Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO135G0552 Papaver somniferum HOM05D005241 ORTHO05D005862 1.8e-212 742.3 352 100.0
PSO135G0092 Papaver somniferum HOM05D005241 ORTHO05D005862 2.3e-180 635.6 339 86.4
PSO384G1775 Papaver somniferum HOM05D005241 ORTHO05D005862 4.8e-178 627.9 350 84.3
PSO135G0726 Papaver somniferum HOM05D005241 ORTHO05D005862 5.5e-166 587.8 317 86.8
PSO384G2580 Papaver somniferum HOM05D005241 ORTHO05D005862 1.2e-160 570.1 317 84.9
Gohir.D06G047501 Gossypium hirsutum HOM05D005241 ORTHO05D005862 1.4e-148 530.0 308 77.3
Dinv41292 Davidia involucrata HOM05D005241 ORTHO05D005862 2.3e-148 529.3 310 76.5
Gohir.A06G047300 Gossypium hirsutum HOM05D005241 ORTHO05D005862 1.5e-147 526.6 310 76.5
TAR629G1464 Trochodendron aralioides HOM05D005241 ORTHO05D005862 1.5e-147 526.6 310 76.1
Actinidia24021 Actinidia chinensis HOM05D005241 ORTHO05D005862 5.7e-147 524.6 311 75.6
Gorai.010G053100 Gossypium raimondii HOM05D005241 ORTHO05D005862 7.5e-147 524.2 309 76.7
Sopen12g007320 Solanum pennellii HOM05D005241 ORTHO05D005862 6.4e-146 521.2 310 75.8
Aqoxy4G03021 Aquilegia oxysepala HOM05D005241 ORTHO05D005862 8.3e-146 520.8 314 75.5
MBI18_g28946_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 3.2e-145 518.8 310 75.5
Solyc12g014440.2 Solanum lycopersicum HOM05D005241 ORTHO05D005862 5.4e-145 518.1 310 75.8
Duzib150G1634 Durio zibethinus HOM05D005241 ORTHO05D005862 7.0e-145 517.7 310 75.5
Oeu043521.1 Olea europaea HOM05D005241 ORTHO05D005862 1.6e-144 516.5 310 75.2
THA.LOC104813533 Tarenaya hassleriana HOM05D005241 ORTHO05D005862 1.6e-144 516.5 310 76.1
Atru.chr7.554 Acer truncatum HOM05D005241 ORTHO05D005862 2.0e-144 516.2 310 75.2
Manes.06G028800 Manihot esculenta HOM05D005241 ORTHO05D005862 2.0e-144 516.2 310 75.5
Nn7g37052 Nelumbo nucifera HOM05D005241 ORTHO05D005862 2.7e-144 515.8 310 74.5
SalBow6G2881 Salvia bowleyana HOM05D005241 ORTHO05D005862 2.7e-144 515.8 314 74.2
CSS0029475 Camellia sinensis var. sinensis HOM05D005241 ORTHO05D005862 3.5e-144 515.4 311 74.6
COL.COLO4_16080 Corchorus olitorius HOM05D005241 ORTHO05D005862 5.9e-144 514.6 324 72.2
HanXRQChr06g0178861 Helianthus annuus HOM05D005241 ORTHO05D005862 5.9e-144 514.6 310 75.5
CiPaw.07G187700 Carya illinoinensis HOM05D005241 ORTHO05D005862 1.0e-143 513.8 310 75.8
Lsat_1_v5_gn_8_65460 Lactuca sativa HOM05D005241 ORTHO05D005862 6.6e-143 511.1 310 74.5
COL.COLO4_16078 Corchorus olitorius HOM05D005241 ORTHO05D005862 8.6e-143 510.8 304 76.0
Potri.018G097100 Populus trichocarpa HOM05D005241 ORTHO05D005862 8.6e-143 510.8 308 74.4
TWI34G1734 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 1.1e-142 510.4 309 74.8
Dinv42767 Davidia involucrata HOM05D005241 ORTHO05D005862 3.3e-142 508.8 310 75.2
Dinv43336 Davidia involucrata HOM05D005241 ORTHO05D005862 3.3e-142 508.8 310 75.2
ATR0796G313 Amborella trichopoda HOM05D005241 ORTHO05D005862 5.6e-142 508.1 311 74.6
TWI34G0564 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 5.6e-142 508.1 309 74.4
Lj9A730T54 Lonicera japonica HOM05D005241 ORTHO05D005862 7.3e-142 507.7 304 75.3
SalBow6G2671 Salvia bowleyana HOM05D005241 ORTHO05D005862 7.3e-142 507.7 315 74.0
Ciclev10008429m.g Citrus clementina HOM05D005241 ORTHO05D005862 9.5e-142 507.3 313 74.1
ECA236G3445 Erigeron canadensis HOM05D005241 ORTHO05D005862 9.5e-142 507.3 311 74.0
SGA_v2.0_scaffold66G22503 Striga asiatica HOM05D005241 ORTHO05D005862 9.5e-142 507.3 315 73.3
Thecc.09G163500 Theobroma cacao HOM05D005241 ORTHO05D005862 9.5e-142 507.3 310 74.2
MSTRG.19688 Avicennia marina HOM05D005241 ORTHO05D005862 1.2e-141 506.9 312 72.8
Phvul.003G150000 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 1.2e-141 506.9 308 75.0
AL8G33730 Arabidopsis lyrata HOM05D005241 ORTHO05D005862 1.6e-141 506.5 310 76.1
Haze_22151 Corylus avellana HOM05D005241 ORTHO05D005862 1.6e-141 506.5 304 75.7
Sp6g19390 Schrenkiella parvula HOM05D005241 ORTHO05D005862 1.6e-141 506.5 316 74.7
Thecc.09G163700 Theobroma cacao HOM05D005241 ORTHO05D005862 1.6e-141 506.5 328 69.8
C03p14830 Brassica napus HOM05D005241 ORTHO05D005862 2.1e-141 506.1 310 74.5
DCAR_014714 Daucus carota HOM05D005241 ORTHO05D005862 2.1e-141 506.1 344 69.2
Thhalv10013983m.g Eutrema salsugineum HOM05D005241 ORTHO05D005862 2.1e-141 506.1 310 75.8
Glyma.17G067600 Glycine max HOM05D005241 ORTHO05D005862 2.1e-141 506.1 310 74.2
Medtr4g129200 Medicago truncatula HOM05D005241 ORTHO05D005862 2.1e-141 506.1 312 73.4
TPR.G5349 Trifolium pratense HOM05D005241 ORTHO05D005862 2.8e-141 505.8 310 72.9
RcHm_v2.0_Chr4g0404611 Rosa chinensis HOM05D005241 ORTHO05D005862 3.6e-141 505.4 310 73.5
AT5G57700 Arabidopsis thaliana HOM05D005241 ORTHO05D005862 4.7e-141 505.0 310 75.5
Ca_21190_v3 Cicer arietinum L. HOM05D005241 ORTHO05D005862 6.2e-141 504.6 310 72.3
Glyma.13G092800 Glycine max HOM05D005241 ORTHO05D005862 6.2e-141 504.6 310 74.2
Os07g0516000 Oryza sativa ssp. japonica HOM05D005241 ORTHO05D005862 8.0e-141 504.2 311 73.6
PGR102G1178 Punica granatum HOM05D005241 ORTHO05D005862 8.0e-141 504.2 306 73.9
FAN07G2217 Fragaria x ananassa HOM05D005241 ORTHO05D005862 1.0e-140 503.8 310 73.2
CDE10G0441 Ceratophyllum demersum HOM05D005241 ORTHO05D005862 1.8e-140 503.1 317 71.9
FAN17G0752 Fragaria x ananassa HOM05D005241 ORTHO05D005862 2.3e-140 502.7 310 72.9
A03p12620 Brassica napus HOM05D005241 ORTHO05D005862 5.2e-140 501.5 310 73.9
CARHR271450 Cardamine hirsuta HOM05D005241 ORTHO05D005862 5.2e-140 501.5 310 74.5
FvH4_4g09810 Fragaria vesca HOM05D005241 ORTHO05D005862 6.8e-140 501.1 310 73.2
FAN12G0682 Fragaria x ananassa HOM05D005241 ORTHO05D005862 6.8e-140 501.1 310 73.2
arahy.Tifrunner.gnm1.ann1.RWXM46 Arachis hypogaea HOM05D005241 ORTHO05D005862 8.9e-140 500.7 310 73.2
BolC3t13925H Brassica oleracea HOM05D005241 ORTHO05D005862 8.9e-140 500.7 310 73.9
Lalb_Chr07g0180171 Lupinus albus HOM05D005241 ORTHO05D005862 8.9e-140 500.7 310 72.3
Hund09015 Selenicereus undatus HOM05D005241 ORTHO05D005862 8.9e-140 500.7 327 71.6
QL02p096102 Quercus lobata HOM05D005241 ORTHO05D005862 1.5e-139 500.0 325 71.4
BraA03t10577Z Brassica rapa HOM05D005241 ORTHO05D005862 2.0e-139 499.6 310 73.9
unitig_0.g567 Utricularia gibba HOM05D005241 ORTHO05D005862 3.4e-139 498.8 349 66.5
CsaV3_1G029530 Cucumis sativus L. HOM05D005241 ORTHO05D005862 7.5e-139 497.7 309 72.5
MD13G1261500 Malus domestica HOM05D005241 ORTHO05D005862 9.8e-139 497.3 310 71.9
Psat4g010840 Pisum sativum HOM05D005241 ORTHO05D005862 1.3e-138 496.9 310 72.9
VMungo1215G3242 Vigna mungo HOM05D005241 ORTHO05D005862 2.2e-138 496.1 302 74.2
Lalb_Chr07g0180161 Lupinus albus HOM05D005241 ORTHO05D005862 2.9e-138 495.7 310 71.9
Aa31LG3G13540 Aethionema arabicum HOM05D005241 ORTHO05D005862 3.7e-138 495.4 312 73.4
Psat4g010800 Pisum sativum HOM05D005241 ORTHO05D005862 4.9e-138 495.0 303 73.3
Sabra18G0084300 Salix brachista HOM05D005241 ORTHO05D005862 4.9e-138 495.0 304 73.7
Gohir.A05G345818 Gossypium hirsutum HOM05D005241 ORTHO05D005862 1.1e-137 493.8 316 70.9
vmacro13085 Vaccinium macrocarpon HOM05D005241 ORTHO05D005862 1.4e-137 493.4 310 71.0
CANSAT11G2449 Cannabis sativa HOM05D005241 ORTHO05D005862 1.9e-137 493.0 309 71.5
Cc06_g13790 Coffea canephora HOM05D005241 ORTHO05D005862 3.2e-137 492.3 314 72.9
Medtr4g129180 Medicago truncatula HOM05D005241 ORTHO05D005862 4.1e-137 491.9 310 72.3
Phvul.003G150200 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 5.4e-137 491.5 309 71.8
Lj4g0014860 Lotus japonicus HOM05D005241 ORTHO05D005862 9.2e-137 490.7 304 74.0
arahy.Tifrunner.gnm1.ann1.4YP8RP Arachis hypogaea HOM05D005241 ORTHO05D005862 1.2e-136 490.3 304 73.0
Eucgr.C02440 Eucalyptus grandis HOM05D005241 ORTHO05D005862 3.5e-136 488.8 305 71.5
Rhsim01G0009500 Rhododendron simsii HOM05D005241 ORTHO05D005862 1.7e-135 486.5 318 69.2
ClCG06G012960 Citrullus lanatus HOM05D005241 ORTHO05D005862 5.0e-135 485.0 309 71.8
Gorai.012G095700 Gossypium raimondii HOM05D005241 ORTHO05D005862 4.3e-134 481.9 310 71.3
Gohir.D04G085700 Gossypium hirsutum HOM05D005241 ORTHO05D005862 1.2e-133 480.3 310 71.0
HPP92_013485 Vanilla planifolia HOM05D005241 ORTHO05D005862 3.6e-133 478.8 311 71.1
Peaxi162Scf00078g00547 Petunia axillaris HOM05D005241 ORTHO05D005862 3.1e-132 475.7 303 71.3
Lj4g0023001 Lotus japonicus HOM05D005241 ORTHO05D005862 5.8e-131 471.5 321 68.2
Os07g0516050 Oryza sativa ssp. japonica HOM05D005241 ORTHO05D005862 1.3e-130 470.3 315 66.3
EL10Ac8g18255 Beta vulgaris HOM05D005241 ORTHO05D005862 1.7e-130 469.9 305 72.1
Glyma.13G092900 Glycine max HOM05D005241 ORTHO05D005862 3.7e-130 468.8 310 70.6
AUR62040288 Chenopodium quinoa HOM05D005241 ORTHO05D005862 1.9e-129 466.5 306 71.9
SEGI_10163 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 9.2e-129 464.2 311 68.2
Nitab4.5_0000168g0090 Nicotiana tabacum HOM05D005241 ORTHO05D005862 4.0e-124 448.7 317 66.6
Nitab4.5_0006743g0030 Nicotiana tabacum HOM05D005241 ORTHO05D005862 3.4e-123 445.7 317 66.6
Peaxi162Scf00339g00098 Petunia axillaris HOM05D005241 ORTHO05D005862 4.6e-120 435.3 309 68.0
SMO351G0057 Selaginella moellendorffii HOM05D005241 ORTHO05D005862 8.6e-119 431.0 305 63.6
Sc08g0005390 Simmondsia chinensis HOM05D005241 ORTHO05D005862 9.6e-118 427.6 306 66.3
Zm00001eb105960 Zea mays HOM05D005241 ORTHO05D005862 9.6e-118 427.6 277 69.3
PGSC0003DMG400012851 Solanum tuberosum HOM05D005241 ORTHO05D005862 3.6e-117 425.6 303 66.7
Mapoly0080s0044 Marchantia polymorpha HOM05D005241 ORTHO05D005862 6.2e-117 424.9 310 62.9
Zm00001eb105910 Zea mays HOM05D005241 ORTHO05D005862 1.8e-116 423.3 288 64.9
HPP92_026039 Vanilla planifolia HOM05D005241 ORTHO05D005862 3.1e-116 422.5 311 64.6
AUR62039979 Chenopodium quinoa HOM05D005241 ORTHO05D005862 3.2e-113 412.5 305 60.0
Hma1.2p1_0921F.1_g236680 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 3.2e-113 412.5 329 61.4
Hma1.2p1_2604F.1_g325280 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 3.2e-113 412.5 329 61.4
EL10Ac8g18254 Beta vulgaris HOM05D005241 ORTHO05D005862 1.4e-108 397.1 310 56.8
Sed0027242 Sechium edule HOM05D005241 ORTHO05D005862 2.0e-107 393.3 249 72.3
FAN22G1361 Fragaria x ananassa HOM05D005241 ORTHO05D005862 2.9e-106 389.4 439 48.1
Pp3c3_37310 Physcomitrium patens HOM05D005241 ORTHO05D005862 3.8e-106 389.0 305 58.0
Hund26388 Selenicereus undatus HOM05D005241 ORTHO05D005862 1.6e-101 373.6 310 57.4
Migut.J01437 Erythranthe guttata HOM05D005241 ORTHO05D005862 1.6e-96 357.1 210 78.1
Carub.0008s1821 Capsella rubella HOM05D005241 ORTHO05D005862 2.5e-89 333.2 200 75.5
Cpa.g.sc450.6 Carica papaya HOM05D005241 ORTHO05D005862 3.5e-88 329.3 202 72.3
MELO3C029512.2 Cucumis melo HOM05D005241 ORTHO05D005862 2.4e-84 316.6 251 61.0
SEGI_04095 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 4.1e-84 315.8 214 68.2
Prupe.1G095300 Prunus persica HOM05D005241 ORTHO05D005862 8.5e-74 281.6 165 75.2
EL10Ac9g22414 Beta vulgaris HOM05D005241 ORTHO05D005862 1.1e-73 281.2 304 45.4
TPR.G5299 Trifolium pratense HOM05D005241 ORTHO05D005862 1.4e-73 280.8 180 70.0
TPR.G40451 Trifolium pratense HOM05D005241 ORTHO05D005862 1.2e-72 277.7 176 71.6
Nitab4.5_0000692g0020 Nicotiana tabacum HOM05D005241 ORTHO05D005862 2.6e-67 260.0 311 46.0
EL10Ac7g17876 Beta vulgaris HOM05D005241 ORTHO05D005862 4.4e-46 189.5 207 43.5
MBI18_g46216_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 4.7e-40 169.5 99 78.8
MELO3C017513.2 Cucumis melo HOM05D005241 ORTHO05D005862 8.8e-39 165.2 97 71.1
Hund09002 Selenicereus undatus HOM05D000185 ORTHO05D000105 7.0e-36 155.6 105 69.5
Glyma.17G067650 Glycine max HOM05D005241 ORTHO05D005862 1.7e-34 151.0 87 75.9
Nn8g41235 Nelumbo nucifera HOM05D005241 ORTHO05D005862 2.7e-27 127.1 79 68.4
AagrBONN_evm.TU.Sc2ySwM_228.5641 Anthoceros agrestis HOM05D005241 ORTHO05D005862 5.9e-27 125.9 309 28.8
Sc08g0005370 Simmondsia chinensis HOM05D005241 ORTHO05D005862 8.6e-26 122.1 79 73.4
FAN12G2859 Fragaria x ananassa HOM05D005241 ORTHO05D005862 1.9e-25 120.9 69 78.3
MBI18_g29570_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 3.3e-25 120.2 91 62.6
SHI03002 Sapria himalayana HOM05D005241 ORTHO05D005862 4.0e-23 113.2 318 29.6
CBR_g30152 Chara braunii HOM05D010403 ORTHO05D005862 1.1e-20 105.1 304 28.3
Peaxi162Scf00014g00192 Petunia axillaris HOM05D005241 ORTHO05D005862 4.6e-19 99.8 65 72.3
CBR_g30241 Chara braunii HOM05D005241 ORTHO05D005862 8.1e-16 89.0 346 26.0
Peaxi162Scf00013g00004 Petunia axillaris HOM05D000090 ORTHO05D001322 3.3e-09 67.0 38 68.4
MBI18_g11928_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 4.3e-09 66.6 47 70.2
MBI19_g36862_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 5.2e-07 59.7 48 50.0
Peaxi162Scf00609g00310 Petunia axillaris HOM05D004037 ORTHO05D019316 5.2e-07 59.7 43 65.1


User provided reference genes

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