 68 52.9
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 6.7e-10 69.3 75 48.0
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.5e-09 68.2 50 58.0
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.9e-09 67.8 82 43.9
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 1.8e-07 61.2 64 42.2
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 4.5e-06 56.6 50 48.0


User provided reference genes

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