Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 4.9e-126 454.5 234 100.0
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 1.4e-125 453.0 234 99.6
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 5.8e-87 324.7 234 72.2
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 1.7e-86 323.2 236 71.6
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 1.7e-83 313.2 229 72.5
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 5.1e-83 311.6 235 70.2
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 8.7e-83 310.8 233 71.2
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 8.7e-83 310.8 235 69.8
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 1.3e-81 307.0 242 68.2
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 2.8e-81 305.8 235 68.1
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 6.2e-81 304.7 236 71.6
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 8.1e-81 304.3 235 70.2
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.8e-80 303.1 231 70.1
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 4.0e-80 302.0 221 69.2
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 6.9e-80 301.2 236 66.1
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 9.0e-80 300.8 236 66.5
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 1.5e-79 300.1 234 66.7
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 4.5e-79 298.5 234 66.2
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 5.8e-79 298.1 235 66.8
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 5.8e-79 298.1 239 67.4
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 5.8e-79 298.1 230 67.0
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.3e-78 297.0 232 66.4
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.3e-78 297.0 233 65.7
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 1.7e-78 296.6 242 65.3
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 2.9e-78 295.8 231 67.1
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 2.9e-78 295.8 240 65.8
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 4.9e-78 295.0 232 65.9
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 6.4e-78 294.7 230 67.0
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 6.4e-78 294.7 230 67.0
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 6.4e-78 294.7 235 68.1
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 6.4e-78 294.7 232 66.4
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 6.4e-78 294.7 237 66.7
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 1.9e-77 293.1 234 65.0
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.9e-77 293.1 232 65.9
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 2.4e-77 292.7 231 66.7
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 5.4e-77 291.6 230 66.5
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 5.4e-77 291.6 230 66.5
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 5.4e-77 291.6 236 64.0
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 7.1e-77 291.2 227 68.7
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 9.3e-77 290.8 241 66.4
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 1.2e-76 290.4 233 66.1
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 2.1e-76 289.7 248 62.5
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 2.1e-76 289.7 237 67.9
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 4.6e-76 288.5 239 63.2
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 4.6e-76 288.5 234 65.4
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 4.6e-76 288.5 226 62.8
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 6.0e-76 288.1 233 66.5
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 6.0e-76 288.1 240 62.5
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 6.0e-76 288.1 236 67.4
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 1.0e-75 287.3 233 66.5
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 1.0e-75 287.3 236 66.1
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 1.3e-75 287.0 234 67.1
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 1.3e-75 287.0 231 66.7
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 3.9e-75 285.4 234 64.5
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 6.7e-75 284.6 231 67.5
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 1.5e-74 283.5 231 66.7
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 5.6e-74 281.6 233 64.4
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 1.6e-73 280.0 260 59.6
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 2.1e-73 279.6 233 62.7
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 2.8e-73 279.3 240 63.8
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 6.2e-73 278.1 201 71.6
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 1.1e-72 277.3 233 62.2
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 3.1e-72 275.8 235 62.6
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 4.0e-72 275.4 236 61.0
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 1.5e-71 273.5 233 63.1
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 1.5e-71 273.5 187 72.2
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 9.9e-71 270.8 229 62.9
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 2.2e-70 269.6 230 62.2
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 8.4e-70 267.7 234 64.1
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 1.1e-69 267.3 228 61.0
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 3.2e-69 265.8 228 62.7
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 9.3e-69 264.2 239 61.1
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 1.2e-68 263.8 180 73.9
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 2.1e-68 263.1 237 61.6
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 2.3e-67 259.6 240 61.2
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 3.0e-67 259.2 241 59.3
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 3.0e-67 259.2 237 60.8
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 5.1e-67 258.5 239 60.7
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 4.3e-66 255.4 241 58.5
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 7.4e-66 254.6 223 61.9
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 9.6e-66 254.2 240 60.0
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 3.1e-64 249.2 234 56.8
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 1.2e-63 247.3 227 59.0
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 1.0e-62 244.2 230 60.0
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 2.7e-60 236.1 241 58.1
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 1.3e-59 233.8 159 73.0
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 3.0e-59 232.6 224 55.8
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 7.4e-58 228.0 234 53.8
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 2.6e-55 219.5 222 55.0
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 3.4e-55 219.2 233 54.1
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 5.9e-55 218.4 197 58.9
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 7.6e-55 218.0 184 62.0
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 5.0e-54 215.3 233 56.2
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 4.2e-53 212.2 142 71.8
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 6.1e-52 208.4 146 72.6
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 1.8e-51 206.8 139 73.4
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 1.8e-48 196.8 139 70.5
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 2.3e-43 179.9 137 67.2
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 3.3e-42 176.0 95 81.1
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 9.7e-42 174.5 125 71.2
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 9.1e-40 167.9 226 46.9
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 1.9e-37 160.2 192 43.8
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 2.7e-36 156.4 188 41.5
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 8.8e-35 151.4 252 39.3
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 7.4e-34 148.3 229 44.5
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 1.3e-33 147.5 157 45.9
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 3.7e-33 146.0 168 42.9
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.8e-32 143.7 140 58.6
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 2.2e-30 136.7 139 55.4
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 1.4e-24 117.5 166 36.1
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 1.8e-24 117.1 228 37.3
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 2.5e-21 106.7 91 64.8
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 2.8e-17 93.2 92 57.6
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 2.4e-16 90.1 57 71.9
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 1.0e-11 74.7 182 28.0
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 2.3e-11 73.6 138 25.4
Ah.03g133980 Amaranthus hybridus HOM05D007778 ORTHO05D009819 2.9e-06 56.6 157 32.5


User provided reference genes

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