Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO135G0498 Papaver somniferum HOM05D001772 ORTHO05D008903 8.0e-236 820.1 428 100.0
PSO384G4631 Papaver somniferum HOM05D001772 ORTHO05D008903 1.1e-219 766.5 428 93.0
Aqoxy7G00133 Aquilegia oxysepala HOM05D001772 ORTHO05D008903 9.4e-168 594.0 437 65.4
TAR375G0197 Trochodendron aralioides HOM05D001772 ORTHO05D008903 1.1e-163 580.5 438 63.7
QL04p013773 Quercus lobata HOM05D001772 ORTHO05D008903 6.5e-161 571.2 388 68.8
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 3.2e-160 568.9 388 68.6
Nn3g19051 Nelumbo nucifera HOM05D001772 ORTHO05D008903 1.5e-157 560.1 385 68.6
CSS0012714 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 7.4e-157 557.8 394 67.0
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 9.7e-157 557.4 395 66.1
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 6.3e-156 554.7 382 67.5
Medtr5g025480 Medicago truncatula HOM05D001772 ORTHO05D008903 1.4e-155 553.5 383 67.6
VMungo0540G0918 Vigna mungo HOM05D001772 ORTHO05D008903 2.4e-155 552.7 385 67.8
Prupe.2G185600 Prunus persica HOM05D001772 ORTHO05D008903 4.1e-155 552.0 384 69.3
Manes.05G024600 Manihot esculenta HOM05D001772 ORTHO05D008903 5.3e-155 551.6 389 66.8
TPR.G8988 Trifolium pratense HOM05D001772 ORTHO05D008903 1.6e-154 550.1 389 65.3
Ciclev10020231m.g Citrus clementina HOM05D001772 ORTHO05D008903 2.0e-154 549.7 389 67.4
GSVIVG01027076001 Vitis vinifera HOM05D001772 ORTHO05D008903 2.0e-154 549.7 390 65.6
Lalb_Chr04g0261581 Lupinus albus HOM05D001772 ORTHO05D008903 3.5e-154 548.9 356 72.5
MD07G1147600 Malus domestica HOM05D001772 ORTHO05D008903 7.7e-154 547.7 383 68.4
FvH4_7g16200 Fragaria vesca HOM05D001772 ORTHO05D008903 1.3e-153 547.0 385 68.3
Gohir.D12G114800 Gossypium hirsutum HOM05D001772 ORTHO05D008903 3.8e-153 545.4 390 65.1
Psat2g145680 Pisum sativum HOM05D001772 ORTHO05D008903 3.8e-153 545.4 384 67.2
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 6.5e-153 544.7 383 65.8
Gohir.A12G111500 Gossypium hirsutum HOM05D001772 ORTHO05D008903 1.5e-152 543.5 390 64.9
Gorai.008G124300 Gossypium raimondii HOM05D001772 ORTHO05D008903 2.5e-152 542.7 390 64.6
Thecc.01G344900 Theobroma cacao HOM05D001772 ORTHO05D008903 2.5e-152 542.7 397 64.0
Atru.chr5.644 Acer truncatum HOM05D001772 ORTHO05D008903 5.5e-152 541.6 392 66.3
arahy.Tifrunner.gnm1.ann1.NY4TXX Arachis hypogaea HOM05D001772 ORTHO05D008903 5.5e-152 541.6 366 69.4
RcHm_v2.0_Chr1g0359211 Rosa chinensis HOM05D001772 ORTHO05D008903 5.5e-152 541.6 436 62.6
Potri.014G096700 Populus trichocarpa HOM05D001772 ORTHO05D008903 7.2e-152 541.2 391 67.8
Ca_25036_v3 Cicer arietinum L. HOM05D001772 ORTHO05D008903 1.6e-151 540.0 389 64.5
arahy.Tifrunner.gnm1.ann1.HV5NER Arachis hypogaea HOM05D001772 ORTHO05D008903 2.7e-151 539.3 366 68.9
Duzib138G1524 Durio zibethinus HOM05D001772 ORTHO05D008903 2.7e-151 539.3 370 67.3
TWI59G0809 Tripterygium wilfordii HOM05D001772 ORTHO05D008903 2.6e-149 532.7 391 66.8
vmacro13174 Vaccinium macrocarpon HOM05D001772 ORTHO05D008903 2.6e-149 532.7 391 65.2
Lj1g0009750 Lotus japonicus HOM05D001772 ORTHO05D008903 1.3e-148 530.4 376 67.3
Eucgr.E00067 Eucalyptus grandis HOM05D001772 ORTHO05D008903 2.2e-148 529.6 395 66.1
Aa31LG5G920 Aethionema arabicum HOM05D001772 ORTHO05D008903 3.7e-148 528.9 389 63.8
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 8.2e-148 527.7 388 66.5
MD01G1078600 Malus domestica HOM05D001772 ORTHO05D008903 1.8e-147 526.6 366 68.3
AT4G01040 Arabidopsis thaliana HOM05D001772 ORTHO05D008903 2.4e-147 526.2 390 61.5
THA.LOC104825876 Tarenaya hassleriana HOM05D001772 ORTHO05D008903 4.1e-147 525.4 391 64.7
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 7.0e-147 524.6 363 68.9
Carub.0006s3610 Capsella rubella HOM05D001772 ORTHO05D008903 1.2e-146 523.9 390 62.1
Sp6g01100 Schrenkiella parvula HOM05D001772 ORTHO05D008903 1.2e-146 523.9 388 61.6
COL.COLO4_06307 Corchorus olitorius HOM05D001772 ORTHO05D008903 2.7e-146 522.7 390 64.6
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 4.5e-146 521.9 379 66.8
Migut.N01555 Erythranthe guttata HOM05D001772 ORTHO05D008903 1.7e-145 520.0 389 62.2
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.7e-145 520.0 379 66.8
Sopen05g028720 Solanum pennellii HOM05D001772 ORTHO05D008903 1.7e-145 520.0 368 66.8
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 6.5e-145 518.1 389 65.8
Haze_15635 Corylus avellana HOM05D001772 ORTHO05D008903 1.1e-144 517.3 403 63.0
Lsat_1_v5_gn_3_139600 Lactuca sativa HOM05D001772 ORTHO05D008903 1.9e-144 516.5 368 66.8
Thhalv10028671m.g Eutrema salsugineum HOM05D001772 ORTHO05D008903 2.5e-144 516.2 392 61.2
CARHR249250 Cardamine hirsuta HOM05D001772 ORTHO05D008903 3.2e-144 515.8 392 61.0
PGSC0003DMG402033880 Solanum tuberosum HOM05D001772 ORTHO05D008903 3.2e-144 515.8 364 66.5
Rhsim07G0005700 Rhododendron simsii HOM05D001772 ORTHO05D008903 7.2e-144 514.6 385 64.2
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 9.4e-144 514.2 375 66.7
Sc01g0002840 Simmondsia chinensis HOM05D001772 ORTHO05D008903 1.2e-143 513.8 384 63.0
CAN.G239.5 Capsicum annuum HOM05D001772 ORTHO05D008903 3.6e-143 512.3 439 57.9
Cc02_g39160 Coffea canephora HOM05D001772 ORTHO05D008903 2.3e-142 509.6 395 62.5
Solyc05g050320.4 Solanum lycopersicum HOM05D001772 ORTHO05D008903 2.3e-142 509.6 354 67.5
Oeu007903.1 Olea europaea HOM05D001772 ORTHO05D008903 4.4e-141 505.4 363 63.6
Glyma.03G256800 Glycine max HOM05D001772 ORTHO05D008903 1.7e-140 503.4 380 63.9
MBI06_g46729_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D008903 2.2e-140 503.1 420 59.0
Peaxi162Scf00403g00519 Petunia axillaris HOM05D001772 ORTHO05D008903 3.7e-140 502.3 354 66.1
SalBow5G1378 Salvia bowleyana HOM05D001772 ORTHO05D008903 4.8e-140 501.9 418 59.1
Sed0004684 Sechium edule HOM05D001772 ORTHO05D008903 1.8e-139 500.0 390 63.3
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 1.2e-138 497.3 380 60.8
EL10Ac1g00295 Beta vulgaris HOM05D001772 ORTHO05D008903 2.0e-138 496.5 389 59.9
BcaC01g06839 Brassica carinata HOM05D001772 ORTHO05D008903 2.7e-138 496.1 381 60.1
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 3.5e-138 495.7 380 60.5
PGR042G2345 Punica granatum HOM05D001772 ORTHO05D008903 5.9e-138 495.0 389 59.6
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 1.3e-137 493.8 380 60.3
BcaB01g02345 Brassica carinata HOM05D001772 ORTHO05D008903 2.9e-137 492.7 380 60.8
ClCG05G000920 Citrullus lanatus HOM05D001772 ORTHO05D008903 2.9e-137 492.7 394 61.4
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 5.5e-136 488.4 380 59.2
Lj9A595T55 Lonicera japonica HOM05D001772 ORTHO05D008903 7.2e-136 488.0 321 69.5
CSS0002891 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 1.2e-135 487.3 359 64.1
SGA_v2.0_scaffold11G05728 Striga asiatica HOM05D001772 ORTHO05D008903 2.1e-135 486.5 387 59.7
AUR62004469 Chenopodium quinoa HOM05D001772 ORTHO05D008903 3.6e-135 485.7 365 62.2
Phvul.006G111900 Phaseolus vulgaris HOM05D001772 ORTHO05D008903 3.6e-135 485.7 321 71.3
AUR62023481 Chenopodium quinoa HOM05D001772 ORTHO05D008903 6.1e-135 485.0 365 62.5
CsaV3_3G008150 Cucumis sativus L. HOM05D001772 ORTHO05D008903 6.1e-135 485.0 394 60.9
CDE10G0091 Ceratophyllum demersum HOM05D001772 ORTHO05D008903 1.4e-134 483.8 390 60.0
HanXRQChr11g0353031 Helianthus annuus HOM05D001772 ORTHO05D008903 1.8e-134 483.4 356 62.9
DCAR_005380 Daucus carota HOM05D001772 ORTHO05D008903 4.9e-132 475.3 479 50.7
Ah.05g179760 Amaranthus hybridus HOM05D001772 ORTHO05D008903 3.1e-131 472.6 384 59.4
Hund27212 Selenicereus undatus HOM05D001772 ORTHO05D008903 1.0e-129 467.6 428 54.0
Nitab4.5_0000258g0130 Nicotiana tabacum HOM05D001772 ORTHO05D008903 1.1e-128 464.2 387 58.4
Zm00001eb358410 Zea mays HOM05D001772 ORTHO05D008903 1.2e-127 460.7 366 60.7
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 8.3e-124 448.0 351 61.3
HPP92_005515 Vanilla planifolia HOM05D001772 ORTHO05D008903 3.2e-123 446.0 368 59.2
MELO3C006034.2 Cucumis melo HOM05D001772 ORTHO05D008903 1.2e-117 427.6 394 56.3
Cpa.g.sc273.9 Carica papaya HOM05D001772 ORTHO05D008903 4.1e-115 419.1 304 63.8
Pp3c22_2040 Physcomitrium patens HOM05D001772 ORTHO05D008903 3.3e-104 382.9 368 51.4
AL6G52340 Arabidopsis lyrata HOM05D001772 ORTHO05D008903 4.6e-98 362.5 253 66.0
SEGI_01392 Sequoiadendron giganteum HOM05D001772 ORTHO05D008903 3.9e-97 359.4 330 53.9
AagrBONN_evm.TU.Sc2ySwM_344.1652 Anthoceros agrestis HOM05D001772 ORTHO05D008903 1.2e-90 337.8 411 44.3
Mapoly0102s0038 Marchantia polymorpha HOM05D001772 ORTHO05D008903 7.8e-90 335.1 339 49.6
SMO347G0199 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 9.9e-85 318.2 335 48.1
SMO167G0031 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 1.7e-84 317.4 333 48.0
Actinidia10113 Actinidia chinensis HOM05D001772 ORTHO05D008903 5.4e-83 312.4 227 65.6
CBR_g3968 Chara braunii HOM05D001772 ORTHO05D008903 7.9e-82 308.5 404 40.6
Nitab4.5_0004506g0060 Nicotiana tabacum HOM05D001772 ORTHO05D008903 6.7e-73 278.9 353 43.6
CiPaw.01G074400 Carya illinoinensis HOM05D001772 ORTHO05D008903 4.5e-69 266.2 185 67.6
Cre03.g200650 Chlamydomonas reinhardtii HOM05D001772 ORTHO05D008903 1.6e-63 247.7 381 34.9
ATR0589G019 Amborella trichopoda HOM05D001772 ORTHO05D008903 2.2e-52 210.7 182 56.6
Os01g0619800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D008903 2.8e-39 167.2 144 52.8
Nitab4.5_0015177g0010 Nicotiana tabacum HOM05D001772 ORTHO05D000634 3.8e-36 156.8 120 61.7
Zm00001eb297790 Zea mays HOM05D001772 ORTHO05D023027 9.1e-30 135.6 118 59.3
Glyma.19G255000 Glycine max HOM05D001772 ORTHO05D008903 2.4e-14 84.3 59 64.4
Nitab4.5_0015177g0020 Nicotiana tabacum HOM05D001772 ORTHO05D008903 7.0e-14 82.8 50 66.0
Zm00001eb098470 Zea mays HOM05D001772 ORTHO05D008903 1.1e-06 58.9 53 56.6


User provided reference genes

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