Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 6.3e-49 197.2 105 100.0
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 2.0e-42 175.6 96 97.9
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 1.7e-38 162.5 105 79.0
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 4.2e-37 157.9 102 79.4
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 3.6e-36 154.8 105 76.2
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 4.7e-36 154.5 103 76.7
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 1.0e-35 153.3 102 75.5
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 1.4e-35 152.9 103 73.8
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 1.4e-35 152.9 106 75.5
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 3.0e-35 151.8 101 78.2
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 3.0e-35 151.8 105 75.2
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 8.8e-35 150.2 103 75.7
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 1.5e-34 149.4 110 72.7
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 4.4e-34 147.9 106 73.6
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 7.4e-34 147.1 105 72.4
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 7.4e-34 147.1 105 72.4
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 1.3e-33 146.4 105 71.4
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 1.7e-33 146.0 103 71.8
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 2.2e-33 145.6 108 71.3
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 2.2e-33 145.6 105 71.4
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 3.7e-33 144.8 106 71.7
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 4.8e-33 144.4 107 72.9
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 1.1e-32 143.3 105 75.2
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 1.8e-32 142.5 105 70.5
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 1.8e-32 142.5 107 72.0
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 1.8e-32 142.5 105 69.5
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 3.1e-32 141.7 107 72.0
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 3.1e-32 141.7 107 71.0
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 7.0e-32 140.6 101 72.3
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 1.6e-31 139.4 103 68.9
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 1.0e-30 136.7 102 72.5
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 1.3e-30 136.3 103 66.0
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 1.3e-30 136.3 103 68.0
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 1.7e-30 136.0 100 74.0
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 2.9e-30 135.2 105 68.6
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 2.9e-30 135.2 109 68.8
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 8.5e-30 133.7 105 67.6
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 8.5e-30 133.7 102 68.6
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 8.5e-30 133.7 102 67.6
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 1.5e-29 132.9 105 66.7
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 1.5e-29 132.9 105 66.7
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 1.9e-29 132.5 105 65.7
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 1.9e-29 132.5 104 63.5
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 2.5e-29 132.1 105 66.7
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 2.5e-29 132.1 105 66.7
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 2.5e-29 132.1 105 66.7
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 2.5e-29 132.1 105 66.7
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 3.2e-29 131.7 108 65.7
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 3.2e-29 131.7 103 67.0
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 5.5e-29 131.0 103 72.8
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 5.5e-29 131.0 102 65.7
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 2.1e-28 129.0 102 68.6
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 2.1e-28 129.0 104 64.4
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 4.7e-28 127.9 103 66.0
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 6.1e-28 127.5 103 63.1
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 6.1e-28 127.5 106 64.2
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 6.1e-28 127.5 102 67.6
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 8.0e-28 127.1 105 62.9
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.4e-27 126.3 124 60.5
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 3.0e-27 125.2 100 67.0
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 4.0e-27 124.8 103 61.2
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 4.0e-27 124.8 103 63.1
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 5.2e-27 124.4 101 66.3
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 1.1e-26 123.2 103 62.1
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 1.5e-26 122.9 103 61.2
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 2.0e-26 122.5 106 63.2
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 2.0e-26 122.5 105 63.8
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 2.6e-26 122.1 103 63.1
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 1.3e-25 119.8 99 62.6
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 1.3e-25 119.8 103 61.2
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 1.7e-25 119.4 101 63.4
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 1.7e-25 119.4 98 64.3
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 2.8e-25 118.6 97 63.9
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 3.7e-25 118.2 101 63.4
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 3.7e-25 118.2 105 59.0
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 6.3e-25 117.5 102 62.7
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 2.4e-24 115.5 101 61.4
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 5.3e-24 114.4 103 61.2
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 7.0e-24 114.0 96 62.5
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 4.5e-23 111.3 96 62.5
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 1.3e-22 109.8 104 57.7
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 2.9e-22 108.6 115 57.4
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 1.9e-21 105.9 81 70.4
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 7.2e-21 104.0 89 59.6
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 4.7e-20 101.3 109 53.2
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 1.0e-19 100.1 117 52.1
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 1.0e-19 100.1 81 67.9
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 1.0e-19 100.1 116 50.0
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 2.3e-19 99.0 100 55.0
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 5.2e-19 97.8 67 77.6
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 6.8e-19 97.4 68 67.6
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 6.8e-19 97.4 104 52.9
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 2.0e-18 95.9 67 76.1
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 3.4e-18 95.1 64 76.6
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 3.7e-17 91.7 67 73.1
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 4.8e-17 91.3 67 70.1
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 4.1e-16 88.2 89 55.1
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 1.6e-15 86.3 66 69.7
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 1.7e-14 82.8 68 67.6
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 3.8e-14 81.6 53 81.1
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 1.5e-13 79.7 50 80.0
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 3.2e-13 78.6 50 82.0
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 7.2e-13 77.4 52 78.8
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 9.5e-13 77.0 60 71.7
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.6e-12 76.3 53 81.1
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 1.5e-10 69.7 53 67.9
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 8.3e-09 63.9 39 79.5
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 2.4e-08 62.4 104 38.5


User provided reference genes

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