Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO081G0177 Papaver somniferum HOM05D001445 ORTHO05D001261 1.9e-59 232.3 114 100.0
PSO081G0031 Papaver somniferum HOM05D001445 ORTHO05D001261 1.1e-41 173.3 112 78.6
PSO081G0157 Papaver somniferum HOM05D001445 ORTHO05D001261 2.3e-41 172.2 112 77.7
PSO081G0174 Papaver somniferum HOM05D001445 ORTHO05D001261 2.3e-41 172.2 112 77.7
PSO081G0055 Papaver somniferum HOM05D001445 ORTHO05D001261 6.8e-41 170.6 112 77.7
PSO782G5274 Papaver somniferum HOM05D001445 ORTHO05D001261 2.9e-15 85.5 111 43.2
PSO478G2336 Papaver somniferum HOM05D001445 ORTHO05D001261 3.8e-15 85.1 114 43.0
PSO782G4131 Papaver somniferum HOM05D001445 ORTHO05D001261 5.4e-14 81.3 110 46.4
PSO782G4884 Papaver somniferum HOM05D001445 ORTHO05D001261 9.3e-14 80.5 115 43.5
TAR375G0630 Trochodendron aralioides HOM05D001445 ORTHO05D001261 9.3e-14 80.5 111 40.5
FAN13G3027 Fragaria x ananassa HOM05D001445 ORTHO05D001261 2.1e-13 79.3 110 40.0
PSO478G4988 Papaver somniferum HOM05D001445 ORTHO05D001261 2.7e-13 79.0 114 41.2
RcHm_v2.0_Chr7g0207991 Rosa chinensis HOM05D001445 ORTHO05D001261 2.7e-13 79.0 110 40.9
TAR073G0001 Trochodendron aralioides HOM05D001445 ORTHO05D001261 2.7e-13 79.0 112 38.4
TAR629G3049 Trochodendron aralioides HOM05D001445 ORTHO05D001261 2.7e-13 79.0 108 41.7
FAN08G1111 Fragaria x ananassa HOM05D001445 ORTHO05D001261 7.9e-13 77.4 110 39.1
TAR629G2132 Trochodendron aralioides HOM05D001445 ORTHO05D001261 7.9e-13 77.4 115 40.9
FvH4_5g20940 Fragaria vesca HOM05D001445 ORTHO05D001261 1.0e-12 77.0 110 39.1
FAN18G4149 Fragaria x ananassa HOM05D001445 ORTHO05D001261 1.0e-12 77.0 110 39.1
TAR375G1152 Trochodendron aralioides HOM05D001445 ORTHO05D001261 3.9e-12 75.1 113 38.9
RcHm_v2.0_Chr1g0344031 Rosa chinensis HOM05D001445 ORTHO05D001261 5.1e-12 74.7 113 38.1
Prupe.5G048900 Prunus persica HOM05D001445 ORTHO05D001261 6.7e-12 74.3 110 40.0
FvH4_7g08770 Fragaria vesca HOM05D001445 ORTHO05D001261 1.9e-11 72.8 111 38.7
RcHm_v2.0_Chr1g0344051 Rosa chinensis HOM05D001445 ORTHO05D001261 3.3e-11 72.0 112 40.2
TPR.G19189 Trifolium pratense HOM05D001445 ORTHO05D001261 3.3e-11 72.0 116 35.3
FAN06G3435 Fragaria x ananassa HOM05D001445 ORTHO05D001261 4.3e-11 71.6 110 38.2
PSO832G0663 Papaver somniferum HOM05D001445 ORTHO05D001261 1.3e-10 70.1 112 37.5
MD07G1088700 Malus domestica HOM05D001445 ORTHO05D001261 1.6e-10 69.7 110 37.3
TAR375G0055 Trochodendron aralioides HOM05D001445 ORTHO05D001261 2.8e-10 68.9 112 37.5
PSO541G5973 Papaver somniferum HOM05D001445 ORTHO05D001261 3.6e-10 68.6 116 36.2
PSO832G1165 Papaver somniferum HOM05D001445 ORTHO05D001261 3.6e-10 68.6 112 36.6
Eucgr.E00321 Eucalyptus grandis HOM05D001445 ORTHO05D001261 4.8e-10 68.2 112 35.7
Medtr4g099010 Medicago truncatula HOM05D001445 ORTHO05D001261 4.8e-10 68.2 116 34.5
Medtr8g009300 Medicago truncatula HOM05D001445 ORTHO05D001261 4.8e-10 68.2 114 33.3
Hma1.2p1_0311F.1_g121170 Hydrangea macrophylla HOM05D001445 ORTHO05D001261 6.2e-10 67.8 112 37.5
Hma1.2p1_0414F.1_g147630 Hydrangea macrophylla HOM05D001445 ORTHO05D001261 6.2e-10 67.8 106 36.8
Manes.15G171900 Manihot esculenta HOM05D001445 ORTHO05D001261 6.2e-10 67.8 110 35.5
Nn1g00664 Nelumbo nucifera HOM05D001445 ORTHO05D001261 6.2e-10 67.8 115 39.1
Nn1g02148 Nelumbo nucifera HOM05D001445 ORTHO05D001261 6.2e-10 67.8 111 37.8
Prupe.2G115600 Prunus persica HOM05D001445 ORTHO05D001261 6.2e-10 67.8 112 36.6
Psat4g219240 Pisum sativum HOM05D001445 ORTHO05D001261 1.1e-09 67.0 111 34.2
Sabra14G0032000 Salix brachista HOM05D001445 ORTHO05D001261 1.4e-09 66.6 112 34.8
Duzib205G0415 Durio zibethinus HOM05D001445 ORTHO05D001261 1.8e-09 66.2 113 33.6
PGR004G0072 Punica granatum HOM05D001445 ORTHO05D001261 1.8e-09 66.2 114 33.3
RcHm_v2.0_Chr1g0344001 Rosa chinensis HOM05D001445 ORTHO05D001261 1.8e-09 66.2 113 35.4
TPR.G39508 Trifolium pratense HOM05D001445 ORTHO05D001261 1.8e-09 66.2 112 33.0
Dinv25174 Davidia involucrata HOM05D001445 ORTHO05D001261 2.4e-09 65.9 112 35.7
Nn1g00650 Nelumbo nucifera HOM05D001445 ORTHO05D001261 2.4e-09 65.9 110 33.6
CSS0020469 Camellia sinensis var. sinensis HOM05D001445 ORTHO05D001261 3.1e-09 65.5 113 34.5
Lalb_Chr12g0210341 Lupinus albus HOM05D001445 ORTHO05D001261 3.1e-09 65.5 112 33.0
VMungo0251G1280 Vigna mungo HOM05D001445 ORTHO05D001261 3.1e-09 65.5 110 33.6
Duzib133G0634 Durio zibethinus HOM05D001445 ORTHO05D001261 5.3e-09 64.7 112 34.8
COL.COLO4_12351 Corchorus olitorius HOM05D001445 ORTHO05D001261 6.9e-09 64.3 112 35.7
CsaV3_6G006710 Cucumis sativus L. HOM05D005488 ORTHO05D001261 6.9e-09 64.3 110 38.2
Lsat_1_v5_gn_7_11841 Lactuca sativa HOM05D001445 ORTHO05D001261 6.9e-09 64.3 115 33.9
Lj4g0026234 Lotus japonicus HOM05D001445 ORTHO05D001261 6.9e-09 64.3 115 31.3
TWI15G1112 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 6.9e-09 64.3 119 33.6
HanXRQChr04g0115481 Helianthus annuus HOM05D001445 ORTHO05D001261 9.0e-09 63.9 115 33.9
PSO151G0158 Papaver somniferum HOM05D001445 ORTHO05D001261 9.0e-09 63.9 112 34.8
PSO573G0024 Papaver somniferum HOM05D001445 ORTHO05D001261 9.0e-09 63.9 81 38.3
MELO3C022456.2 Cucumis melo HOM05D001445 ORTHO05D001261 1.2e-08 63.5 111 36.9
ClCG06G000830 Citrullus lanatus HOM05D001445 ORTHO05D001261 1.5e-08 63.2 111 33.3
ECA236G4359 Erigeron canadensis HOM05D001445 ORTHO05D001261 1.5e-08 63.2 114 32.5
CAN.G756.16 Capsicum annuum HOM05D001445 ORTHO05D001261 2.0e-08 62.8 113 32.7
Duzib084G0977 Durio zibethinus HOM05D001445 ORTHO05D001261 2.0e-08 62.8 112 32.1
Potri.014G044100 Populus trichocarpa HOM05D001445 ORTHO05D001261 2.0e-08 62.8 112 31.2
MSTRG.4961 Avicennia marina HOM05D001445 ORTHO05D001261 2.6e-08 62.4 113 31.0
CiPaw.13G022000 Carya illinoinensis HOM05D001445 ORTHO05D001261 2.6e-08 62.4 112 33.0
Phvul.003G227500 Phaseolus vulgaris HOM05D001445 ORTHO05D001261 3.4e-08 62.0 114 30.7
ClCG06G016040 Citrullus lanatus HOM05D001445 ORTHO05D001261 4.5e-08 61.6 111 35.1
Peaxi162Scf00084g00062 Petunia axillaris HOM05D001445 ORTHO05D001261 4.5e-08 61.6 114 39.5
Sed0025882 Sechium edule HOM05D001445 ORTHO05D001261 4.5e-08 61.6 112 33.0
Sopen01g035440 Solanum pennellii HOM05D001445 ORTHO05D001261 4.5e-08 61.6 113 31.9
CDE12G0631 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 5.8e-08 61.2 108 33.3
CsaV3_1G002510 Cucumis sativus L. HOM05D001445 ORTHO05D001261 5.8e-08 61.2 111 33.3
MBI04_g03340_MAGBIO Magnolia biondii HOM05D001445 ORTHO05D001261 5.8e-08 61.2 111 35.1
Nn1g00654 Nelumbo nucifera HOM05D001445 ORTHO05D001261 5.8e-08 61.2 114 35.1
PSO782G0985 Papaver somniferum HOM05D001445 ORTHO05D001261 5.8e-08 61.2 110 34.5
PSO081G0057 Papaver somniferum HOM05D001445 ORTHO05D001261 7.6e-08 60.8 109 33.9
Dinv28905 Davidia involucrata HOM05D001445 ORTHO05D001261 9.9e-08 60.5 90 36.7
Phvul.010G041500 Phaseolus vulgaris HOM05D001445 ORTHO05D001261 9.9e-08 60.5 114 33.3
unitig_749.g13774 Utricularia gibba HOM05D001445 ORTHO05D001261 9.9e-08 60.5 114 33.3
VMungo0331G1992 Vigna mungo HOM05D001445 ORTHO05D001261 9.9e-08 60.5 114 33.3
Solyc01g088590.5 Solanum lycopersicum HOM05D001445 ORTHO05D001261 1.3e-07 60.1 113 31.0
Cfa011022 Carpinus fangiana HOM05D001445 ORTHO05D001261 1.7e-07 59.7 109 34.9
Haze_02903 Corylus avellana HOM05D001445 ORTHO05D001261 1.7e-07 59.7 112 33.9
MELO3C022458.2 Cucumis melo HOM05D001445 ORTHO05D001261 1.7e-07 59.7 111 31.5
Migut.B01486 Erythranthe guttata HOM05D001445 ORTHO05D001261 1.7e-07 59.7 114 31.6
Migut.N01714 Erythranthe guttata HOM05D001445 ORTHO05D001261 1.7e-07 59.7 114 34.2
Gorai.001G141600 Gossypium raimondii HOM05D001445 ORTHO05D001261 1.7e-07 59.7 114 35.1
Lj3g0025567 Lotus japonicus HOM05D001445 ORTHO05D001261 1.7e-07 59.7 112 31.2
PSO081G0137 Papaver somniferum HOM05D001445 ORTHO05D001261 1.7e-07 59.7 119 37.8
Sed0025391 Sechium edule HOM05D001445 ORTHO05D001261 1.7e-07 59.7 112 33.0
CsaV3_6G006700 Cucumis sativus L. HOM05D001445 ORTHO05D001261 2.2e-07 59.3 111 31.5
vmacro21085 Vaccinium macrocarpon HOM05D001445 ORTHO05D001261 2.2e-07 59.3 115 30.4
COL.COLO4_17127 Corchorus olitorius HOM05D001445 ORTHO05D001261 2.9e-07 58.9 107 35.5
ClCG06G000850 Citrullus lanatus HOM05D001445 ORTHO05D001261 3.8e-07 58.5 110 34.5
Glyma.03G103400 Glycine max HOM05D001445 ORTHO05D001261 3.8e-07 58.5 113 31.0
Gohir.D07G130800 Gossypium hirsutum HOM05D001445 ORTHO05D001261 3.8e-07 58.5 114 35.1
Nitab4.5_0005034g0010 Nicotiana tabacum HOM05D001445 ORTHO05D001261 3.8e-07 58.5 113 29.2
Atru.chr5.42 Acer truncatum HOM05D001445 ORTHO05D001261 4.9e-07 58.2 119 33.6
Atru.chr5.72 Acer truncatum HOM05D001445 ORTHO05D001261 4.9e-07 58.2 119 33.6
Actinidia25936 Actinidia chinensis HOM05D001445 ORTHO05D001261 4.9e-07 58.2 101 34.7
Ah.09g229110 Amaranthus hybridus HOM05D001445 ORTHO05D001261 4.9e-07 58.2 116 29.3
EL10Ac1g00256 Beta vulgaris HOM05D001445 ORTHO05D001261 4.9e-07 58.2 111 35.1
Gohir.D03G169433 Gossypium hirsutum HOM05D001445 ORTHO05D001261 4.9e-07 58.2 115 33.0
Gorai.003G179700 Gossypium raimondii HOM05D001445 ORTHO05D001261 4.9e-07 58.2 115 33.0
Aqoxy2G02898 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 6.4e-07 57.8 115 33.9
DCAR_025024 Daucus carota HOM05D001445 ORTHO05D001261 6.4e-07 57.8 113 31.0
Gohir.D08G161800 Gossypium hirsutum HOM05D001445 ORTHO05D001261 6.4e-07 57.8 111 33.3
Gorai.004G168200 Gossypium raimondii HOM05D001445 ORTHO05D001261 6.4e-07 57.8 111 33.3
RcHm_v2.0_Chr7g0207981 Rosa chinensis HOM05D001445 ORTHO05D001261 6.4e-07 57.8 109 35.8
MELO3C017187.2 Cucumis melo HOM05D001445 ORTHO05D001261 8.4e-07 57.4 111 30.6
Sed0004326 Sechium edule HOM05D001445 ORTHO05D001261 8.4e-07 57.4 109 33.0
PGSC0003DMG400001844 Solanum tuberosum HOM05D001445 ORTHO05D001261 8.4e-07 57.4 113 35.4
Thecc.01G402600 Theobroma cacao HOM05D001445 ORTHO05D001261 8.4e-07 57.4 113 31.0
TWI59G0004 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 8.4e-07 57.4 113 31.0
CANSAT25G2716 Cannabis sativa HOM05D001445 ORTHO05D001261 1.4e-06 56.6 141 30.5
Cc02_g25640 Coffea canephora HOM05D001445 ORTHO05D001261 1.4e-06 56.6 107 31.8
COL.COLO4_17125 Corchorus olitorius HOM05D001445 ORTHO05D001261 1.4e-06 56.6 107 33.6
SGA_v2.0_scaffold52G19268 Striga asiatica HOM05D001445 ORTHO05D001261 1.4e-06 56.6 114 31.6
Actinidia30953 Actinidia chinensis HOM05D001445 ORTHO05D001261 1.9e-06 56.2 94 31.9
FvH4_5g20930 Fragaria vesca HOM05D001445 ORTHO05D001261 2.4e-06 55.8 109 33.9
FAN18G2178 Fragaria x ananassa HOM05D001445 ORTHO05D001261 2.4e-06 55.8 109 33.9
MD06G1041900 Malus domestica HOM05D001445 ORTHO05D001261 2.4e-06 55.8 112 34.8
PSO675G4879 Papaver somniferum HOM05D001445 ORTHO05D001261 2.4e-06 55.8 116 36.2
Rhsim11G0009400 Rhododendron simsii HOM05D001445 ORTHO05D001261 2.4e-06 55.8 112 33.9
Ciclev10023652m.g Citrus clementina HOM05D001445 ORTHO05D001261 3.2e-06 55.5 113 32.7
COL.COLO4_17126 Corchorus olitorius HOM05D001445 ORTHO05D001261 3.2e-06 55.5 99 34.3
PGSC0003DMG400001728 Solanum tuberosum HOM05D001445 ORTHO05D001261 3.2e-06 55.5 113 30.1
unitig_750.g28405 Utricularia gibba HOM05D001445 ORTHO05D001261 3.2e-06 55.5 111 31.5
Thhalv10001100m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 4.2e-06 55.1 110 30.9
Ciclev10033644m.g Citrus clementina HOM05D001445 ORTHO05D001261 5.5e-06 54.7 109 34.9
Manes.09G173500 Manihot esculenta HOM05D003556 ORTHO05D003404 5.5e-06 54.7 112 33.9
CDE04G0621 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 7.1e-06 54.3 93 33.3
FAN08G3072 Fragaria x ananassa HOM05D001445 ORTHO05D001261 9.3e-06 53.9 109 33.0
Sc18g0002750 Simmondsia chinensis HOM05D001445 ORTHO05D001261 9.3e-06 53.9 111 29.7


User provided reference genes

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