Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO104G0168 Papaver somniferum HOM05D017630 ORTHO05D003163 1.6e-121 439.5 231 100.0
PSO421G0048 Papaver somniferum HOM05D017630 ORTHO05D304139 2.0e-55 219.9 219 61.2
PSO135G0102 Papaver somniferum HOM05D017630 ORTHO05D303768 2.6e-23 113.2 127 55.1
PSO104G0166 Papaver somniferum HOM05D002729 ORTHO05D003163 3.4e-23 112.8 107 60.7
PSO104G0109 Papaver somniferum HOM05D002729 ORTHO05D003163 5.8e-23 112.1 76 76.3
PSO135G0951 Papaver somniferum HOM05D017630 ORTHO05D304829 5.8e-23 112.1 127 55.1
PSO104G0092 Papaver somniferum HOM05D002729 ORTHO05D003163 2.9e-22 109.8 171 41.5
PSO063G4288 Papaver somniferum HOM05D002729 ORTHO05D305335 4.6e-20 102.4 83 62.7
PSO170G3342 Papaver somniferum HOM05D002729 ORTHO05D305508 4.6e-20 102.4 83 62.7
PSO170G3466 Papaver somniferum HOM05D002729 ORTHO05D003163 5.1e-19 99.0 84 61.9
PSO063G2107 Papaver somniferum HOM05D005384 ORTHO05D006477 1.8e-16 90.5 58 75.9
PSO407G0363 Papaver somniferum HOM05D017630 ORTHO05D303227 1.4e-13 80.9 87 54.0
PSO017G4879 Papaver somniferum HOM05D002729 ORTHO05D003163 9.3e-13 78.2 83 47.0
PSO478G5186 Papaver somniferum HOM05D002729 ORTHO05D003163 9.3e-13 78.2 83 47.0
PSO724G0625 Papaver somniferum HOM05D005384 ORTHO05D006477 2.3e-11 73.6 58 62.1
Psat5g231000 Pisum sativum HOM05D002729 ORTHO05D003163 2.3e-11 73.6 113 36.3
TPR.G16696 Trifolium pratense HOM05D002729 ORTHO05D003163 3.0e-11 73.2 120 35.8
EL10Ac8g20265 Beta vulgaris HOM05D002729 ORTHO05D003163 1.1e-10 71.2 169 31.4
QL11p057171 Quercus lobata HOM05D002729 ORTHO05D003163 1.5e-10 70.9 74 50.0
QL11p057597 Quercus lobata HOM05D002729 ORTHO05D003163 1.5e-10 70.9 74 50.0
MSTRG.5230 Avicennia marina HOM05D002729 ORTHO05D003163 1.9e-10 70.5 75 48.0
ATR0796G047 Amborella trichopoda HOM05D002729 ORTHO05D003163 2.5e-10 70.1 157 31.2
Ca_14122_v3 Cicer arietinum L. HOM05D002729 ORTHO05D003163 2.5e-10 70.1 113 38.1
Dinv41997 Davidia involucrata HOM05D002729 ORTHO05D003163 2.5e-10 70.1 72 48.6
PGSC0003DMG400024167 Solanum tuberosum HOM05D002729 ORTHO05D003163 3.3e-10 69.7 87 43.7
Cc02_g22490 Coffea canephora HOM05D002729 ORTHO05D003163 5.7e-10 68.9 77 45.5
Actinidia26322 Actinidia chinensis HOM05D002729 ORTHO05D003163 7.4e-10 68.6 71 49.3
Haze_02479 Corylus avellana HOM05D002729 ORTHO05D003163 7.4e-10 68.6 74 48.6
Migut.B00837 Erythranthe guttata HOM05D002729 ORTHO05D003163 7.4e-10 68.6 54 59.3
Migut.N01043 Erythranthe guttata HOM05D002729 ORTHO05D003163 7.4e-10 68.6 74 48.6
MBI15_g33456_MAGBIO Magnolia biondii HOM05D002729 ORTHO05D003163 7.4e-10 68.6 172 29.7
Lalb_Chr15g0079821 Lupinus albus HOM05D002729 ORTHO05D003163 1.3e-09 67.8 119 34.5
Solyc10g024330.3 Solanum lycopersicum HOM05D002729 ORTHO05D003163 1.3e-09 67.8 162 30.9
Duzib132G1137 Durio zibethinus HOM05D002729 ORTHO05D003163 2.2e-09 67.0 123 31.7
Eucgr.H01461 Eucalyptus grandis HOM05D002729 ORTHO05D003163 2.2e-09 67.0 155 33.5
Lalb_Chr15g0079841 Lupinus albus HOM05D002729 ORTHO05D003163 2.2e-09 67.0 69 49.3
Lalb_Chr18g0048741 Lupinus albus HOM05D002729 ORTHO05D003163 2.2e-09 67.0 74 45.9
Nn3g16166 Nelumbo nucifera HOM05D002729 ORTHO05D003163 2.2e-09 67.0 98 36.7
SGA_v2.0_scaffold1G00307 Striga asiatica HOM05D002729 ORTHO05D003163 2.2e-09 67.0 94 42.6
HPP92_003448 Vanilla planifolia HOM05D002729 ORTHO05D003163 2.2e-09 67.0 73 47.9
Eucgr.I01557 Eucalyptus grandis HOM05D002729 ORTHO05D003163 2.8e-09 66.6 83 42.2
Prupe.8G184200 Prunus persica HOM05D002729 ORTHO05D003163 2.8e-09 66.6 70 50.0
Sed0015707 Sechium edule HOM05D002729 ORTHO05D003163 2.8e-09 66.6 73 46.6
CiPaw.06G112500 Carya illinoinensis HOM05D002729 ORTHO05D003163 3.7e-09 66.2 73 43.8
FAN15G2193 Fragaria x ananassa HOM05D002729 ORTHO05D003163 3.7e-09 66.2 77 42.9
PGR042G1728 Punica granatum HOM05D002729 ORTHO05D003163 3.7e-09 66.2 67 53.7
Sc18g0004140 Simmondsia chinensis HOM05D002729 ORTHO05D003163 3.7e-09 66.2 100 40.0
CiPaw.05G096200 Carya illinoinensis HOM05D002729 ORTHO05D003163 4.8e-09 65.9 139 33.1
Hund04402 Selenicereus undatus HOM05D002729 ORTHO05D003163 4.8e-09 65.9 158 29.1
TWI31G0290 Tripterygium wilfordii HOM05D002729 ORTHO05D003163 4.8e-09 65.9 135 33.3
Lj3g0011769 Lotus japonicus HOM05D002729 ORTHO05D003163 6.3e-09 65.5 169 31.4
HPP92_024679 Vanilla planifolia HOM05D002729 ORTHO05D003163 6.3e-09 65.5 80 43.8
Aqoxy3G01889 Aquilegia oxysepala HOM05D002729 ORTHO05D003163 8.2e-09 65.1 71 47.9
Duzib248G0051 Durio zibethinus HOM05D002729 ORTHO05D003163 8.2e-09 65.1 75 46.7
MSTRG.27844 Avicennia marina HOM05D002729 ORTHO05D003163 1.4e-08 64.3 52 57.7
Rhsim05G0044300 Rhododendron simsii HOM05D002729 ORTHO05D003163 1.4e-08 64.3 71 46.5
CSS0015863 Camellia sinensis var. sinensis HOM05D002729 ORTHO05D003163 1.8e-08 63.9 67 47.8
COL.COLO4_38062 Corchorus olitorius HOM05D002729 ORTHO05D003163 1.8e-08 63.9 75 40.0
SalBow6G2707 Salvia bowleyana HOM05D002729 ORTHO05D003163 2.4e-08 63.5 71 42.3
Duzib052G0449 Durio zibethinus HOM05D002729 ORTHO05D003163 4.1e-08 62.8 150 30.0
Gohir.A03G168800 Gossypium hirsutum HOM05D002729 ORTHO05D003163 4.1e-08 62.8 78 41.0
TAR623G1398 Trochodendron aralioides HOM05D002729 ORTHO05D003163 4.1e-08 62.8 75 44.0
unitig_8.g2955 Utricularia gibba HOM05D000760 ORTHO05D000618 4.1e-08 62.8 78 42.3
Ah.09g233880 Amaranthus hybridus HOM05D002729 ORTHO05D003163 5.3e-08 62.4 93 40.9
AUR62021812 Chenopodium quinoa HOM05D002729 ORTHO05D003163 5.3e-08 62.4 124 34.7
TWI75G1253 Tripterygium wilfordii HOM05D002729 ORTHO05D003163 5.3e-08 62.4 115 32.2
arahy.Tifrunner.gnm1.ann1.24ZDA8 Arachis hypogaea HOM05D002729 ORTHO05D003163 6.9e-08 62.0 89 36.0
arahy.Tifrunner.gnm1.ann1.AX1616 Arachis hypogaea HOM05D002729 ORTHO05D003163 6.9e-08 62.0 89 36.0
SalBow5G1968 Salvia bowleyana HOM05D002729 ORTHO05D003163 6.9e-08 62.0 76 42.1
GSVIVG01023835001 Vitis vinifera HOM05D002729 ORTHO05D003163 6.9e-08 62.0 50 56.0
Hund04400 Selenicereus undatus HOM05D002729 ORTHO05D003163 9.0e-08 61.6 171 28.7
unitig_749.g14124 Utricularia gibba HOM05D002729 ORTHO05D003163 9.0e-08 61.6 80 41.2
Actinidia38844 Actinidia chinensis HOM05D002729 ORTHO05D003163 1.2e-07 61.2 187 28.3
AagrBONN_evm.TU.Sc2ySwM_344.2824 Anthoceros agrestis HOM05D002729 ORTHO05D003163 1.2e-07 61.2 57 49.1
Hund23013 Selenicereus undatus HOM05D002729 ORTHO05D003163 1.2e-07 61.2 160 28.8
Gohir.A13G063600 Gossypium hirsutum HOM05D002729 ORTHO05D003163 1.5e-07 60.8 71 45.1
Gohir.D13G058300 Gossypium hirsutum HOM05D002729 ORTHO05D003163 1.5e-07 60.8 71 45.1
Gorai.013G065700 Gossypium raimondii HOM05D002729 ORTHO05D003163 1.5e-07 60.8 71 45.1
Nitab4.5_0000816g0020 Nicotiana tabacum HOM05D002729 ORTHO05D003163 1.5e-07 60.8 148 30.4
Nitab4.5_0003344g0010 Nicotiana tabacum HOM05D002729 ORTHO05D003163 1.5e-07 60.8 148 30.4
CDE06G1931 Ceratophyllum demersum HOM05D002729 ORTHO05D003163 2.0e-07 60.5 170 27.1
AUR62012848 Chenopodium quinoa HOM05D002729 ORTHO05D003163 2.0e-07 60.5 124 33.9
HanXRQChr10g0290711 Helianthus annuus HOM05D002729 ORTHO05D003163 2.0e-07 60.5 53 50.9
unitig_22.g6117 Utricularia gibba HOM05D002729 ORTHO05D003163 2.0e-07 60.5 52 51.9
FAN27G2173 Fragaria x ananassa HOM05D002729 ORTHO05D003163 2.6e-07 60.1 77 40.3
PSO063G4782 Papaver somniferum HOM05D002729 ORTHO05D302173 2.6e-07 60.1 97 43.3
Ciclev10012463m.g Citrus clementina HOM05D002729 ORTHO05D003163 3.4e-07 59.7 69 43.5
CARHR107550 Cardamine hirsuta HOM05D002729 ORTHO05D003163 4.5e-07 59.3 77 37.7
THA.LOC104804301 Tarenaya hassleriana HOM05D002729 ORTHO05D003163 5.9e-07 58.9 170 25.3
AL3G50270 Arabidopsis lyrata HOM05D002729 ORTHO05D003163 7.7e-07 58.5 77 37.7
MELO3C024173.2 Cucumis melo HOM05D002729 ORTHO05D003163 7.7e-07 58.5 136 30.1
Zm00001eb318200 Zea mays HOM05D002729 ORTHO05D003163 7.7e-07 58.5 124 28.2
Zm00001eb064650 Zea mays HOM05D002729 ORTHO05D003163 1.0e-06 58.2 174 26.4
A08p21870 Brassica napus HOM05D002729 ORTHO05D003163 1.3e-06 57.8 84 35.7
Carub.0003s3144 Capsella rubella HOM05D002729 ORTHO05D003163 1.3e-06 57.8 77 37.7
Medtr3g113040 Medicago truncatula HOM05D002729 ORTHO05D003163 1.3e-06 57.8 69 44.9
Pp3c8_5700 Physcomitrium patens HOM05D002729 ORTHO05D003163 1.3e-06 57.8 149 26.8
Pp3c8_5730 Physcomitrium patens HOM05D002729 ORTHO05D003163 1.3e-06 57.8 149 26.8
AT2G17390 Arabidopsis thaliana HOM05D002729 ORTHO05D003163 1.7e-06 57.4 79 35.4
AT4G35450 Arabidopsis thaliana HOM05D002729 ORTHO05D003163 1.7e-06 57.4 85 37.6
C03p80670 Brassica napus HOM05D002729 ORTHO05D003163 1.7e-06 57.4 58 44.8
Sed0012003 Sechium edule HOM05D002729 ORTHO05D003163 1.7e-06 57.4 110 33.6
AL7G15720 Arabidopsis lyrata HOM05D002729 ORTHO05D003163 2.2e-06 57.0 85 37.6
CARHR243760 Cardamine hirsuta HOM05D002729 ORTHO05D003163 2.2e-06 57.0 79 39.2
THA.LOC104807416 Tarenaya hassleriana HOM05D002729 ORTHO05D003163 2.2e-06 57.0 150 28.0
arahy.Tifrunner.gnm1.ann1.JT7AJ7 Arachis hypogaea HOM05D002729 ORTHO05D003163 2.9e-06 56.6 54 46.3
ClCG02G003120 Citrullus lanatus HOM05D002729 ORTHO05D003163 2.9e-06 56.6 110 32.7
Thhalv10025639m.g Eutrema salsugineum HOM05D002729 ORTHO05D003163 2.9e-06 56.6 59 44.1
BcaNung00593 Brassica carinata HOM05D002729 ORTHO05D003163 3.8e-06 56.2 58 44.8
BcaNung02391 Brassica carinata HOM05D002729 ORTHO05D003163 3.8e-06 56.2 58 44.8
A01p03130 Brassica napus HOM05D002729 ORTHO05D003163 3.8e-06 56.2 58 44.8
A03p63550 Brassica napus HOM05D002729 ORTHO05D003163 3.8e-06 56.2 58 44.8
C01p03480 Brassica napus HOM05D002729 ORTHO05D003163 3.8e-06 56.2 58 44.8
C07p61140 Brassica napus HOM05D002729 ORTHO05D003163 3.8e-06 56.2 58 44.8
BolC1t00335H Brassica oleracea HOM05D002729 ORTHO05D003163 3.8e-06 56.2 58 44.8
BraA01t00297Z Brassica rapa HOM05D002729 ORTHO05D003163 3.8e-06 56.2 58 44.8
BraA03t15425Z Brassica rapa HOM05D002729 ORTHO05D003163 3.8e-06 56.2 58 44.8
CsaV3_7G002290 Cucumis sativus L. HOM05D002729 ORTHO05D003163 3.8e-06 56.2 140 31.4
BcaNung06458 Brassica carinata HOM05D002729 ORTHO05D003163 5.0e-06 55.8 81 35.8
BolC3t20310H Brassica oleracea HOM05D002729 ORTHO05D003163 5.0e-06 55.8 58 44.8
Carub.0007s0488 Capsella rubella HOM05D002729 ORTHO05D003163 5.0e-06 55.8 58 44.8
Sp7g33220 Schrenkiella parvula HOM05D002729 ORTHO05D003163 5.0e-06 55.8 58 43.1
BcaB03g12412 Brassica carinata HOM05D002729 ORTHO05D003163 6.5e-06 55.5 58 43.1
Aa31LG6G12430 Aethionema arabicum HOM05D002729 ORTHO05D003163 8.5e-06 55.1 58 43.1
Sabra04G0141700 Salix brachista HOM05D002729 ORTHO05D003163 8.5e-06 55.1 93 32.3
Sabra04G0141800 Salix brachista HOM05D002729 ORTHO05D003163 8.5e-06 55.1 93 32.3


User provided reference genes

Program Settings