Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO133G0107 Papaver somniferum HOM05D007703 ORTHO05D009731 8.8e-33 143.3 86 100.0
arahy.Tifrunner.gnm1.ann1.0YA8SQ Arachis hypogaea HOM05D007703 ORTHO05D009731 2.9e-20 101.7 59 78.0
arahy.Tifrunner.gnm1.ann1.DJB4SG Arachis hypogaea HOM05D007703 ORTHO05D009731 2.9e-20 101.7 59 78.0
TPR.G1060 Trifolium pratense HOM05D007703 ORTHO05D009731 3.8e-20 101.3 86 60.5
Glyma.13G087000 Glycine max HOM05D007703 ORTHO05D009731 1.5e-19 99.4 86 59.3
Glyma.14G169200 Glycine max HOM05D007703 ORTHO05D009731 1.5e-19 99.4 86 59.3
Medtr5g061840 Medicago truncatula HOM05D007703 ORTHO05D009731 2.5e-19 98.6 84 61.9
Lalb_Chr04g0253231 Lupinus albus HOM05D007703 ORTHO05D009731 7.2e-19 97.1 86 60.5
Psat0s3920g0040 Pisum sativum HOM05D007703 ORTHO05D009731 7.2e-19 97.1 59 72.9
Lj1g0023708 Lotus japonicus HOM05D007703 ORTHO05D009731 1.2e-18 96.3 86 55.8
GSVIVG01008983001 Vitis vinifera HOM05D007703 ORTHO05D009731 3.6e-18 94.7 86 57.0
Aqoxy6G00561 Aquilegia oxysepala HOM05D007703 ORTHO05D009731 4.7e-18 94.4 86 57.0
Gohir.D06G040000 Gossypium hirsutum HOM05D007703 ORTHO05D009731 4.7e-18 94.4 86 55.8
Gorai.010G044500 Gossypium raimondii HOM05D007703 ORTHO05D009731 4.7e-18 94.4 86 55.8
Ciclev10003047m.g Citrus clementina HOM05D007703 ORTHO05D009731 8.0e-18 93.6 56 76.8
Gohir.A06G038300 Gossypium hirsutum HOM05D007703 ORTHO05D009731 8.0e-18 93.6 86 57.0
Phvul.008G170600 Phaseolus vulgaris HOM05D007703 ORTHO05D009731 8.0e-18 93.6 86 54.7
Potri.005G167200 Populus trichocarpa HOM05D007703 ORTHO05D009731 8.0e-18 93.6 85 58.8
Duzib116G0261 Durio zibethinus HOM05D007703 ORTHO05D009731 1.4e-17 92.8 58 72.4
Thecc.08G112500 Theobroma cacao HOM05D007703 ORTHO05D009731 1.8e-17 92.4 86 55.8
Cpa.g.sc66.97 Carica papaya HOM05D007703 ORTHO05D009731 3.0e-17 91.7 59 69.5
PGR042G2694 Punica granatum HOM05D007703 ORTHO05D009731 3.0e-17 91.7 58 72.4
Atru.chr13.1271 Acer truncatum HOM05D007703 ORTHO05D009731 4.0e-17 91.3 86 57.0
Hma1.2p1_0120F.1_g057000 Hydrangea macrophylla HOM05D007703 ORTHO05D009731 5.2e-17 90.9 88 68.2
PGSC0003DMG400008548 Solanum tuberosum HOM05D007703 ORTHO05D009731 5.2e-17 90.9 58 75.9
MSTRG.24946 Avicennia marina HOM05D007703 ORTHO05D009731 6.8e-17 90.5 86 54.7
CANSAT25G3270 Cannabis sativa HOM05D007703 ORTHO05D009731 6.8e-17 90.5 86 55.8
CiPaw.05G232600 Carya illinoinensis HOM05D007703 ORTHO05D009731 6.8e-17 90.5 59 72.9
Ca_05260_v3 Cicer arietinum L. HOM05D007703 ORTHO05D009731 6.8e-17 90.5 83 57.8
COL.COLO4_16476 Corchorus olitorius HOM05D007703 ORTHO05D009731 8.8e-17 90.1 86 53.5
Manes.02G156200 Manihot esculenta HOM05D007703 ORTHO05D009731 8.8e-17 90.1 58 70.7
Nn1g05271 Nelumbo nucifera HOM05D007703 ORTHO05D009731 8.8e-17 90.1 86 57.0
QL12p035855 Quercus lobata HOM05D007703 ORTHO05D009731 1.2e-16 89.7 57 71.9
Eucgr.F00482 Eucalyptus grandis HOM05D007703 ORTHO05D009731 2.0e-16 89.0 89 56.2
Sopen12g029570 Solanum pennellii HOM05D007703 ORTHO05D009731 2.0e-16 89.0 58 72.4
Sabra05G0127000 Salix brachista HOM05D007703 ORTHO05D009731 2.6e-16 88.6 58 69.0
Aa31LG7G6100 Aethionema arabicum HOM05D007703 ORTHO05D009731 5.7e-16 87.4 59 69.5
CsaV3_5G023730 Cucumis sativus L. HOM05D007703 ORTHO05D009731 5.7e-16 87.4 86 52.3
Prupe.1G511400 Prunus persica HOM05D007703 ORTHO05D009731 7.5e-16 87.0 86 53.5
BcaC05g26138 Brassica carinata HOM05D007703 ORTHO05D009731 1.3e-15 86.3 56 66.1
C05p21240 Brassica napus HOM05D007703 ORTHO05D009731 1.3e-15 86.3 56 66.1
BolC5t30820H Brassica oleracea HOM05D007703 ORTHO05D009731 1.3e-15 86.3 56 66.1
MELO3C022803.2 Cucumis melo HOM05D007703 ORTHO05D009731 1.3e-15 86.3 58 65.5
RcHm_v2.0_Chr7g0240051 Rosa chinensis HOM05D007703 ORTHO05D009731 1.3e-15 86.3 59 67.8
Sc20g0003040 Simmondsia chinensis HOM05D007703 ORTHO05D009731 1.3e-15 86.3 59 67.8
FvH4_5g38090 Fragaria vesca HOM05D007703 ORTHO05D009731 1.7e-15 85.9 59 67.8
Solyc12g056910.2 Solanum lycopersicum HOM05D007703 ORTHO05D009731 2.2e-15 85.5 58 69.0
CDE10G0679 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 2.8e-15 85.1 59 64.4
AT1G22140 Arabidopsis thaliana HOM05D007703 ORTHO05D009731 3.7e-15 84.7 59 64.4
TAR628G1160 Trochodendron aralioides HOM05D007703 ORTHO05D009731 3.7e-15 84.7 86 59.3
Cc10_g05880 Coffea canephora HOM05D007703 ORTHO05D009731 4.8e-15 84.3 86 54.7
Nitab4.5_0002566g0010 Nicotiana tabacum HOM05D007703 ORTHO05D009731 6.3e-15 84.0 58 67.2
SalBow7G3803 Salvia bowleyana HOM05D007703 ORTHO05D009731 6.3e-15 84.0 86 51.2
HPP92_019111 Vanilla planifolia HOM05D007703 ORTHO05D009731 6.3e-15 84.0 58 67.2
CARHR022490 Cardamine hirsuta HOM05D007703 ORTHO05D009731 8.3e-15 83.6 59 62.7
FAN13G1213 Fragaria x ananassa HOM05D007703 ORTHO05D009731 8.3e-15 83.6 59 66.1
Peaxi162Scf00160g01521 Petunia axillaris HOM05D007703 ORTHO05D009731 8.3e-15 83.6 86 55.8
BcaB07g32233 Brassica carinata HOM05D007703 ORTHO05D009731 1.1e-14 83.2 56 64.3
FAN04G3187 Fragaria x ananassa HOM05D007703 ORTHO05D009731 1.1e-14 83.2 59 66.1
Nitab4.5_0000425g0040 Nicotiana tabacum HOM05D007703 ORTHO05D009731 1.4e-14 82.8 58 65.5
Sed0022194 Sechium edule HOM05D007703 ORTHO05D009731 1.4e-14 82.8 58 58.6
A09p42620 Brassica napus HOM05D007703 ORTHO05D009731 2.4e-14 82.0 56 62.5
BraA09t39737Z Brassica rapa HOM05D007703 ORTHO05D009731 2.4e-14 82.0 56 62.5
CAN.G144.17 Capsicum annuum HOM05D007703 ORTHO05D009731 2.4e-14 82.0 53 73.6
AUR62034365 Chenopodium quinoa HOM05D007703 ORTHO05D009731 2.4e-14 82.0 59 64.4
Sp1g19640 Schrenkiella parvula HOM05D007703 ORTHO05D009731 2.4e-14 82.0 59 62.7
Sed0012287 Sechium edule HOM05D007703 ORTHO05D009731 2.4e-14 82.0 58 60.3
AL1G35580 Arabidopsis lyrata HOM05D007703 ORTHO05D009731 3.1e-14 81.6 59 61.0
Thhalv10009245m.g Eutrema salsugineum HOM05D007703 ORTHO05D009731 3.1e-14 81.6 59 59.3
AUR62022343 Chenopodium quinoa HOM05D007703 ORTHO05D009731 5.4e-14 80.9 59 62.7
vmacro21226 Vaccinium macrocarpon HOM05D007703 ORTHO05D009731 5.4e-14 80.9 86 53.5
Carub.0001s2169 Capsella rubella HOM05D007703 ORTHO05D009731 9.1e-14 80.1 59 61.0
HanXRQChr05g0144121 Helianthus annuus HOM05D007703 ORTHO05D009731 9.1e-14 80.1 59 62.7
Hund26653 Selenicereus undatus HOM05D007703 ORTHO05D009731 9.1e-14 80.1 86 51.2
ECA232G3100 Erigeron canadensis HOM05D007703 ORTHO05D009731 1.2e-13 79.7 58 63.8
Lsat_1_v5_gn_9_44720 Lactuca sativa HOM05D007703 ORTHO05D009731 1.6e-13 79.3 55 63.6
TWI56G0976 Tripterygium wilfordii HOM05D007703 ORTHO05D009731 2.0e-13 79.0 86 51.2
Zm00001eb018670 Zea mays HOM05D007703 ORTHO05D009731 3.5e-13 78.2 58 62.1
Os03g0385301 Oryza sativa ssp. japonica HOM05D007703 ORTHO05D009731 4.5e-13 77.8 58 60.3
RcHm_v2.0_Chr2g0097791 Rosa chinensis HOM05D007703 ORTHO05D009731 1.7e-12 75.9 54 61.1
SGA_v2.0_scaffold48G18018 Striga asiatica HOM05D007703 ORTHO05D009731 1.1e-11 73.2 101 43.6
SEGI_17524 Sequoiadendron giganteum HOM05D007703 ORTHO05D009731 1.9e-11 72.4 58 56.9
EL10Ac1g01693 Beta vulgaris HOM05D007703 ORTHO05D009731 2.5e-11 72.0 51 64.7
Pp3c13_8980 Physcomitrium patens HOM05D007703 ORTHO05D009731 2.5e-11 72.0 57 56.1
ATR0564G384 Amborella trichopoda HOM05D007703 ORTHO05D009731 7.2e-11 70.5 58 55.2
ClCG03G008950 Citrullus lanatus HOM05D007703 ORTHO05D009731 3.6e-10 68.2 41 68.3
Mapoly0023s0123 Marchantia polymorpha HOM05D007703 ORTHO05D009731 4.7e-10 67.8 57 50.9
CDE10G0176 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 1.8e-09 65.9 40 72.5
Ah.05g168540 Amaranthus hybridus HOM05D007703 ORTHO05D009731 3.4e-08 61.6 46 60.9
Haze_00567 Corylus avellana HOM05D007703 ORTHO05D009731 2.8e-07 58.5 51 56.9
CSS0046153 Camellia sinensis var. sinensis HOM05D007703 ORTHO05D009731 1.4e-06 56.2 33 75.8
MBI02_g20368_MAGBIO Magnolia biondii HOM05D007703 ORTHO05D009731 4.1e-06 54.7 37 64.9


User provided reference genes

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