Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 1.1e-165 586.6 307 100.0
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 2.4e-165 585.5 307 99.7
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 4.5e-164 581.3 307 98.7
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 2.9e-139 498.8 308 77.9
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 2.8e-137 492.3 307 77.2
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 2.8e-137 492.3 311 77.5
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 3.0e-136 488.8 310 75.8
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 5.7e-135 484.6 310 74.5
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 5.7e-135 484.6 307 76.9
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.7e-134 483.0 307 76.2
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 2.9e-134 482.3 311 74.9
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 6.4e-134 481.1 307 75.2
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 6.4e-134 481.1 307 75.2
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 8.3e-134 480.7 310 73.5
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.1e-133 480.3 311 76.8
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 3.2e-133 478.8 309 75.4
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 4.1e-133 478.4 311 71.7
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 4.1e-133 478.4 307 75.2
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 4.1e-133 478.4 309 74.1
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 7.0e-133 477.6 311 74.0
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 2.7e-132 475.7 311 74.0
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 5.9e-132 474.6 307 73.0
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 2.3e-131 472.6 310 74.8
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 3.0e-131 472.2 311 73.3
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 3.9e-131 471.9 310 75.5
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 6.6e-131 471.1 311 74.9
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 8.6e-131 470.7 311 72.7
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 1.5e-130 469.9 307 73.6
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 1.9e-130 469.5 311 76.2
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 3.3e-130 468.8 307 72.3
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 3.3e-130 468.8 307 73.9
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 4.3e-130 468.4 310 72.9
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 5.6e-130 468.0 309 73.1
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 7.3e-130 467.6 308 74.7
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 4.7e-129 464.9 307 72.6
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 6.2e-129 464.5 311 72.0
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 6.2e-129 464.5 308 73.1
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 1.5e-127 459.9 311 73.6
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 1.5e-127 459.9 311 72.7
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 2.2e-126 456.1 310 72.3
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 4.9e-126 454.9 311 69.5
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 1.1e-125 453.8 311 69.8
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 1.1e-125 453.8 307 72.6
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 1.1e-125 453.8 311 71.7
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 1.9e-125 453.0 323 70.0
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 1.9e-125 453.0 307 71.3
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 2.4e-125 452.6 304 71.1
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 2.4e-125 452.6 311 70.1
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 2.4e-125 452.6 311 70.1
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 5.4e-125 451.4 311 69.1
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 5.4e-125 451.4 311 70.4
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 7.0e-125 451.1 307 70.7
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 9.2e-125 450.7 307 70.4
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 9.2e-125 450.7 311 69.8
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 2.0e-124 449.5 311 69.8
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 2.7e-124 449.1 306 70.9
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 4.6e-124 448.4 306 70.3
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 7.8e-124 447.6 311 69.5
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 1.0e-123 447.2 308 70.5
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 1.0e-123 447.2 304 72.7
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 1.3e-123 446.8 307 69.7
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 1.3e-123 446.8 306 69.9
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 1.3e-123 446.8 312 69.9
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 1.3e-123 446.8 310 70.0
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 1.3e-123 446.8 307 70.0
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 3.0e-123 445.7 307 70.4
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 3.0e-123 445.7 310 70.3
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 8.6e-123 444.1 309 70.6
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 1.5e-122 443.4 307 69.4
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 2.5e-122 442.6 303 71.6
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 4.3e-122 441.8 307 69.7
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 2.8e-121 439.1 307 68.7
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 3.6e-121 438.7 305 70.8
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 3.6e-121 438.7 303 70.6
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 4.7e-121 438.3 309 67.6
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 4.7e-121 438.3 309 69.3
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 8.9e-120 434.1 309 68.9
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 1.2e-119 433.7 305 67.2
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 5.8e-119 431.4 307 67.4
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 1.7e-118 429.9 306 68.0
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 2.9e-118 429.1 307 68.7
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 2.4e-117 426.0 307 68.4
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 3.2e-117 425.6 314 72.0
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 9.2e-117 424.1 308 68.2
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 2.7e-116 422.5 307 66.4
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 2.7e-116 422.5 310 68.7
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 1.1e-114 417.2 372 58.6
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 1.1e-114 417.2 306 64.7
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 3.3e-114 415.6 311 66.6
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 4.3e-114 415.2 309 67.3
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 7.3e-114 414.5 309 67.3
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 2.1e-113 412.9 308 66.2
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 8.1e-113 411.0 309 66.3
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 4.4e-111 405.2 307 65.8
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 9.9e-111 404.1 309 67.6
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 9.9e-111 404.1 309 68.3
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 6.6e-107 391.3 306 63.7
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 3.3e-98 362.5 432 47.0
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 5.6e-98 361.7 311 60.1
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 1.5e-90 337.0 185 85.9
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 6.9e-88 328.2 404 42.8
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 1.5e-87 327.0 406 42.6
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 9.9e-87 324.3 299 57.9
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 1.1e-85 320.9 466 41.8
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 7.1e-85 318.2 297 51.5
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 1.6e-84 317.0 310 54.8
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 1.6e-84 317.0 185 80.5
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 1.3e-78 297.4 303 52.8
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 8.4e-78 294.7 490 36.7
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 9.6e-74 281.2 307 50.5
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 4.6e-68 262.3 249 57.0
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 5.1e-59 232.3 188 58.5
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 1.4e-53 214.2 122 83.6
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 3.3e-50 203.0 112 85.7
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 4.1e-40 169.5 140 60.7
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 6.1e-28 129.0 206 35.0
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 2.0e-26 124.0 73 79.5
Nn1g03516 Nelumbo nucifera HOM05D005975 ORTHO05D007373 3.1e-11 73.6 49 77.6
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 5.2e-11 72.8 104 45.2
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 7.5e-10 68.9 49 57.1
Nn4g23789 Nelumbo nucifera HOM05D005975 ORTHO05D007373 7.0e-08 62.4 39 64.1
Potri.001G289250 Populus trichocarpa HOM05D005975 ORTHO05D007373 8.6e-06 55.5 48 54.2


User provided reference genes

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