Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO133G0013 Papaver somniferum HOM05D005724 ORTHO05D006636 2.8e-264 915.2 649 100.0
PSO541G5859 Papaver somniferum HOM05D005724 ORTHO05D006636 3.7e-240 835.1 651 89.9
Aqoxy1G00698 Aquilegia oxysepala HOM05D005724 ORTHO05D006636 2.7e-118 430.3 667 46.2
TAR369G1103 Trochodendron aralioides HOM05D005724 ORTHO05D006636 8.2e-115 418.7 657 44.7
TAR623G1038 Trochodendron aralioides HOM05D005724 ORTHO05D006636 2.0e-113 414.1 659 44.3
Hma1.2p1_0023F.1_g015530 Hydrangea macrophylla HOM05D005724 ORTHO05D006636 1.2e-110 404.8 659 46.6
CSS0043370 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 6.9e-106 389.0 662 44.0
MBI13_g30854_MAGBIO Magnolia biondii HOM05D005724 ORTHO05D006636 3.8e-104 383.3 677 47.0
Actinidia03489 Actinidia chinensis HOM05D005724 ORTHO05D006636 5.0e-104 382.9 665 45.1
Dinv40379 Davidia involucrata HOM05D005724 ORTHO05D006636 7.9e-102 375.6 658 43.9
Sc16g0010460 Simmondsia chinensis HOM05D005724 ORTHO05D006636 4.4e-100 369.8 668 46.1
vmacro00813 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 1.3e-99 368.2 669 44.2
DCAR_014109 Daucus carota HOM05D005724 ORTHO05D006636 1.4e-98 364.8 665 41.5
PGR031G2108 Punica granatum HOM05D005724 ORTHO05D006636 3.5e-97 360.1 688 42.9
RhsimUnG0095000 Rhododendron simsii HOM05D005724 ORTHO05D006636 5.0e-96 356.3 676 48.8
Manes.13G004400 Manihot esculenta HOM05D005724 ORTHO05D006636 2.3e-93 347.4 659 44.2
Oeu040430.1 Olea europaea HOM05D005724 ORTHO05D006636 2.0e-92 344.4 684 39.2
CiPaw.07G081600 Carya illinoinensis HOM05D005724 ORTHO05D006636 1.7e-91 341.3 667 41.4
CSS0028855 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 2.2e-91 340.9 461 47.7
Ciclev10011241m.g Citrus clementina HOM05D005724 ORTHO05D006636 7.0e-90 335.9 676 42.0
Lalb_Chr18g0058031 Lupinus albus HOM05D005724 ORTHO05D006636 2.7e-89 334.0 681 38.6
CsaV3_4G029120 Cucumis sativus L. HOM05D005724 ORTHO05D006636 7.7e-89 332.4 658 41.6
TWI12G1283 Tripterygium wilfordii HOM05D005724 ORTHO05D006636 7.7e-89 332.4 669 38.3
Atru.chr12.1744 Acer truncatum HOM05D005724 ORTHO05D006636 1.3e-88 331.6 680 41.9
SGA_v2.0_scaffold52G18986 Striga asiatica HOM05D005724 ORTHO05D006636 1.7e-88 331.3 673 41.8
ATR0307G120 Amborella trichopoda HOM05D005724 ORTHO05D006636 3.8e-88 330.1 654 37.6
CDE09G0189 Ceratophyllum demersum HOM05D005724 ORTHO05D006636 3.2e-87 327.0 397 55.7
CAN.G219.49 Capsicum annuum HOM05D005724 ORTHO05D006636 9.4e-87 325.5 657 42.2
Nitab4.5_0000193g0130 Nicotiana tabacum HOM05D005724 ORTHO05D006636 1.6e-86 324.7 662 49.2
Nitab4.5_0003319g0010 Nicotiana tabacum HOM05D005724 ORTHO05D006636 8.0e-86 322.4 659 47.6
Sed0018672 Sechium edule HOM05D005724 ORTHO05D006636 1.0e-85 322.0 676 43.6
Eucgr.H01410 Eucalyptus grandis HOM05D005724 ORTHO05D006636 1.4e-85 321.6 664 41.7
Lj6g0014403 Lotus japonicus HOM05D005724 ORTHO05D006636 1.4e-85 321.6 708 42.2
SalBow2G0175 Salvia bowleyana HOM05D005724 ORTHO05D006636 2.3e-85 320.9 672 47.2
Sabra01G0096300 Salix brachista HOM05D005724 ORTHO05D006636 3.0e-85 320.5 646 39.2
VMungo0540G1901 Vigna mungo HOM05D005724 ORTHO05D006636 3.0e-85 320.5 697 35.0
Glyma.09G025000 Glycine max HOM05D005724 ORTHO05D006636 2.0e-84 317.8 690 43.5
Ah.06g195410 Amaranthus hybridus HOM05D005724 ORTHO05D006636 1.3e-83 315.1 664 45.5
Glyma.15G131100 Glycine max HOM05D005724 ORTHO05D006636 2.2e-83 314.3 689 40.3
Nn2g11375 Nelumbo nucifera HOM05D005724 ORTHO05D006636 2.2e-83 314.3 570 46.0
Prupe.6G362700 Prunus persica HOM05D005724 ORTHO05D006636 4.8e-83 313.2 685 50.9
PGSC0003DMG400013918 Solanum tuberosum HOM05D005724 ORTHO05D006636 1.1e-82 312.0 586 47.6
Sopen07g032510 Solanum pennellii HOM05D005724 ORTHO05D006636 1.4e-82 311.6 593 47.9
Ca_00849_v3 Cicer arietinum L. HOM05D005724 ORTHO05D006636 1.8e-82 311.2 610 34.6
Phvul.006G127600 Phaseolus vulgaris HOM05D005724 ORTHO05D006636 1.2e-81 308.5 696 36.9
Cfa006250 Carpinus fangiana HOM05D005724 ORTHO05D006636 1.6e-81 308.1 674 40.7
CANSAT35G0128 Cannabis sativa HOM05D005724 ORTHO05D006636 2.7e-81 307.4 677 44.2
Solyc07g064350.3 Solanum lycopersicum HOM05D005724 ORTHO05D006636 1.0e-80 305.4 593 48.4
arahy.Tifrunner.gnm1.ann1.GIZW0B Arachis hypogaea HOM05D005724 ORTHO05D006636 2.2e-80 304.3 692 45.1
unitig_46.g18493 Utricularia gibba HOM05D005724 ORTHO05D006636 2.2e-80 304.3 671 37.1
Aa31LG8G10800 Aethionema arabicum HOM05D005724 ORTHO05D006636 2.9e-80 303.9 591 46.7
Psat0s1379g0200 Pisum sativum HOM05D005724 ORTHO05D006636 2.9e-80 303.9 637 34.4
Carub.0003s2445 Capsella rubella HOM05D005724 ORTHO05D006636 3.2e-79 300.4 650 42.6
TPR.G26364 Trifolium pratense HOM05D005724 ORTHO05D006636 4.2e-79 300.1 633 40.4
Peaxi162Scf00691g00055 Petunia axillaris HOM05D005724 ORTHO05D006636 9.5e-79 298.9 710 39.2
RcHm_v2.0_Chr3g0447651 Rosa chinensis HOM05D005724 ORTHO05D006636 1.2e-78 298.5 710 42.8
arahy.Tifrunner.gnm1.ann1.EBNE7V Arachis hypogaea HOM05D005724 ORTHO05D006636 3.6e-78 297.0 693 41.4
Migut.C01153 Erythranthe guttata HOM05D005724 ORTHO05D006636 3.6e-78 297.0 679 37.1
AL3G39270 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 6.1e-78 296.2 596 47.8
Thecc.05G190100 Theobroma cacao HOM05D005724 ORTHO05D006636 6.1e-78 296.2 688 41.9
Cc10_g09550 Coffea canephora HOM05D005724 ORTHO05D006636 1.0e-77 295.4 694 37.8
HanXRQChr16g0529541 Helianthus annuus HOM05D005724 ORTHO05D006636 2.3e-77 294.3 677 43.9
Lsat_1_v5_gn_4_15540 Lactuca sativa HOM05D005724 ORTHO05D006636 2.3e-77 294.3 648 41.4
Haze_04583 Corylus avellana HOM05D005724 ORTHO05D006636 8.8e-77 292.4 680 43.1
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 4.4e-76 290.0 660 42.9
ClCG09G009940 Citrullus lanatus HOM05D005724 ORTHO05D006636 5.7e-76 289.7 658 46.0
FvH4_6g00350 Fragaria vesca HOM05D005724 ORTHO05D006636 7.5e-76 289.3 685 43.9
THA.LOC104821618 Tarenaya hassleriana HOM05D005724 ORTHO05D006636 7.5e-76 289.3 588 45.7
QL10p055704 Quercus lobata HOM05D005724 ORTHO05D006636 9.8e-76 288.9 667 49.8
Gorai.004G263700 Gossypium raimondii HOM05D005724 ORTHO05D006636 1.3e-75 288.5 680 42.1
AT3G24080 Arabidopsis thaliana HOM05D005724 ORTHO05D006636 2.8e-75 287.3 592 44.6
QL10p055615 Quercus lobata HOM05D005724 ORTHO05D006636 3.7e-75 287.0 667 48.7
QL03p046485 Quercus lobata HOM05D005724 ORTHO05D006636 4.9e-75 286.6 669 46.0
MSTRG.1463 Avicennia marina HOM05D005724 ORTHO05D006636 1.8e-74 284.6 621 41.1
Medtr2g030390 Medicago truncatula HOM05D005724 ORTHO05D006636 1.3e-72 278.5 631 37.9
Potri.001G125200 Populus trichocarpa HOM05D005724 ORTHO05D006636 1.3e-72 278.5 658 35.9
Os05g0490000 Oryza sativa ssp. japonica HOM05D005724 ORTHO05D006636 2.9e-72 277.3 392 47.7
AL8G20560 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 3.8e-72 276.9 650 44.9
Gohir.D08G247200 Gossypium hirsutum HOM05D005724 ORTHO05D006636 1.1e-71 275.4 685 40.4
Duzib168G0454 Durio zibethinus HOM05D005724 ORTHO05D006636 4.3e-71 273.5 675 42.4
Gohir.A08G226800 Gossypium hirsutum HOM05D005724 ORTHO05D006636 1.2e-70 271.9 692 40.5
ECA234G3960 Erigeron canadensis HOM05D005724 ORTHO05D006636 6.1e-70 269.6 672 45.5
CARHR100150 Cardamine hirsuta HOM05D005724 ORTHO05D006636 1.0e-69 268.9 553 48.5
MELO3C000397.2 Cucumis melo HOM05D005724 ORTHO05D006636 6.8e-69 266.2 578 43.8
Lj2C388T1 Lonicera japonica HOM05D005724 ORTHO05D006636 1.2e-68 265.4 671 36.4
COL.COLO4_36609 Corchorus olitorius HOM05D005724 ORTHO05D006636 3.7e-67 260.4 670 34.6
AagrBONN_evm.TU.Sc2ySwM_228.2542 Anthoceros agrestis HOM05D005724 ORTHO05D006636 2.4e-66 257.7 684 35.7
Mapoly0029s0120 Marchantia polymorpha HOM05D005724 ORTHO05D006636 3.5e-65 253.8 687 33.6
Nitab4.5_0001290g0080 Nicotiana tabacum HOM05D005724 ORTHO05D006636 1.7e-64 251.5 656 40.1
Mapoly0032s0003 Marchantia polymorpha HOM05D005724 ORTHO05D006636 2.3e-64 251.1 686 33.1
MD12G1263700 Malus domestica HOM05D005724 ORTHO05D006636 3.0e-64 250.8 687 41.2
AUR62041171 Chenopodium quinoa HOM05D005724 ORTHO05D006636 5.0e-64 250.0 455 41.5
Sp3g21860 Schrenkiella parvula HOM05D005724 ORTHO05D006636 5.0e-64 250.0 428 50.2
SEGI_23235 Sequoiadendron giganteum HOM05D005724 ORTHO05D006636 3.6e-62 243.8 714 40.3
Oeu026139.1 Olea europaea HOM05D005724 ORTHO05D006636 4.7e-62 243.4 553 40.7
BcaB06g26592 Brassica carinata HOM05D005724 ORTHO05D006636 2.0e-60 238.0 631 40.6
BolC7t41765H Brassica oleracea HOM05D005724 ORTHO05D006636 4.4e-60 236.9 639 42.4
BcaC06g35627 Brassica carinata HOM05D005724 ORTHO05D006636 3.7e-59 233.8 455 44.8
C07p12790 Brassica napus HOM05D005724 ORTHO05D006636 4.9e-59 233.4 454 44.5
A07p08250 Brassica napus HOM05D005724 ORTHO05D006636 7.0e-58 229.6 454 43.6
CSS0001117 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 9.2e-58 229.2 329 46.2
BraA07t28608Z Brassica rapa HOM05D005724 ORTHO05D006636 1.6e-57 228.4 644 43.8
AUR62029295 Chenopodium quinoa HOM05D005724 ORTHO05D006636 1.6e-57 228.4 444 41.0
vmacro22819 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 1.6e-57 228.4 653 36.3
HPP92_010851 Vanilla planifolia HOM05D005724 ORTHO05D006636 1.7e-56 224.9 431 40.6
Pp3c2_10220 Physcomitrium patens HOM05D005724 ORTHO05D006636 1.9e-55 221.5 683 32.7
Zm00001eb227770 Zea mays HOM05D005724 ORTHO05D006636 2.3e-53 214.5 678 33.5
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.6e-52 211.1 455 38.2
Nitab4.5_0013479g0020 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.2e-51 208.0 594 38.0
SHI13708 Sapria himalayana HOM05D005724 ORTHO05D006636 1.6e-49 201.8 669 30.6
Glyma.13G144202 Glycine max HOM05D005724 ORTHO05D006636 1.3e-40 172.2 250 50.0
SMO118G0180 Selaginella moellendorffii HOM05D005724 ORTHO05D006636 3.0e-40 171.0 652 35.4
PSO339G2657 Papaver somniferum HOM05D005724 ORTHO05D006636 1.2e-36 159.1 133 84.2
Dinv27343 Davidia involucrata HOM05D005724 ORTHO05D006636 6.4e-35 153.3 199 47.2
Nitab4.5_0005621g0050 Nicotiana tabacum HOM05D005724 ORTHO05D006636 3.2e-34 151.0 324 35.8
Cre10.g441450 Chlamydomonas reinhardtii HOM05D005724 ORTHO05D006636 3.9e-32 144.1 417 36.2
CBR_g46717 Chara braunii HOM05D005724 ORTHO05D006636 4.8e-30 137.1 456 35.7
Dinv27342 Davidia involucrata HOM05D005724 ORTHO05D006636 6.9e-29 133.3 307 36.8
MCO14G354 Micromonas commoda HOM05D005724 ORTHO05D006636 9.0e-29 132.9 594 36.2
PRCOL_00003643 Prasinoderma coloniale HOM05D005724 ORTHO05D006636 4.5e-28 130.6 386 31.6
Peaxi162Scf00916g00115 Petunia axillaris HOM05D005724 ORTHO05D006636 5.4e-26 123.6 357 37.8
MD04G1246400 Malus domestica HOM05D005724 ORTHO05D006636 1.8e-21 108.6 104 53.8
AL8G20410 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 1.9e-18 98.6 93 54.8
Peaxi162Scf00916g00131 Petunia axillaris HOM05D005724 ORTHO05D006636 2.1e-17 95.1 159 42.1
Psat1g166960 Pisum sativum HOM05D005724 ORTHO05D006636 1.2e-12 79.3 219 32.0
MELO3C003738.2 Cucumis melo HOM05D005724 ORTHO05D006636 8.4e-11 73.2 103 49.5
MELO3C017820.2 Cucumis melo HOM05D005724 ORTHO05D006636 1.1e-10 72.8 103 50.5
Cpa.g.sc48.98 Carica papaya HOM05D005724 ORTHO05D006636 1.4e-10 72.4 142 44.4
Nitab4.5_0005621g0090 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.5e-10 71.6 103 51.5
AagrBONN_evm.TU.Sc2ySwM_344.5238 Anthoceros agrestis HOM05D005724 ORTHO05D006636 3.9e-08 64.3 544 26.3
MSTRG.22873 Avicennia marina HOM05D005724 ORTHO05D006636 1.3e-06 59.3 126 31.7


User provided reference genes

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