Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 1.1e-50 203.0 102 100.0
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 3.3e-39 164.9 102 83.3
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 5.7e-39 164.1 100 80.0
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 2.8e-38 161.8 99 78.8
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 4.8e-38 161.0 100 80.0
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 8.2e-38 160.2 100 79.0
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 1.4e-37 159.5 99 77.8
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.4e-37 158.7 99 77.8
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 3.1e-37 158.3 100 77.0
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 5.3e-37 157.5 99 76.8
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 9.1e-37 156.8 99 75.8
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 9.1e-37 156.8 99 75.8
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 1.2e-36 156.4 99 75.8
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 1.2e-36 156.4 101 75.2
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 1.6e-36 156.0 99 76.8
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 3.5e-36 154.8 99 74.7
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 3.5e-36 154.8 98 76.5
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 3.5e-36 154.8 99 76.8
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 5.9e-36 154.1 99 74.7
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 7.7e-36 153.7 97 77.3
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 1.0e-35 153.3 99 74.7
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 1.3e-35 152.9 101 75.2
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 1.3e-35 152.9 97 76.3
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 1.7e-35 152.5 100 74.0
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 2.9e-35 151.8 100 72.0
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 2.9e-35 151.8 99 74.7
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 3.8e-35 151.4 100 72.0
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 3.8e-35 151.4 99 73.7
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 6.5e-35 150.6 99 73.7
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 8.5e-35 150.2 99 73.7
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 1.1e-34 149.8 98 72.4
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 1.5e-34 149.4 97 76.3
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 1.5e-34 149.4 99 72.7
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 2.5e-34 148.7 99 74.7
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 3.2e-34 148.3 100 72.0
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 4.2e-34 147.9 97 74.2
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 9.4e-34 146.7 89 80.9
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 9.4e-34 146.7 98 70.4
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 9.4e-34 146.7 98 70.4
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 1.2e-33 146.4 91 79.1
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 1.6e-33 146.0 93 77.4
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.6e-33 146.0 98 70.4
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 2.1e-33 145.6 99 69.7
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 2.1e-33 145.6 99 67.7
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 8.0e-33 143.7 100 72.0
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 8.0e-33 143.7 97 72.2
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 1.0e-32 143.3 98 71.4
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 2.3e-32 142.1 98 69.4
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 3.0e-32 141.7 99 69.7
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 4.0e-32 141.4 99 69.7
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 5.2e-32 141.0 91 74.7
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 8.8e-32 140.2 91 73.6
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 8.8e-32 140.2 98 68.4
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 8.8e-32 140.2 100 68.0
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 2.0e-31 139.0 91 73.6
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 2.0e-31 139.0 93 73.1
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 2.0e-31 139.0 99 67.7
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 4.4e-31 137.9 100 65.0
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 5.7e-31 137.5 98 68.4
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 5.7e-31 137.5 91 72.5
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 5.7e-31 137.5 99 66.7
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 7.5e-31 137.1 89 74.2
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 1.7e-30 136.0 91 71.4
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 1.7e-30 136.0 100 66.0
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 1.7e-30 136.0 100 66.0
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 2.2e-30 135.6 99 67.7
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 2.8e-30 135.2 89 73.0
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 3.7e-30 134.8 91 71.4
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 3.7e-30 134.8 99 64.6
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 8.3e-30 133.7 87 73.6
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 8.3e-30 133.7 87 73.6
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 1.1e-29 133.3 100 64.0
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 1.4e-29 132.9 99 64.6
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 1.8e-29 132.5 89 69.7
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 2.4e-29 132.1 76 85.5
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 2.4e-29 132.1 76 85.5
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 4.1e-29 131.3 89 70.8
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 5.4e-29 131.0 89 70.8
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 5.4e-29 131.0 99 63.6
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 5.4e-29 131.0 100 63.0
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 1.2e-28 129.8 91 68.1
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 1.2e-28 129.8 98 67.3
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 1.2e-28 129.8 101 64.4
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 1.6e-28 129.4 89 69.7
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 1.6e-28 129.4 95 64.2
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 5.9e-28 127.5 100 59.0
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 5.9e-28 127.5 92 68.5
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 7.7e-28 127.1 93 68.8
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 2.3e-27 125.6 93 66.7
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 3.8e-27 124.8 95 64.2
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 6.5e-27 124.0 89 68.5
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 8.6e-27 123.6 80 75.0
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 8.6e-27 123.6 75 82.7
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 8.6e-27 123.6 92 66.3
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 1.5e-26 122.9 76 76.3
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 7.2e-26 120.6 76 76.3
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 2.8e-25 118.6 79 72.2
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 2.8e-25 118.6 76 75.0
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 4.0e-24 114.8 64 85.9
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 4.4e-23 111.3 87 65.5
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 7.5e-23 110.5 74 73.0
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 9.8e-23 110.2 102 56.9
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 1.7e-22 109.4 90 61.1
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 2.2e-22 109.0 74 71.6
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 2.8e-22 108.6 75 72.0
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 1.1e-21 106.7 78 70.5
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 1.3e-19 99.8 73 68.5
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 2.3e-19 99.0 64 78.1
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 8.0e-17 90.5 90 51.1
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 1.4e-16 89.7 78 57.7
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 3.0e-16 88.6 62 74.2
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 1.5e-15 86.3 104 49.0
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 9.8e-15 83.6 75 56.0
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 9.8e-15 83.6 86 50.0
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 2.2e-14 82.4 99 49.5
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 5.0e-11 71.2 87 44.8
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 3.3e-10 68.6 51 64.7
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 1.5e-07 59.7 37 73.0
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 5.8e-07 57.8 108 33.3


User provided reference genes

Program Settings