Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 5.6e-170 600.9 311 100.0
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 1.2e-161 573.2 312 96.5
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 4.3e-29 132.9 338 35.2
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 6.6e-22 109.0 331 33.8
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 8.1e-20 102.1 325 32.9
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.7e-15 87.0 174 37.9
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.7e-15 87.0 174 37.9
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 6.0e-15 85.9 174 38.5
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 6.0e-15 85.9 162 38.3
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 7.9e-15 85.5 182 39.0
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 1.3e-14 84.7 162 38.9
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 3.0e-14 83.6 182 38.5
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 3.0e-14 83.6 161 39.1
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 5.1e-14 82.8 172 37.2
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.9e-13 80.9 170 37.6
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 1.9e-13 80.9 163 38.7
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 2.5e-13 80.5 158 36.7
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 4.3e-13 79.7 169 37.9
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.6e-12 77.8 170 37.1
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 1.6e-12 77.8 161 36.0
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 2.1e-12 77.4 174 35.1
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 2.8e-12 77.0 165 36.4
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 8.1e-12 75.5 148 40.5
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 8.1e-12 75.5 145 37.9
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 8.1e-12 75.5 147 38.8
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.1e-11 75.1 148 39.9
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 1.4e-11 74.7 133 39.1
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 3.1e-11 73.6 164 37.2
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 3.1e-11 73.6 166 35.5
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 5.3e-11 72.8 158 38.6
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 6.9e-11 72.4 172 36.0
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 9.0e-11 72.0 175 36.0
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 1.5e-10 71.2 146 35.6
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 2.0e-10 70.9 173 36.4
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 7.6e-10 68.9 173 34.7
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 1.0e-09 68.6 148 35.1
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 1.3e-09 68.2 123 40.7
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 1.3e-09 68.2 170 34.1
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.3e-09 68.2 148 37.8
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 2.2e-09 67.4 178 37.6
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 2.2e-09 67.4 153 37.9
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 2.2e-09 67.4 154 38.3
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 3.8e-09 66.6 195 33.3
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 3.8e-09 66.6 162 34.6
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 6.5e-09 65.9 166 35.5
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 3.2e-08 63.5 175 31.4
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 4.2e-08 63.2 145 35.9
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 5.5e-08 62.8 174 32.2
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 7.1e-08 62.4 173 32.9
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 7.1e-08 62.4 168 33.9
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 9.3e-08 62.0 173 33.5
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.2e-07 61.6 118 40.7
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 1.6e-07 61.2 163 31.9
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 4.6e-07 59.7 185 34.1
AUR62007292 Chenopodium quinoa HOM05D008113 ORTHO05D009793 4.6e-07 59.7 78 43.6
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 7.9e-07 58.9 137 33.6
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 1.0e-06 58.5 145 35.9
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 3.9e-06 56.6 193 30.1
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 8.7e-06 55.5 175 29.7


User provided reference genes

Program Settings