Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 5.8e-144 514.2 265 100.0
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 5.0e-127 458.0 247 96.8
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 2.9e-82 309.3 200 77.0
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 6.4e-82 308.1 195 80.0
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 5.4e-81 305.1 183 82.5
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 1.2e-80 303.9 184 80.4
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 6.0e-80 301.6 197 77.7
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 1.7e-79 300.1 182 81.3
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 2.3e-79 299.7 182 79.7
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 3.0e-79 299.3 248 67.3
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 3.9e-79 298.9 169 84.6
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 3.9e-79 298.9 193 76.7
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 5.0e-79 298.5 175 80.0
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 5.0e-79 298.5 182 79.1
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 5.0e-79 298.5 250 62.8
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 6.6e-79 298.1 249 65.1
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 1.5e-78 297.0 190 76.8
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 1.9e-78 296.6 241 66.4
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 1.9e-78 296.6 199 73.9
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 2.5e-78 296.2 197 74.1
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 3.3e-78 295.8 180 79.4
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 3.3e-78 295.8 190 76.8
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 5.6e-78 295.0 195 76.4
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 5.6e-78 295.0 198 75.8
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 1.2e-77 293.9 185 77.8
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 1.6e-77 293.5 173 80.9
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 1.6e-77 293.5 195 75.9
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 2.8e-77 292.7 248 63.7
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 2.8e-77 292.7 185 76.8
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 2.8e-77 292.7 182 76.4
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 2.8e-77 292.7 182 76.4
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 2.8e-77 292.7 169 80.5
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 3.6e-77 292.4 180 77.8
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 3.6e-77 292.4 175 81.7
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 4.7e-77 292.0 241 67.6
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 4.7e-77 292.0 176 81.2
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 6.2e-77 291.6 186 78.5
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 1.1e-76 290.8 177 78.0
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 1.1e-76 290.8 205 71.2
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 1.4e-76 290.4 181 78.5
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 2.3e-76 289.7 183 74.9
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 2.3e-76 289.7 195 72.8
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 3.1e-76 289.3 181 79.6
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 3.1e-76 289.3 187 76.5
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 4.0e-76 288.9 182 76.4
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 6.8e-76 288.1 195 74.4
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 6.8e-76 288.1 193 74.1
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 6.8e-76 288.1 181 79.0
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 2.0e-75 286.6 187 74.9
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 2.6e-75 286.2 250 62.0
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 4.4e-75 285.4 204 70.6
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 5.8e-75 285.0 253 62.8
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 7.5e-75 284.6 193 73.1
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 7.5e-75 284.6 194 71.1
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 7.5e-75 284.6 192 73.4
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 1.3e-74 283.9 184 74.5
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 1.7e-74 283.5 176 78.4
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 1.7e-74 283.5 179 76.5
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 4.9e-74 282.0 182 74.7
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 6.4e-74 281.6 203 69.5
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 1.9e-73 280.0 247 62.3
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 2.4e-73 279.6 258 57.4
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 5.4e-73 278.5 224 67.4
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 9.2e-73 277.7 225 65.8
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 1.2e-72 277.3 198 71.7
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 1.2e-72 277.3 183 76.5
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 1.2e-72 277.3 228 65.4
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 4.6e-72 275.4 220 66.8
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 4.6e-72 275.4 251 62.2
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 4.6e-72 275.4 173 75.7
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 6.0e-72 275.0 248 58.9
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 1.3e-71 273.9 225 65.3
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 1.7e-71 273.5 173 80.3
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 2.3e-71 273.1 220 65.5
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 3.9e-71 272.3 225 64.9
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 3.9e-71 272.3 225 64.9
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 1.5e-70 270.4 225 63.6
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 1.5e-70 270.4 175 74.9
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 1.5e-70 270.4 175 74.9
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 2.5e-70 269.6 171 75.4
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 4.3e-70 268.9 178 76.4
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 4.3e-70 268.9 253 60.5
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 7.3e-70 268.1 249 58.6
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 1.4e-68 263.8 248 58.5
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 1.8e-68 263.5 202 68.3
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 2.3e-68 263.1 253 56.5
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 2.0e-67 260.0 192 68.8
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 5.8e-67 258.5 180 70.6
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 2.9e-66 256.1 248 56.0
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 5.4e-65 251.9 250 55.2
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 4.6e-64 248.8 198 62.1
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 1.3e-63 247.3 198 65.2
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 3.9e-63 245.7 206 66.0
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 1.1e-62 244.2 181 64.6
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 1.1e-62 244.2 181 64.6
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 2.5e-62 243.0 150 76.0
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 2.5e-62 243.0 172 69.2
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 4.7e-61 238.8 225 60.0
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.1e-60 237.7 227 58.1
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.1e-60 237.7 227 58.1
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 8.9e-60 234.6 177 62.7
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 8.9e-60 234.6 199 60.8
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 7.6e-59 231.5 169 65.1
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 7.8e-56 221.5 158 74.1
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 3.0e-55 219.5 138 75.4
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 6.2e-53 211.8 124 81.5
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 1.5e-51 207.2 136 78.7
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 9.9e-51 204.5 269 45.7
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 1.8e-44 183.7 132 67.4
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 1.8e-44 183.7 120 72.5
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 2.4e-41 173.3 124 70.2
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 2.6e-35 153.3 99 76.8
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 4.2e-25 119.4 208 38.5
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 1.9e-22 110.5 95 67.4
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 4.3e-22 109.4 176 35.2
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 1.8e-15 87.4 175 33.7
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 1.2e-08 64.7 57 54.4
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 2.3e-07 60.5 152 28.9
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 8.8e-07 58.5 153 27.5


User provided reference genes

Program Settings