Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO135G0191 Papaver somniferum HOM05D003929 ORTHO05D004499 1.0e-100 370.2 201 100.0
PSO832G4520 Papaver somniferum HOM05D003929 ORTHO05D004499 2.3e-63 246.1 198 70.7
PSO063G6021 Papaver somniferum HOM05D003929 ORTHO05D004499 2.9e-63 245.7 198 70.7
Aa31LG11G880 Aethionema arabicum HOM05D003929 ORTHO05D004499 2.8e-37 159.5 196 51.0
BraA06t25903Z Brassica rapa HOM05D003929 ORTHO05D004499 2.3e-36 156.4 209 48.8
Glyma.05G037400 Glycine max HOM05D003929 ORTHO05D004499 2.3e-36 156.4 191 52.9
QL10p011722 Quercus lobata HOM05D003929 ORTHO05D004499 2.3e-36 156.4 190 53.2
Nn1g01975 Nelumbo nucifera HOM05D003929 ORTHO05D004499 3.1e-36 156.0 190 52.6
Aqoxy3G02955 Aquilegia oxysepala HOM05D003929 ORTHO05D004499 5.2e-36 155.2 210 51.9
BcaC01g02523 Brassica carinata HOM05D003929 ORTHO05D004499 6.8e-36 154.8 205 48.8
C03p63930 Brassica napus HOM05D003929 ORTHO05D004499 6.8e-36 154.8 205 48.8
BolC3t18647H Brassica oleracea HOM05D003929 ORTHO05D004499 6.8e-36 154.8 205 48.8
Sp2g25960 Schrenkiella parvula HOM05D003929 ORTHO05D004499 1.2e-35 154.1 193 50.8
A06p29570 Brassica napus HOM05D003929 ORTHO05D004499 1.5e-35 153.7 209 47.8
BolC9t53798H Brassica oleracea HOM05D003929 ORTHO05D004499 2.0e-35 153.3 210 51.4
BcaC04g23392 Brassica carinata HOM05D003929 ORTHO05D004499 2.6e-35 152.9 209 50.7
C09p08860 Brassica napus HOM05D003929 ORTHO05D004499 2.6e-35 152.9 209 50.7
CARHR276590 Cardamine hirsuta HOM05D003929 ORTHO05D004499 2.6e-35 152.9 214 49.1
GSVIVG01007750001 Vitis vinifera HOM05D003929 ORTHO05D004499 3.4e-35 152.5 192 52.1
A09p07860 Brassica napus HOM05D003929 ORTHO05D004499 4.4e-35 152.1 203 49.3
Lj5C124G9 Lonicera japonica HOM05D003929 ORTHO05D004499 4.4e-35 152.1 194 49.5
Thhalv10004017m.g Eutrema salsugineum HOM05D003929 ORTHO05D004499 7.5e-35 151.4 195 49.7
BraA09t36437Z Brassica rapa HOM05D003929 ORTHO05D004499 1.3e-34 150.6 187 50.8
BcaB02g09694 Brassica carinata HOM05D003929 ORTHO05D004499 1.7e-34 150.2 194 51.0
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 1.7e-34 150.2 193 51.8
TAR374G1605 Trochodendron aralioides HOM05D003929 ORTHO05D004499 2.9e-34 149.4 153 55.6
Oeu024692.2 Olea europaea HOM05D003929 ORTHO05D004499 4.9e-34 148.7 159 55.3
SGA_v2.0_scaffold90G27941 Striga asiatica HOM05D003929 ORTHO05D004499 4.9e-34 148.7 180 51.7
Glyma.06G182600 Glycine max HOM05D003929 ORTHO05D004499 6.4e-34 148.3 191 52.4
AL8G39770 Arabidopsis lyrata HOM05D003929 ORTHO05D004499 8.3e-34 147.9 192 50.0
Carub.0008s2353 Capsella rubella HOM05D003929 ORTHO05D004499 8.3e-34 147.9 192 50.0
TWI39G0937 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 8.3e-34 147.9 191 51.8
CsaV3_1G001520 Cucumis sativus L. HOM05D003929 ORTHO05D004499 1.1e-33 147.5 165 53.3
AT5G62810 Arabidopsis thaliana HOM05D003929 ORTHO05D004499 1.4e-33 147.1 192 50.5
TPR.G37553 Trifolium pratense HOM05D003929 ORTHO05D004499 1.4e-33 147.1 191 51.3
TAR622G0564 Trochodendron aralioides HOM05D003929 ORTHO05D004499 1.4e-33 147.1 171 51.5
Cc04_g14000 Coffea canephora HOM05D003929 ORTHO05D004499 3.2e-33 146.0 191 49.7
Gohir.A12G274000 Gossypium hirsutum HOM05D003929 ORTHO05D004499 3.2e-33 146.0 179 52.0
Gohir.D12G274700 Gossypium hirsutum HOM05D003929 ORTHO05D004499 3.2e-33 146.0 179 52.0
Gorai.008G295200 Gossypium raimondii HOM05D003929 ORTHO05D004499 3.2e-33 146.0 179 52.0
TWI14G0242 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 5.4e-33 145.2 173 53.8
CSS0017959 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 9.2e-33 144.4 155 52.9
Hma1.2p1_0000F.1_g000890 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 1.2e-32 144.1 164 53.7
Potri.015G076100 Populus trichocarpa HOM05D003929 ORTHO05D004499 1.2e-32 144.1 194 49.5
MELO3C026291.2 Cucumis melo HOM05D003929 ORTHO05D004499 1.6e-32 143.7 164 53.0
TWI31G0970 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 1.6e-32 143.7 191 51.3
Migut.I00015 Erythranthe guttata HOM05D003929 ORTHO05D004499 2.1e-32 143.3 197 49.2
Rhsim08G0171800 Rhododendron simsii HOM05D003929 ORTHO05D004499 2.1e-32 143.3 160 54.4
SalBow5G2324 Salvia bowleyana HOM05D003929 ORTHO05D004499 2.1e-32 143.3 192 49.5
THA.LOC104821459 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 2.1e-32 143.3 195 47.2
VMungo1309G0717 Vigna mungo HOM05D003929 ORTHO05D004499 2.7e-32 142.9 191 49.2
CAN.G628.79 Capsicum annuum HOM05D003929 ORTHO05D004499 3.5e-32 142.5 192 50.0
Ciclev10024320m.g Citrus clementina HOM05D003929 ORTHO05D004499 4.6e-32 142.1 154 55.8
Psat4g057880 Pisum sativum HOM05D003929 ORTHO05D004499 4.6e-32 142.1 191 49.7
Dinv20657 Davidia involucrata HOM05D003929 ORTHO05D004499 7.8e-32 141.4 195 48.2
Hund09434 Selenicereus undatus HOM05D003929 ORTHO05D004499 7.8e-32 141.4 194 48.5
AUR62030967 Chenopodium quinoa HOM05D003929 ORTHO05D004499 1.0e-31 141.0 174 48.9
Thecc.03G012300 Theobroma cacao HOM05D003929 ORTHO05D004499 1.3e-31 140.6 186 48.4
RcHm_v2.0_Chr7g0193581 Rosa chinensis HOM05D003929 ORTHO05D004499 2.3e-31 139.8 191 50.8
ClCG06G017000 Citrullus lanatus HOM05D003929 ORTHO05D004499 3.0e-31 139.4 165 52.1
DCAR_026132 Daucus carota HOM05D003929 ORTHO05D004499 3.0e-31 139.4 211 49.8
Manes.14G066000 Manihot esculenta HOM05D003929 ORTHO05D004499 3.0e-31 139.4 154 53.9
Sopen03g033430 Solanum pennellii HOM05D003929 ORTHO05D004499 3.0e-31 139.4 209 46.4
Prupe.5G174100 Prunus persica HOM05D003929 ORTHO05D004499 3.9e-31 139.0 202 48.0
PGR083G1389 Punica granatum HOM05D003929 ORTHO05D004499 3.9e-31 139.0 191 48.7
AUR62008214 Chenopodium quinoa HOM05D003929 ORTHO05D004499 5.1e-31 138.7 165 50.3
CDE05G2632 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 6.6e-31 138.3 188 50.0
Manes.06G104600 Manihot esculenta HOM05D003929 ORTHO05D004499 6.6e-31 138.3 171 49.7
Potri.012G080800 Populus trichocarpa HOM05D003929 ORTHO05D004499 6.6e-31 138.3 194 46.9
vmacro19383 Vaccinium macrocarpon HOM05D003929 ORTHO05D004499 6.6e-31 138.3 144 52.8
CiPaw.11G026500 Carya illinoinensis HOM05D003929 ORTHO05D004499 8.6e-31 137.9 192 49.5
Duzib068G1333 Durio zibethinus HOM05D003929 ORTHO05D004499 1.1e-30 137.5 195 48.7
Hma1.2p1_0176F.1_g077430 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 1.1e-30 137.5 168 51.2
Phvul.009G178800 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 1.1e-30 137.5 191 48.2
CSS0023375 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 1.5e-30 137.1 155 51.6
Cpa.g.sc770.1 Carica papaya HOM05D003929 ORTHO05D004499 1.5e-30 137.1 193 49.7
ECA232G3264 Erigeron canadensis HOM05D003929 ORTHO05D004499 1.5e-30 137.1 193 47.7
Dinv02898 Davidia involucrata HOM05D003929 ORTHO05D004499 1.9e-30 136.7 157 50.3
Medtr4g106880 Medicago truncatula HOM05D003929 ORTHO05D004499 3.3e-30 136.0 155 52.9
Solyc03g114330.3 Solanum lycopersicum HOM05D003929 ORTHO05D004499 3.3e-30 136.0 209 45.5
Atru.chr9.2475 Acer truncatum HOM05D003929 ORTHO05D004499 4.3e-30 135.6 193 48.7
Ca_21916_v3 Cicer arietinum L. HOM05D003929 ORTHO05D004499 4.3e-30 135.6 159 52.2
HanXRQChr16g0504021 Helianthus annuus HOM05D003929 ORTHO05D004499 5.6e-30 135.2 200 45.5
Nitab4.5_0001017g0080 Nicotiana tabacum HOM05D003929 ORTHO05D004499 5.6e-30 135.2 192 46.9
Sc04g0001820 Simmondsia chinensis HOM05D003929 ORTHO05D004499 5.6e-30 135.2 190 46.8
PGSC0003DMG400027090 Solanum tuberosum HOM05D003929 ORTHO05D004499 7.3e-30 134.8 194 48.5
Nitab4.5_0009783g0030 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.2e-29 134.0 194 46.9
Sopen06g027750 Solanum pennellii HOM05D003929 ORTHO05D004499 1.2e-29 134.0 194 48.5
THA.LOC104818232 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 1.2e-29 134.0 196 45.9
VMungo1215G1851 Vigna mungo HOM05D003929 ORTHO05D004499 1.2e-29 134.0 169 51.5
MSTRG.11449 Avicennia marina HOM05D003929 ORTHO05D004499 1.6e-29 133.7 156 49.4
CAN.G781.12 Capsicum annuum HOM05D003929 ORTHO05D004499 1.6e-29 133.7 192 49.0
Duzib205G0135 Durio zibethinus HOM05D003929 ORTHO05D004499 1.6e-29 133.7 196 48.0
SEGI_11105 Sequoiadendron giganteum HOM05D003929 ORTHO05D004499 1.6e-29 133.7 186 46.2
CANSAT80G0843 Cannabis sativa HOM05D003929 ORTHO05D004499 2.8e-29 132.9 150 53.3
Lalb_Chr11g0071231 Lupinus albus HOM05D003929 ORTHO05D004499 4.7e-29 132.1 188 48.9
Migut.D01928 Erythranthe guttata HOM05D003929 ORTHO05D004499 6.2e-29 131.7 192 48.4
Oeu016382.1 Olea europaea HOM05D003929 ORTHO05D004499 6.2e-29 131.7 192 46.4
Eucgr.B00317 Eucalyptus grandis HOM05D003929 ORTHO05D004499 8.1e-29 131.3 196 45.9
FAN18G3294 Fragaria x ananassa HOM05D003929 ORTHO05D004499 8.1e-29 131.3 194 48.5
Peaxi162Scf00017g02914 Petunia axillaris HOM05D003929 ORTHO05D004499 8.1e-29 131.3 195 49.2
Solyc06g071470.4 Solanum lycopersicum HOM05D003929 ORTHO05D004499 8.1e-29 131.3 194 47.9
Lsat_1_v5_gn_4_75281 Lactuca sativa HOM05D003929 ORTHO05D004499 1.8e-28 130.2 201 45.3
CiPaw.12G026400 Carya illinoinensis HOM05D003929 ORTHO05D004499 2.4e-28 129.8 156 50.6
FAN13G1321 Fragaria x ananassa HOM05D003929 ORTHO05D004499 2.4e-28 129.8 194 47.9
FvH4_5g05290 Fragaria vesca HOM05D003929 ORTHO05D004499 3.1e-28 129.4 194 47.9
EL10Ac5g10751 Beta vulgaris HOM05D003929 ORTHO05D004499 4.0e-28 129.0 187 46.0
CDE11G0983 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 4.0e-28 129.0 170 50.6
FAN08G2589 Fragaria x ananassa HOM05D003929 ORTHO05D004499 4.0e-28 129.0 194 47.9
Phvul.003G200200 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 5.2e-28 128.6 210 42.9
FAN18G3765 Fragaria x ananassa HOM05D003929 ORTHO05D004499 6.8e-28 128.3 190 47.4
Lj1g0005514 Lotus japonicus HOM05D003929 ORTHO05D004499 6.8e-28 128.3 191 47.6
Lalb_Chr07g0182721 Lupinus albus HOM05D003929 ORTHO05D004499 6.8e-28 128.3 191 46.6
Glyma.17G089700 Glycine max HOM05D003929 ORTHO05D004499 1.5e-27 127.1 191 46.6
Lj4g0023186 Lotus japonicus HOM05D003929 ORTHO05D004499 1.5e-27 127.1 153 51.0
Nitab4.5_0007719g0020 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.5e-27 127.1 176 46.0
Sed0022246 Sechium edule HOM05D003929 ORTHO05D004499 1.5e-27 127.1 194 45.4
ATR0730G040 Amborella trichopoda HOM05D003929 ORTHO05D004499 2.6e-27 126.3 187 45.5
arahy.Tifrunner.gnm1.ann1.W2DQVT Arachis hypogaea HOM05D003929 ORTHO05D004499 3.4e-27 125.9 155 51.6
FAN04G3176 Fragaria x ananassa HOM05D003929 ORTHO05D004499 3.4e-27 125.9 194 46.9
PGR044G0511 Punica granatum HOM05D003929 ORTHO05D004499 3.4e-27 125.9 193 45.1
Sed0009068 Sechium edule HOM05D003929 ORTHO05D004499 4.4e-27 125.6 194 44.8
COL.COLO4_30035 Corchorus olitorius HOM05D003929 ORTHO05D004499 9.9e-27 124.4 153 49.0
Lalb_Chr13g0297821 Lupinus albus HOM05D003929 ORTHO05D004499 1.7e-26 123.6 191 45.0
Haze_07467 Corylus avellana HOM05D003929 ORTHO05D004499 2.2e-26 123.2 216 44.0
MD14G1180600 Malus domestica HOM05D003929 ORTHO05D004499 2.2e-26 123.2 184 47.8
Peaxi162Scf00689g00222 Petunia axillaris HOM05D003929 ORTHO05D004499 2.9e-26 122.9 139 50.4
arahy.Tifrunner.gnm1.ann1.S02CG0 Arachis hypogaea HOM05D003929 ORTHO05D004499 1.4e-25 120.6 209 44.0
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 2.4e-25 119.8 141 49.6
HPP92_021833 Vanilla planifolia HOM05D003929 ORTHO05D004499 9.2e-25 117.9 174 45.4
arahy.Tifrunner.gnm1.ann1.R24CC5 Arachis hypogaea HOM05D003929 ORTHO05D004499 2.3e-23 113.2 209 42.6
MD06G1174100 Malus domestica HOM05D003929 ORTHO05D004499 5.1e-23 112.1 182 45.1
SalBow5G2758 Salvia bowleyana HOM05D003929 ORTHO05D004499 5.1e-23 112.1 126 51.6
Zm00001eb356320 Zea mays HOM05D003929 ORTHO05D004499 1.6e-21 107.1 185 45.9
Cfa019114 Carpinus fangiana HOM05D003929 ORTHO05D004499 3.6e-21 105.9 221 41.2
Mapoly0102s0017 Marchantia polymorpha HOM05D003929 ORTHO05D004499 3.6e-21 105.9 175 43.4
Thecc.02G250700 Theobroma cacao HOM05D003929 ORTHO05D004499 1.8e-20 103.6 182 43.4
Actinidia33066 Actinidia chinensis HOM05D003929 ORTHO05D004499 6.9e-20 101.7 121 51.2
Os05g0101200 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 4.4e-19 99.0 180 42.8
Zm00001eb267680 Zea mays HOM05D003929 ORTHO05D004499 4.4e-19 99.0 181 44.8
Psat4g209200 Pisum sativum HOM05D003929 ORTHO05D004499 5.8e-19 98.6 187 41.7
Zm00001eb126680 Zea mays HOM05D003929 ORTHO05D004499 2.9e-18 96.3 181 39.2
Atru.chr11.2035 Acer truncatum HOM05D003929 ORTHO05D004499 3.8e-18 95.9 192 43.8
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 4.9e-18 95.5 184 41.8
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 3.2e-17 92.8 151 40.4
Nitab4.5_0000003g0590 Nicotiana tabacum HOM05D003929 ORTHO05D004499 4.2e-17 92.4 117 45.3
Os01g0107000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 3.0e-15 86.3 180 37.2
Pp3c15_21860 Physcomitrium patens HOM05D003929 ORTHO05D004499 3.0e-15 86.3 182 35.2
Gohir.D02G162200 Gossypium hirsutum HOM05D003929 ORTHO05D004499 8.7e-15 84.7 181 42.0
Gorai.005G182200 Gossypium raimondii HOM05D003929 ORTHO05D004499 8.7e-15 84.7 181 42.0
SHI17030 Sapria himalayana HOM05D003929 ORTHO05D004499 8.7e-15 84.7 57 66.7
Gohir.A03G139300 Gossypium hirsutum HOM05D003929 ORTHO05D004499 3.3e-14 82.8 184 40.2
unitig_749.g13474 Utricularia gibba HOM05D003929 ORTHO05D004499 3.3e-14 82.8 186 34.4
AagrBONN_evm.TU.Sc2ySwM_117.2261 Anthoceros agrestis HOM05D003929 ORTHO05D004499 1.6e-13 80.5 144 36.1
Pp3c9_20380 Physcomitrium patens HOM05D003929 ORTHO05D004499 2.1e-13 80.1 175 33.7
CBR_g3508 Chara braunii HOM05D003929 ORTHO05D004499 2.4e-12 76.6 216 33.3
Hund02741 Selenicereus undatus HOM05D003929 ORTHO05D004499 5.3e-12 75.5 117 45.3
CBR_g10793 Chara braunii HOM05D027206 ORTHO05D004499 4.9e-10 68.9 49 65.3
FAN24G3310 Fragaria x ananassa HOM05D003929 ORTHO05D004499 3.2e-09 66.2 106 43.4
Lj9A449G50 Lonicera japonica HOM05D003929 ORTHO05D004499 7.1e-09 65.1 115 45.2
Cre10.g454025 Chlamydomonas reinhardtii HOM05D003929 ORTHO05D004499 5.1e-07 58.9 59 50.8
SHI17029 Sapria himalayana HOM05D003929 ORTHO05D004499 1.5e-06 57.4 101 43.6
Zm00001eb296750 Zea mays HOM05D003929 ORTHO05D004499 1.9e-06 57.0 55 52.7
Actinidia19318 Actinidia chinensis HOM05D003929 ORTHO05D004499 9.6e-06 54.7 98 43.9


User provided reference genes

Program Settings