Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 3.7e-249 864.4 431 100.0
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 4.3e-213 744.6 441 86.6
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-203 713.0 435 83.7
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 1.3e-201 706.4 435 83.9
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 3.6e-199 698.4 440 82.7
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 3.7e-196 688.3 437 82.8
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-195 686.4 441 80.0
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 2.9e-193 678.7 440 79.5
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 9.4e-192 673.7 447 79.0
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 2.1e-191 672.5 442 79.0
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 2.2e-180 636.0 435 77.0
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 5.9e-178 627.9 433 75.5
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 6.5e-177 624.4 443 75.4
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 1.8e-171 606.3 452 72.3
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.2e-140 503.1 435 60.9
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 5.4e-139 498.4 431 61.5
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 3.5e-138 495.7 424 59.9
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.1e-136 490.7 429 60.8
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.5e-136 490.3 421 60.6
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 2.8e-135 486.1 436 58.3
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 2.0e-133 479.9 428 57.0
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 5.8e-133 478.4 350 66.6
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 7.5e-133 478.0 427 59.7
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.3e-132 477.2 422 58.5
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 7.1e-131 471.5 428 58.2
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 9.2e-131 471.1 414 59.2
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 2.7e-130 469.5 429 57.1
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 4.6e-130 468.8 419 58.7
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 4.6e-130 468.8 428 58.2
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 6.0e-130 468.4 417 55.9
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 2.3e-129 466.5 420 55.7
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 5.1e-129 465.3 417 58.5
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 6.6e-129 464.9 433 56.4
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 6.6e-129 464.9 418 58.1
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.5e-128 463.0 418 57.7
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.8e-127 459.5 420 55.7
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 3.6e-127 459.1 430 57.0
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 4.7e-127 458.8 424 58.3
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 4.7e-127 458.8 426 56.3
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.4e-126 457.2 417 57.8
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 1.4e-126 457.2 428 57.5
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 1.4e-126 457.2 422 57.6
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 3.1e-126 456.1 418 56.7
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 3.1e-126 456.1 418 56.2
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 5.2e-126 455.3 419 57.3
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 2.6e-125 453.0 427 57.1
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 7.6e-125 451.4 422 57.6
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 9.9e-125 451.1 417 56.4
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 1.3e-124 450.7 420 54.3
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.3e-124 450.7 391 58.6
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 1.3e-124 450.7 417 54.9
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 2.2e-124 449.9 427 56.2
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 2.2e-124 449.9 418 56.7
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 3.8e-124 449.1 425 56.9
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 3.8e-124 449.1 419 54.4
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 3.8e-124 449.1 397 57.2
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 4.9e-124 448.7 426 55.4
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.9e-123 446.8 416 56.7
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 1.9e-123 446.8 417 55.4
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.2e-123 446.0 445 53.5
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 4.2e-123 445.7 417 56.1
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 4.2e-123 445.7 412 56.8
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 5.4e-123 445.3 417 54.2
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 7.1e-123 444.9 421 56.3
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 9.2e-123 444.5 416 56.5
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 9.2e-123 444.5 439 53.3
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 9.2e-123 444.5 422 55.2
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 1.2e-122 444.1 423 56.3
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.1e-122 443.4 368 59.5
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 1.0e-121 441.0 415 55.9
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 1.7e-121 440.3 421 55.6
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.3e-121 439.9 341 62.5
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 2.3e-121 439.9 423 55.3
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 3.9e-121 439.1 420 54.8
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 5.1e-121 438.7 424 54.5
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 8.7e-121 438.0 433 53.6
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 1.1e-120 437.6 341 62.2
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 1.5e-120 437.2 432 54.9
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 5.6e-120 435.3 438 52.5
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 5.6e-120 435.3 417 54.4
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 7.3e-120 434.9 422 54.0
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 7.3e-120 434.9 404 55.0
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 7.3e-120 434.9 422 53.6
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 1.3e-119 434.1 431 53.6
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 2.1e-119 433.3 417 54.2
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.1e-119 433.3 419 55.6
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 2.1e-119 433.3 417 54.4
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.8e-119 433.0 416 55.5
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 6.2e-119 431.8 362 57.5
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 1.1e-118 431.0 418 55.0
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 2.4e-118 429.9 417 53.2
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 2.4e-118 429.9 417 53.2
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 2.4e-118 429.9 417 53.2
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 5.3e-118 428.7 407 54.1
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 5.3e-118 428.7 367 57.5
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 6.9e-118 428.3 341 59.8
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 9.0e-118 427.9 418 52.9
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 9.0e-118 427.9 423 53.7
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 9.0e-118 427.9 365 57.8
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.2e-117 427.6 417 54.2
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 1.5e-117 427.2 417 53.5
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 3.4e-117 426.0 344 60.5
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 4.4e-117 425.6 419 53.5
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 4.4e-117 425.6 417 53.5
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 9.9e-117 424.5 423 53.2
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.3e-116 424.1 350 58.9
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 1.7e-116 423.7 419 54.2
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.7e-116 423.7 417 54.7
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 2.2e-116 423.3 417 56.4
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 3.8e-116 422.5 382 56.5
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 4.9e-116 422.2 423 52.7
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 8.4e-116 421.4 401 52.9
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 1.1e-115 421.0 398 55.0
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 1.9e-115 420.2 334 62.3
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 2.4e-115 419.9 419 53.0
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 2.4e-115 419.9 419 53.0
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 2.4e-115 419.9 419 53.0
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 2.4e-115 419.9 341 58.4
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 4.2e-115 419.1 351 57.5
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 5.4e-115 418.7 416 53.4
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 9.3e-115 417.9 416 52.9
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 1.2e-114 417.5 416 52.9
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 1.7e-113 413.7 423 52.7
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 5.1e-113 412.1 386 57.0
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 6.6e-113 411.8 417 54.2
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 4.3e-112 409.1 417 53.5
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.6e-111 407.1 359 55.4
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.5e-109 400.6 346 57.8
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 1.5e-109 400.6 443 49.9
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 6.4e-108 395.2 331 57.4
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.4e-107 393.3 417 49.4
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.2e-106 391.0 420 50.7
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.6e-106 390.6 341 54.0
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.8e-105 387.1 342 54.1
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 3.3e-104 382.9 444 49.8
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 4.3e-104 382.5 367 54.0
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 5.8e-101 372.1 287 59.6
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 6.5e-100 368.6 454 46.5
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.4e-99 367.5 418 46.9
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.0e-97 361.3 418 46.7
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 1.5e-96 357.5 251 67.3
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.4e-94 350.9 370 53.2
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 5.3e-94 349.0 339 49.3
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 2.6e-93 346.7 339 49.0
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.2e-92 343.6 339 50.7
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 5.0e-92 342.4 341 48.7
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 1.0e-89 334.7 432 46.3
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 1.6e-87 327.4 365 44.9
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 3.7e-87 326.2 249 60.2
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 8.2e-87 325.1 339 46.9
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 3.2e-83 313.2 339 46.6
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 4.2e-83 312.8 298 53.4
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 3.6e-82 309.7 345 46.1
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 3.6e-82 309.7 239 60.7
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 2.5e-80 303.5 277 59.6
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 8.2e-79 298.5 349 45.6
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 9.4e-75 285.0 354 42.4
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 3.0e-73 280.0 386 42.5
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 7.4e-72 275.4 352 42.6
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.3e-71 274.6 346 43.1
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 2.8e-71 273.5 238 52.9
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 4.8e-71 272.7 242 53.7
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 6.3e-71 272.3 300 45.7
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.8e-68 263.1 348 41.1
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 5.0e-68 262.7 351 42.5
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.6e-66 257.7 348 40.5
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.7e-66 256.9 416 36.3
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 5.2e-65 252.7 238 50.8
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 3.5e-61 240.0 244 45.9
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 9.4e-51 205.3 348 34.8
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 2.9e-39 167.2 414 29.2
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.2e-37 161.8 150 54.7
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 1.0e-28 132.1 154 46.8
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.3e-19 100.1 115 40.0
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.2e-13 82.0 68 51.5
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.3e-12 78.6 101 35.6
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.3e-12 77.8 123 46.3
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 5.1e-12 76.6 88 46.6
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.6e-11 73.2 115 36.5
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 2.0e-08 64.7 81 37.0
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.4e-06 57.8 36 72.2


User provided reference genes

Program Settings