Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 1.2e-289 999.6 596 100.0
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 1.4e-280 969.5 566 97.2
PSO675G1450 Papaver somniferum HOM05D003426 ORTHO05D003816 5.9e-167 592.0 410 80.0
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.5e-40 172.2 521 32.2
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 2.2e-33 148.3 472 33.9
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 1.9e-32 145.2 462 33.3
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 2.5e-32 144.8 320 38.4
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 6.8e-30 136.7 213 40.8
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 2.2e-28 131.7 458 29.5
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 6.3e-28 130.2 459 29.2
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 2.9e-25 121.3 244 42.6
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 2.5e-24 118.2 503 28.2
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 3.2e-24 117.9 476 28.2
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 4.7e-23 114.0 486 31.1
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 1.4e-22 112.5 502 26.7
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 4.0e-22 110.9 594 27.3
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 9.8e-21 106.3 466 30.3
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 1.7e-20 105.5 466 30.7
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 2.8e-20 104.8 258 36.8
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 1.1e-19 102.8 516 26.7
Actinidia38316 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.4e-19 102.4 497 29.0
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 2.0e-18 98.6 466 27.5
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 2.7e-18 98.2 362 30.1
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 5.9e-18 97.1 259 38.6
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 5.9e-18 97.1 458 28.2
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 3.8e-17 94.4 279 29.4
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 5.0e-17 94.0 318 29.2
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 6.6e-17 93.6 464 29.3
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 6.6e-17 93.6 401 28.2
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 6.6e-17 93.6 470 27.0
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 8.6e-17 93.2 532 24.2
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 8.6e-17 93.2 496 25.8
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.9e-16 92.0 474 30.4
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 3.3e-16 91.3 344 30.8
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 4.3e-16 90.9 469 25.2
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 7.3e-16 90.1 514 30.5
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 9.5e-16 89.7 354 28.8
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 2.1e-15 88.6 171 38.0
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 2.1e-15 88.6 171 38.0
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 1.4e-14 85.9 449 26.7
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 5.2e-14 84.0 296 29.4
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 8.9e-14 83.2 310 31.0
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 1.2e-13 82.8 258 31.4
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 2.0e-13 82.0 461 23.6
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 2.6e-13 81.6 495 23.8
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 3.4e-13 81.3 452 30.5
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 4.4e-13 80.9 441 30.6
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 5.7e-13 80.5 488 27.9
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 9.8e-13 79.7 271 29.2
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.7e-12 79.0 509 26.1
Dinv17422 Davidia involucrata HOM05D003426 ORTHO05D003816 2.9e-12 78.2 226 31.4
vmacro06066 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 2.9e-12 78.2 217 33.2
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 4.9e-12 77.4 408 26.2
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 4.9e-12 77.4 521 23.4
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 6.4e-12 77.0 521 23.6
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 8.3e-12 76.6 165 34.5
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 1.1e-11 76.3 436 23.9
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 2.4e-11 75.1 317 26.8
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 3.2e-11 74.7 186 31.2
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 5.4e-11 73.9 523 24.1
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 7.0e-11 73.6 495 25.1
Actinidia01424 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.2e-10 72.8 171 43.9
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.2e-10 72.8 273 26.7
Rhsim02G0212600 Rhododendron simsii HOM05D003426 ORTHO05D003816 2.7e-10 71.6 213 31.9
GSVIVG01023627001 Vitis vinifera HOM05D003426 ORTHO05D003816 2.7e-10 71.6 73 53.4
FAN26G0769 Fragaria x ananassa HOM05D003426 ORTHO05D003816 3.5e-10 71.2 420 28.6
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 5.9e-10 70.5 392 30.4
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 5.9e-10 70.5 164 37.2
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 7.8e-10 70.1 73 50.7
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 1.7e-09 68.9 343 25.4
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 3.9e-09 67.8 155 38.1
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 5.0e-09 67.4 364 24.5
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 5.0e-09 67.4 274 27.0
CiPaw.16G108200 Carya illinoinensis HOM05D003426 ORTHO05D003816 6.6e-09 67.0 209 36.4
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 6.6e-09 67.0 292 34.2
FAN23G3106 Fragaria x ananassa HOM05D003426 ORTHO05D003816 1.1e-08 66.2 420 27.9
PSO675G7028 Papaver somniferum HOM05D003426 ORTHO05D003816 1.1e-08 66.2 209 30.1
FvH4_2g11450 Fragaria vesca HOM05D000650 ORTHO05D007302 4.3e-08 64.3 107 40.2
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 4.3e-08 64.3 69 50.7
TAR539G0001 Trochodendron aralioides HOM05D003426 ORTHO05D003816 5.6e-08 63.9 160 41.9
Actinidia10526 Actinidia chinensis HOM05D003426 ORTHO05D003816 9.5e-08 63.2 147 29.9
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 9.5e-08 63.2 236 27.1
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 1.2e-07 62.8 183 29.5
Psat6g228520 Pisum sativum HOM05D003426 ORTHO05D003816 1.2e-07 62.8 43 65.1
ClCG02G014420 Citrullus lanatus HOM05D003426 ORTHO05D003816 1.6e-07 62.4 245 27.8
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 1.6e-07 62.4 69 49.3
Phvul.010G050200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 1.6e-07 62.4 68 47.1
Rhsim02G0230700 Rhododendron simsii HOM05D000448 ORTHO05D000291 1.6e-07 62.4 86 46.5
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 2.8e-07 61.6 270 23.7
Rhsim11G0141300 Rhododendron simsii HOM05D000650 ORTHO05D007302 2.8e-07 61.6 82 41.5
arahy.Tifrunner.gnm1.ann1.N5DK6E Arachis hypogaea HOM05D003426 ORTHO05D003816 3.6e-07 61.2 282 25.5
Dinv08190 Davidia involucrata HOM05D003426 ORTHO05D003816 3.6e-07 61.2 441 25.2
AL4G14080 Arabidopsis lyrata HOM05D012895 ORTHO05D014428 4.7e-07 60.8 152 28.9
CSS0027727 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 4.7e-07 60.8 76 52.6
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 4.7e-07 60.8 76 44.7
FvH4_1g00800 Fragaria vesca HOM05D003426 ORTHO05D003816 6.2e-07 60.5 282 25.2
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 6.2e-07 60.5 69 47.8
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 6.2e-07 60.5 150 31.3
Hund02604 Selenicereus undatus HOM05D005220 ORTHO05D006082 6.2e-07 60.5 199 30.2
FAN28G0527 Fragaria x ananassa HOM05D003426 ORTHO05D003816 8.0e-07 60.1 282 25.2
Lj4g0006994 Lotus japonicus HOM05D003426 ORTHO05D003816 8.0e-07 60.1 245 26.5
Os06g0651300 Oryza sativa ssp. japonica HOM05D003426 ORTHO05D003816 8.0e-07 60.1 56 50.0
Psat4g009680 Pisum sativum HOM05D003426 ORTHO05D003816 8.0e-07 60.1 281 27.4
TWI56G0415 Tripterygium wilfordii HOM05D000650 ORTHO05D010020 8.0e-07 60.1 73 47.9
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 1.0e-06 59.7 517 24.0
SGA_v2.0_scaffold12G06013 Striga asiatica HOM05D003426 ORTHO05D003816 1.0e-06 59.7 89 33.7
SGA_v2.0_scaffold1435G53950 Striga asiatica HOM05D003426 ORTHO05D003816 1.0e-06 59.7 89 33.7
Thecc.02G127100 Theobroma cacao HOM05D000650 ORTHO05D007302 1.0e-06 59.7 96 39.6
Lalb_Chr13g0300811 Lupinus albus HOM05D003426 ORTHO05D003816 1.4e-06 59.3 350 22.3
QL09p018396 Quercus lobata HOM05D000650 ORTHO05D010020 1.4e-06 59.3 59 54.2
RcHm_v2.0_Chr2g0085511 Rosa chinensis HOM05D003426 ORTHO05D003816 1.4e-06 59.3 486 25.5
SGA_v2.0_scaffold83G26387 Striga asiatica HOM05D000650 ORTHO05D000735 1.4e-06 59.3 141 29.8
TPR.G30873 Trifolium pratense HOM05D000650 ORTHO05D010020 1.4e-06 59.3 55 54.5
Actinidia02402 Actinidia chinensis HOM05D000650 ORTHO05D007302 1.8e-06 58.9 125 35.2
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 1.8e-06 58.9 269 22.7
Lsat_1_v5_gn_5_90301 Lactuca sativa HOM05D003426 ORTHO05D003816 1.8e-06 58.9 256 26.2
SGA_v2.0_scaffold96G29076 Striga asiatica HOM05D003426 ORTHO05D003816 1.8e-06 58.9 147 29.3
vmacro01871 Vaccinium macrocarpon HOM05D000650 ORTHO05D007302 1.8e-06 58.9 40 65.0
Zm00001eb388770 Zea mays HOM05D003426 ORTHO05D003816 1.8e-06 58.9 55 52.7
ATR0580G137 Amborella trichopoda HOM05D003426 ORTHO05D003816 2.3e-06 58.5 165 27.9
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 2.3e-06 58.5 386 23.6
Rhsim11G0141100 Rhododendron simsii HOM05D000650 ORTHO05D007302 2.3e-06 58.5 80 42.5
Cpa.g.sc21.40 Carica papaya HOM05D000650 ORTHO05D010020 3.1e-06 58.2 99 37.4
ECA234G0256 Erigeron canadensis HOM05D003426 ORTHO05D003816 3.1e-06 58.2 239 29.7
Rhsim11G0141400 Rhododendron simsii HOM05D002143 ORTHO05D002260 3.1e-06 58.2 102 37.3
Rhsim11G0142600 Rhododendron simsii HOM05D002143 ORTHO05D338981 3.1e-06 58.2 74 41.9
Ah.12g060820 Amaranthus hybridus HOM05D016866 ORTHO05D003816 4.0e-06 57.8 97 41.2
SalBow1G0569 Salvia bowleyana HOM05D003426 ORTHO05D003816 4.0e-06 57.8 103 37.9
AUR62032422 Chenopodium quinoa HOM05D016866 ORTHO05D003816 5.2e-06 57.4 493 22.5
FAN20G2154 Fragaria x ananassa HOM05D003426 ORTHO05D007302 5.2e-06 57.4 136 36.8
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 5.2e-06 57.4 55 49.1
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 5.2e-06 57.4 129 31.8
Haze_01807 Corylus avellana HOM05D000650 ORTHO05D010020 6.8e-06 57.0 38 68.4
Glyma.02G205001 Glycine max HOM05D003426 ORTHO05D003816 6.8e-06 57.0 311 23.5
Aqoxy6G00817_Aqoxy6G00818 Aquilegia oxysepala HOM05D000650 ORTHO05D010020 8.9e-06 56.6 58 48.3
Glyma.17G072800 Glycine max HOM05D003426 ORTHO05D003816 8.9e-06 56.6 237 28.7
Gorai.005G226700 Gossypium raimondii HOM05D000650 ORTHO05D007302 8.9e-06 56.6 67 43.3
Nitab4.5_0000123g0610 Nicotiana tabacum HOM05D003426 ORTHO05D007302 8.9e-06 56.6 165 27.9
Psat4g010040 Pisum sativum HOM05D003426 ORTHO05D003816 8.9e-06 56.6 161 30.4
Rhsim11G0141200 Rhododendron simsii HOM05D000650 ORTHO05D007302 8.9e-06 56.6 61 50.8
RcHm_v2.0_Chr6g0270171 Rosa chinensis HOM05D000650 ORTHO05D007302 8.9e-06 56.6 81 39.5
Sc18g0002970 Simmondsia chinensis HOM05D003426 ORTHO05D003816 8.9e-06 56.6 271 26.6


User provided reference genes

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