Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 2.9e-191 671.8 354 100.0
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 3.0e-188 661.8 354 97.7
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 2.9e-146 522.3 347 78.4
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 3.2e-145 518.8 352 78.4
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 2.1e-141 506.1 349 75.9
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 1.8e-140 503.1 340 75.6
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 9.2e-137 490.7 353 72.0
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 4.6e-136 488.4 346 73.4
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 1.7e-135 486.5 354 70.6
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 2.3e-135 486.1 354 71.8
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 3.0e-135 485.7 346 71.1
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 1.9e-134 483.0 351 69.8
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 4.3e-134 481.9 353 71.1
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 5.6e-134 481.5 351 69.8
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 2.1e-133 479.6 346 70.5
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 2.8e-133 479.2 345 72.2
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 8.1e-133 477.6 352 70.5
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 9.0e-132 474.2 345 70.7
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 9.0e-132 474.2 345 71.0
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 2.0e-131 473.0 352 70.7
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 2.0e-131 473.0 354 70.3
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 5.8e-131 471.5 348 69.8
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 1.3e-130 470.3 340 71.2
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 2.2e-130 469.5 349 70.2
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 4.9e-130 468.4 355 68.7
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 1.9e-129 466.5 329 71.7
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 1.9e-129 466.5 352 69.0
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 9.3e-129 464.2 345 69.0
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 1.6e-128 463.4 345 70.1
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 2.1e-128 463.0 348 69.8
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 1.0e-127 460.7 353 68.8
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 3.9e-127 458.8 346 69.1
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 6.6e-127 458.0 330 70.0
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 8.7e-127 457.6 348 69.0
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 1.9e-126 456.4 345 69.0
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 3.6e-125 452.2 354 67.2
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 9.0e-124 447.6 373 65.1
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 9.0e-124 447.6 355 67.9
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 5.8e-123 444.9 347 67.7
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 6.4e-122 441.4 343 67.6
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 1.1e-121 440.7 348 66.7
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 1.2e-120 437.2 326 69.0
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 2.1e-120 436.4 351 65.8
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 2.1e-120 436.4 330 68.2
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 4.6e-120 435.3 340 66.2
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 7.9e-120 434.5 352 65.1
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 1.0e-119 434.1 344 68.0
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 1.8e-119 433.3 433 57.0
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 2.3e-119 433.0 349 67.0
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 2.3e-119 433.0 346 65.9
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 2.3e-119 433.0 350 65.1
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 3.9e-119 432.2 352 65.9
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 3.9e-119 432.2 338 67.5
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 3.9e-119 432.2 341 64.8
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 6.7e-119 431.4 346 65.6
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 6.7e-119 431.4 354 65.0
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 5.6e-118 428.3 354 65.8
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 1.3e-117 427.2 354 65.0
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 1.3e-117 427.2 351 64.4
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 1.3e-117 427.2 344 63.4
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 2.1e-117 426.4 297 73.1
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 2.8e-117 426.0 351 64.1
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 3.7e-117 425.6 337 66.5
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 1.4e-116 423.7 326 68.1
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 1.4e-116 423.7 326 68.1
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 1.8e-116 423.3 339 66.7
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 9.0e-116 421.0 351 64.7
Haze_26014 Corylus avellana HOM05D002335 ORTHO05D006282 1.2e-115 420.6 384 60.7
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.2e-115 420.6 346 65.6
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 1.5e-115 420.2 342 65.5
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 2.6e-115 419.5 351 64.1
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 2.6e-115 419.5 304 72.4
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 4.5e-115 418.7 333 65.8
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 9.9e-115 417.5 326 67.2
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 2.2e-114 416.4 349 64.8
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 2.2e-114 416.4 345 62.9
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 2.2e-114 416.4 346 64.2
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 4.9e-114 415.2 351 64.4
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 4.9e-114 415.2 346 63.0
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 6.4e-114 414.8 352 64.2
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 3.2e-113 412.5 346 62.7
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 3.2e-113 412.5 344 63.1
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 1.6e-112 410.2 346 62.1
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 2.1e-112 409.8 344 62.8
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 4.6e-112 408.7 344 62.5
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 1.8e-111 406.8 318 65.7
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 3.0e-111 406.0 371 60.9
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 1.1e-110 404.1 292 72.6
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 3.8e-106 389.0 332 63.6
Atru.chr7.1708 Acer truncatum HOM05D002335 ORTHO05D006282 4.9e-106 388.7 278 70.9
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 7.9e-104 381.3 346 61.0
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 2.3e-103 379.8 321 62.0
Prupe.7G198700 Prunus persica HOM05D002335 ORTHO05D006282 9.7e-102 374.4 343 59.2
QL11p000781 Quercus lobata HOM05D002335 ORTHO05D006282 4.8e-101 372.1 385 57.1
vmacro06343 Vaccinium macrocarpon HOM05D002335 ORTHO05D006282 1.1e-100 370.9 409 54.3
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 1.8e-100 370.2 306 64.7
HPP92_004366 Vanilla planifolia HOM05D002335 ORTHO05D006282 2.4e-100 369.8 340 58.8
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 1.5e-99 367.1 296 65.5
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 1.3e-98 364.0 340 60.3
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 8.5e-98 361.3 346 59.2
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.9e-97 360.1 400 53.0
Psat1g134320 Pisum sativum HOM05D002335 ORTHO05D006282 3.2e-97 359.4 266 72.2
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 1.2e-96 357.5 297 66.0
SEGI_06962 Sequoiadendron giganteum HOM05D002335 ORTHO05D006282 1.5e-94 350.5 346 53.8
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 9.7e-94 347.8 396 53.8
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 1.7e-93 347.1 291 65.6
Aa31LG1G14100 Aethionema arabicum HOM05D002335 ORTHO05D006282 7.2e-89 331.6 440 46.1
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.4e-87 327.4 409 50.1
Psat3g025000 Pisum sativum HOM05D002335 ORTHO05D006282 3.0e-87 326.2 248 66.9
SHI23809 Sapria himalayana HOM05D002335 ORTHO05D006282 1.8e-84 317.0 235 69.4
FAN23G1616 Fragaria x ananassa HOM05D002335 ORTHO05D006282 1.3e-82 310.8 243 68.7
CDE02G0868 Ceratophyllum demersum HOM05D002335 ORTHO05D006282 2.9e-82 309.7 232 68.5
Cpa.g.sc28.33 Carica papaya HOM05D002335 ORTHO05D006282 8.5e-82 308.1 229 69.0
Sc18g0002560 Simmondsia chinensis HOM05D002335 ORTHO05D006282 9.4e-81 304.7 244 67.6
Lj7C687T14 Lonicera japonica HOM05D002335 ORTHO05D006282 2.3e-79 300.1 260 63.5
Peaxi162Scf00127g01814 Petunia axillaris HOM05D002335 ORTHO05D006282 5.3e-76 288.9 277 62.1
Pp3c22_13730 Physcomitrium patens HOM05D002335 ORTHO05D006282 6.1e-72 275.4 332 48.5
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 1.2e-70 271.2 317 50.8
Mapoly0011s0025 Marchantia polymorpha HOM05D002335 ORTHO05D006282 1.5e-70 270.8 331 46.2
DCAR_028335 Daucus carota HOM05D002335 ORTHO05D006282 4.2e-65 252.7 188 71.3
Pp3c2_6470 Physcomitrium patens HOM05D002335 ORTHO05D006282 5.7e-62 242.3 347 41.5
Lalb_Chr23g0276371 Lupinus albus HOM05D002335 ORTHO05D006282 3.7e-61 239.6 204 59.8
Lalb_Chr07g0181191 Lupinus albus HOM05D002335 ORTHO05D006282 3.1e-60 236.5 238 52.9
arahy.Tifrunner.gnm1.ann1.3UYF95 Arachis hypogaea HOM05D002335 ORTHO05D006282 1.2e-59 234.6 223 55.6
Lalb_Chr23g0276381 Lupinus albus HOM05D002335 ORTHO05D006282 3.7e-53 213.0 144 80.6
SMO358G0254 Selaginella moellendorffii HOM05D002335 ORTHO05D006282 1.2e-51 208.0 214 55.1
Actinidia38482 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.9e-49 200.7 148 66.2
Lalb_Chr07g0181181 Lupinus albus HOM05D002335 ORTHO05D006282 1.5e-46 191.0 170 64.7
MD02G1091600 Malus domestica HOM05D002335 ORTHO05D006282 3.9e-42 176.4 145 59.3
Nitab4.5_0000343g0220 Nicotiana tabacum HOM05D002335 ORTHO05D006282 5.0e-42 176.0 129 67.4
Cpa.g.sc28.37 Carica papaya HOM05D002335 ORTHO05D006282 1.5e-33 147.9 103 75.7
Actinidia38481 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.9e-33 147.5 125 68.0
AagrBONN_evm.TU.Sc2ySwM_344.5493 Anthoceros agrestis HOM05D002335 ORTHO05D006282 3.3e-33 146.7 329 31.9
Nitab4.5_0000343g0210 Nicotiana tabacum HOM05D002335 ORTHO05D006282 6.2e-32 142.5 98 75.5
CBR_g26318 Chara braunii HOM05D002335 ORTHO05D006282 2.4e-23 114.0 224 34.4
Solyc07g041890.1 Solanum lycopersicum HOM05D002335 ORTHO05D006282 3.1e-23 113.6 182 45.6
Ah.14g084930 Amaranthus hybridus HOM05D002335 ORTHO05D006282 4.4e-22 109.8 77 72.7
Medtr2g041390 Medicago truncatula HOM05D002335 ORTHO05D006282 2.7e-19 100.5 102 57.8
Oeu011491.2 Olea europaea HOM05D002335 ORTHO05D006282 3.0e-18 97.1 78 60.3
PSO210G7126 Papaver somniferum HOM05D002335 ORTHO05D006282 5.1e-18 96.3 70 77.1
arahy.Tifrunner.gnm1.ann1.HK8DFN Arachis hypogaea HOM05D002335 ORTHO05D006282 2.1e-16 90.9 99 47.5
Psat6g064600 Pisum sativum HOM05D004726 ORTHO05D005986 4.9e-13 79.7 53 77.4
Cpa.g.c47777 Carica papaya HOM05D002335 ORTHO05D006282 6.4e-13 79.3 52 71.2
PGSC0003DMG400019032 Solanum tuberosum HOM05D002335 ORTHO05D006282 1.4e-12 78.2 57 68.4
Oeu031390.1 Olea europaea HOM05D002335 ORTHO05D006282 3.3e-09 67.0 50 64.0
arahy.Tifrunner.gnm1.ann1.S4WZ34 Arachis hypogaea HOM05D000237 ORTHO05D017465 7.3e-09 65.9 57 49.1
arahy.Tifrunner.gnm1.ann1.Y6L4BT Arachis hypogaea HOM05D000237 ORTHO05D017465 4.0e-07 60.1 72 40.3
arahy.Tifrunner.gnm1.ann1.WCUD5S Arachis hypogaea HOM05D000237 ORTHO05D017465 9.0e-07 58.9 56 46.4
CAN.G2458.1 Capsicum annuum HOM05D002335 ORTHO05D006282 2.0e-06 57.8 74 48.6


User provided reference genes

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