Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2325 Papaver somniferum HOM05D004417 ORTHO05D005528 8.7e-78 293.5 142 100.0
PSO083G0001 Papaver somniferum HOM05D004417 ORTHO05D005528 8.7e-78 293.5 142 100.0
PSO478G2641 Papaver somniferum HOM05D004417 ORTHO05D005528 1.1e-77 293.1 142 99.3
TAR374G0310 Trochodendron aralioides HOM05D004417 ORTHO05D005528 6.2e-68 260.8 142 84.5
Prupe.1G331400 Prunus persica HOM05D004417 ORTHO05D005528 2.9e-65 251.9 142 81.0
Gohir.A03G118100 Gossypium hirsutum HOM05D004417 ORTHO05D005528 4.9e-65 251.1 142 80.3
Manes.17G082000 Manihot esculenta HOM05D004417 ORTHO05D005528 6.5e-65 250.8 142 81.7
Ciclev10014030m.g Citrus clementina HOM05D004417 ORTHO05D005528 8.4e-65 250.4 142 83.1
Gohir.D02G141800 Gossypium hirsutum HOM05D004417 ORTHO05D005528 8.4e-65 250.4 142 80.3
Gorai.005G158900 Gossypium raimondii HOM05D004417 ORTHO05D005528 8.4e-65 250.4 142 80.3
GSVIVG01011680001 Vitis vinifera HOM05D004417 ORTHO05D005528 4.2e-64 248.1 142 82.4
MD13G1030100 Malus domestica HOM05D004417 ORTHO05D005528 7.1e-64 247.3 142 81.0
COL.COLO4_13080 Corchorus olitorius HOM05D004417 ORTHO05D005528 9.3e-64 246.9 142 78.2
CiPaw.05G190700 Carya illinoinensis HOM05D004417 ORTHO05D005528 2.7e-63 245.4 142 78.2
Psat6g045000 Pisum sativum HOM05D004417 ORTHO05D005528 2.7e-63 245.4 142 78.2
AUR62014157 Chenopodium quinoa HOM05D004417 ORTHO05D005528 6.0e-63 244.2 142 80.3
AUR62038465 Chenopodium quinoa HOM05D004417 ORTHO05D005528 6.0e-63 244.2 142 80.3
Dinv18635 Davidia involucrata HOM05D004417 ORTHO05D005528 6.0e-63 244.2 142 79.6
Dinv26250 Davidia involucrata HOM05D004417 ORTHO05D005528 6.0e-63 244.2 142 79.6
Nn4g24297 Nelumbo nucifera HOM05D004417 ORTHO05D005528 6.0e-63 244.2 142 80.3
QL03p034852 Quercus lobata HOM05D004417 ORTHO05D005528 6.0e-63 244.2 142 78.9
FAN17G2093 Fragaria x ananassa HOM05D004417 ORTHO05D005528 1.0e-62 243.4 142 78.9
Aqoxy3G00033 Aquilegia oxysepala HOM05D004417 ORTHO05D005528 1.3e-62 243.0 142 79.6
FvH4_4g33860 Fragaria vesca HOM05D004417 ORTHO05D005528 1.8e-62 242.7 142 78.9
FAN12G0749 Fragaria x ananassa HOM05D004417 ORTHO05D005528 1.8e-62 242.7 142 78.9
Lalb_Chr13g0290691 Lupinus albus HOM05D004417 ORTHO05D005528 1.8e-62 242.7 142 80.3
Cc11_g08040 Coffea canephora HOM05D004417 ORTHO05D005528 2.3e-62 242.3 142 81.0
CANSAT01G0135 Cannabis sativa HOM05D004417 ORTHO05D005528 3.0e-62 241.9 142 78.9
TWI74G0839 Tripterygium wilfordii HOM05D004417 ORTHO05D005528 3.9e-62 241.5 142 76.8
MD16G1020900 Malus domestica HOM05D004417 ORTHO05D005528 5.1e-62 241.1 142 79.6
Phvul.003G021100 Phaseolus vulgaris HOM05D004417 ORTHO05D005528 6.7e-62 240.7 142 78.9
Eucgr.B02949 Eucalyptus grandis HOM05D004417 ORTHO05D005528 8.7e-62 240.4 142 78.2
Thecc.02G290300 Theobroma cacao HOM05D004417 ORTHO05D005528 8.7e-62 240.4 142 76.1
CSS0010110 Camellia sinensis var. sinensis HOM05D004417 ORTHO05D005528 1.1e-61 240.0 142 78.2
CSS0030927 Camellia sinensis var. sinensis HOM05D004417 ORTHO05D005528 1.1e-61 240.0 142 78.2
Duzib251G0182 Durio zibethinus HOM05D004417 ORTHO05D005528 1.5e-61 239.6 142 76.8
Ah.03g137400 Amaranthus hybridus HOM05D004417 ORTHO05D005528 1.9e-61 239.2 142 76.8
EL10Ac6g14152 Beta vulgaris HOM05D004417 ORTHO05D005528 1.9e-61 239.2 142 80.3
Lj3A865G68 Lonicera japonica HOM05D004417 ORTHO05D005528 2.5e-61 238.8 142 79.6
DCAR_007321 Daucus carota HOM05D004417 ORTHO05D005528 4.3e-61 238.0 142 77.5
Lj2g0013863 Lotus japonicus HOM05D004417 ORTHO05D005528 4.3e-61 238.0 142 78.2
FAN07G1109 Fragaria x ananassa HOM05D004417 ORTHO05D005528 5.7e-61 237.7 142 76.8
Hund24934 Selenicereus undatus HOM05D004417 ORTHO05D005528 5.7e-61 237.7 142 76.8
Eucgr.B02952 Eucalyptus grandis HOM05D004417 ORTHO05D005528 7.4e-61 237.3 142 77.5
SalBow8G1470 Salvia bowleyana HOM05D004417 ORTHO05D005528 1.3e-60 236.5 142 77.5
vmacro00393 Vaccinium macrocarpon HOM05D004417 ORTHO05D005528 1.6e-60 236.1 142 76.8
Glyma.09G123500 Glycine max HOM05D004417 ORTHO05D005528 2.1e-60 235.7 142 76.1
Ca_12568_v3 Cicer arietinum L. HOM05D004417 ORTHO05D005528 3.7e-60 235.0 142 75.4
TPR.G36876 Trifolium pratense HOM05D004417 ORTHO05D005528 3.7e-60 235.0 142 75.4
ECA246G0702 Erigeron canadensis HOM05D004417 ORTHO05D005528 4.8e-60 234.6 142 76.8
Lsat_1_v5_gn_3_55840 Lactuca sativa HOM05D004417 ORTHO05D005528 4.8e-60 234.6 142 76.1
Nitab4.5_0000018g0020 Nicotiana tabacum HOM05D004417 ORTHO05D005528 4.8e-60 234.6 142 77.5
Peaxi162Scf00376g00032 Petunia axillaris HOM05D004417 ORTHO05D005528 4.8e-60 234.6 142 77.5
MELO3C005286.2 Cucumis melo HOM05D004417 ORTHO05D005528 6.3e-60 234.2 142 76.1
CsaV3_5G028240 Cucumis sativus L. HOM05D004417 ORTHO05D005528 6.3e-60 234.2 142 76.1
HanXRQChr17g0567351 Helianthus annuus HOM05D004417 ORTHO05D005528 1.1e-59 233.4 142 76.1
Medtr1g031910 Medicago truncatula HOM05D004417 ORTHO05D005528 1.1e-59 233.4 142 74.6
RcHm_v2.0_Chr4g0443371 Rosa chinensis HOM05D004417 ORTHO05D005528 1.1e-59 233.4 142 77.5
Atru.chr11.518 Acer truncatum HOM05D004417 ORTHO05D005528 1.4e-59 233.0 142 76.8
Oeu018613.1 Olea europaea HOM05D004417 ORTHO05D005528 1.8e-59 232.6 141 77.3
Sed0000894 Sechium edule HOM05D004417 ORTHO05D005528 1.8e-59 232.6 142 75.4
Actinidia25877 Actinidia chinensis HOM05D004417 ORTHO05D005528 3.1e-59 231.9 142 76.1
Potri.008G133300 Populus trichocarpa HOM05D004417 ORTHO05D005528 3.1e-59 231.9 142 76.1
Solyc05g016440.3 Solanum lycopersicum HOM05D004417 ORTHO05D005528 3.1e-59 231.9 142 76.1
Sopen05g013790 Solanum pennellii HOM05D004417 ORTHO05D005528 3.1e-59 231.9 142 76.1
ATR0753G138 Amborella trichopoda HOM05D004417 ORTHO05D005528 2.0e-58 229.2 143 77.6
Migut.L00554 Erythranthe guttata HOM05D004417 ORTHO05D005528 3.4e-58 228.4 142 74.6
Sc14g0006960 Simmondsia chinensis HOM05D004417 ORTHO05D005528 4.5e-58 228.0 142 73.9
Sabra08G0101900 Salix brachista HOM05D004417 ORTHO05D005528 5.9e-58 227.6 142 75.4
arahy.Tifrunner.gnm1.ann1.GYT9TN Arachis hypogaea HOM05D004417 ORTHO05D005528 1.0e-57 226.9 142 71.8
Lalb_Chr16g0387721 Lupinus albus HOM05D004417 ORTHO05D005528 5.0e-57 224.6 142 73.9
ClCG01G006440 Citrullus lanatus HOM05D004417 ORTHO05D005528 1.4e-56 223.0 154 68.8
PGR042G0049 Punica granatum HOM05D004417 ORTHO05D005528 2.5e-56 222.2 142 74.6
PGR042G2175 Punica granatum HOM05D004417 ORTHO05D005528 3.2e-56 221.9 142 74.6
THA.LOC104822992 Tarenaya hassleriana HOM05D004417 ORTHO05D005528 4.2e-56 221.5 142 71.1
MSTRG.7613 Avicennia marina HOM05D004417 ORTHO05D005528 4.6e-55 218.0 142 73.2
CDE07G0372 Ceratophyllum demersum HOM05D004417 ORTHO05D005528 6.7e-54 214.2 142 71.8
Sp1g20700 Schrenkiella parvula HOM05D004417 ORTHO05D005528 9.7e-53 210.3 142 67.6
Aa31LG7G7270 Aethionema arabicum HOM05D004417 ORTHO05D005528 1.6e-52 209.5 142 68.3
BcaB03g14154 Brassica carinata HOM05D004417 ORTHO05D005528 2.8e-52 208.8 142 65.5
BolC7t42575H Brassica oleracea HOM05D004417 ORTHO05D005528 4.8e-52 208.0 142 64.8
BraA07t29150Z Brassica rapa HOM05D004417 ORTHO05D005528 4.8e-52 208.0 142 64.8
A07p13940 Brassica napus HOM05D004417 ORTHO05D005528 6.3e-52 207.6 142 64.8
C07p20490 Brassica napus HOM05D004417 ORTHO05D005528 8.2e-52 207.2 142 64.8
Zm00001eb253700 Zea mays HOM05D004417 ORTHO05D005528 8.2e-52 207.2 142 73.2
BcaC06g35029 Brassica carinata HOM05D004417 ORTHO05D005528 1.1e-51 206.8 142 64.1
Thhalv10006548m.g Eutrema salsugineum HOM05D004417 ORTHO05D005528 1.4e-51 206.5 142 66.9
Os02g0732700 Oryza sativa ssp. japonica HOM05D004417 ORTHO05D005528 1.8e-51 206.1 142 74.6
C05p22460 Brassica napus HOM05D004417 ORTHO05D005528 1.2e-50 203.4 142 65.5
Lsat_1_v5_gn_4_12821 Lactuca sativa HOM05D004417 ORTHO05D005528 1.2e-50 203.4 143 67.8
A09p41530 Brassica napus HOM05D004417 ORTHO05D005528 2.0e-50 202.6 142 64.8
BraA09t39644Z Brassica rapa HOM05D004417 ORTHO05D005528 2.0e-50 202.6 142 64.8
BcaB07g32314 Brassica carinata HOM05D004417 ORTHO05D005528 2.6e-50 202.2 142 64.8
BcaC05g26233 Brassica carinata HOM05D004417 ORTHO05D005528 4.5e-50 201.4 142 64.8
BolC5t30944H Brassica oleracea HOM05D004417 ORTHO05D005528 4.5e-50 201.4 142 64.8
CARHR023690 Cardamine hirsuta HOM05D004417 ORTHO05D005528 4.5e-50 201.4 142 64.8
HanXRQChr17g0566691 Helianthus annuus HOM05D004417 ORTHO05D005528 4.5e-50 201.4 143 65.0
AL1G37020 Arabidopsis lyrata HOM05D004417 ORTHO05D005528 5.9e-50 201.1 142 66.2
AT1G23230 Arabidopsis thaliana HOM05D004417 ORTHO05D005528 5.9e-50 201.1 142 66.2
Carub.0001s2282 Capsella rubella HOM05D004417 ORTHO05D005528 1.0e-49 200.3 142 66.9
Rhsim09G0063500 Rhododendron simsii HOM05D004417 ORTHO05D005528 1.3e-49 199.9 237 47.7
Actinidia25661 Actinidia chinensis HOM05D004417 ORTHO05D005528 7.9e-47 190.7 142 67.6
SEGI_05575 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 1.4e-46 189.9 143 62.9
SHI04465 Sapria himalayana HOM05D004417 ORTHO05D005528 5.1e-46 188.0 142 65.5
SMO364G0727 Selaginella moellendorffii HOM05D004417 ORTHO05D005528 4.4e-45 184.9 143 58.7
Mapoly0005s0093 Marchantia polymorpha HOM05D004417 ORTHO05D005528 1.2e-42 176.8 143 58.7
Pp3c27_2940 Physcomitrium patens HOM05D004417 ORTHO05D005528 2.5e-40 169.1 139 56.8
DCAR_030256 Daucus carota HOM05D004417 ORTHO05D005528 1.8e-38 162.9 142 58.5
VMungo1215G0989 Vigna mungo HOM05D004417 ORTHO05D005528 1.4e-35 153.3 98 75.5
SGA_v2.0_scaffold50G18460 Striga asiatica HOM05D004417 ORTHO05D005528 5.9e-34 147.9 91 74.7
arahy.Tifrunner.gnm1.ann1.W0X7A3 Arachis hypogaea HOM05D004417 ORTHO05D005528 1.6e-26 123.2 103 59.2
Haze_10917 Corylus avellana HOM05D004417 ORTHO05D005528 5.0e-17 91.7 47 80.9
Psat1g176600 Pisum sativum HOM05D002927 ORTHO05D015040 1.5e-16 90.1 55 74.5
Duzib084G1091 Durio zibethinus HOM05D004417 ORTHO05D005528 9.8e-13 77.4 49 61.2
BcaB07g32312 Brassica carinata HOM05D004417 ORTHO05D005528 1.4e-11 73.6 47 63.8
Nitab4.5_0008542g0040 Nicotiana tabacum HOM05D004417 ORTHO05D005528 4.1e-11 72.0 94 45.7
Psat0s3527g0040 Pisum sativum HOM05D005005 ORTHO05D006178 5.9e-10 68.2 38 65.8
VMungo1215G0458 Vigna mungo HOM05D004417 ORTHO05D005528 3.8e-09 65.5 32 84.4


User provided reference genes

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