Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7513 Papaver somniferum HOM05D004805 ORTHO05D005756 1.1e-147 526.6 263 100.0
PSO832G0973 Papaver somniferum HOM05D004805 ORTHO05D005756 8.1e-138 493.8 263 93.2
Nn1g07520 Nelumbo nucifera HOM05D004805 ORTHO05D005756 5.9e-104 381.3 246 73.6
Duzib268G0855 Durio zibethinus HOM05D004805 ORTHO05D005756 1.6e-101 373.2 239 73.2
Psat2g007280 Pisum sativum HOM05D004805 ORTHO05D005756 4.6e-101 371.7 247 70.4
Atru.chr9.1539 Acer truncatum HOM05D004805 ORTHO05D005756 1.4e-100 370.2 240 70.8
TPR.G8592 Trifolium pratense HOM05D004805 ORTHO05D005756 1.4e-100 370.2 247 71.3
Cfa020188 Carpinus fangiana HOM05D004805 ORTHO05D005756 2.3e-100 369.4 245 71.0
Gorai.004G033700 Gossypium raimondii HOM05D004805 ORTHO05D005756 5.1e-100 368.2 243 72.0
Dinv10336 Davidia involucrata HOM05D004805 ORTHO05D005756 1.5e-99 366.7 246 69.9
Atru.chr13.2016 Acer truncatum HOM05D004805 ORTHO05D005756 2.0e-99 366.3 240 70.0
Medtr5g095960 Medicago truncatula HOM05D004805 ORTHO05D005756 2.6e-99 365.9 247 69.6
LjContig00081g0004731 Lotus japonicus HOM05D004805 ORTHO05D005756 9.7e-99 364.0 245 70.6
CiPaw.12G138400 Carya illinoinensis HOM05D004805 ORTHO05D005756 6.3e-98 361.3 250 68.0
Lj1g0004670 Lotus japonicus HOM05D004805 ORTHO05D005756 6.3e-98 361.3 247 69.6
Ca_06397_v3 Cicer arietinum L. HOM05D004805 ORTHO05D005756 8.2e-98 360.9 247 68.8
Haze_09828 Corylus avellana HOM05D004805 ORTHO05D005756 1.1e-97 360.5 245 69.4
Lalb_Chr09g0322761 Lupinus albus HOM05D004805 ORTHO05D005756 2.4e-97 359.4 248 69.4
TAR626G0989 Trochodendron aralioides HOM05D004805 ORTHO05D005756 2.4e-97 359.4 246 69.1
Phvul.008G279200 Phaseolus vulgaris HOM05D004805 ORTHO05D005756 4.1e-97 358.6 246 68.7
Glyma.17G150300 Glycine max HOM05D004805 ORTHO05D005756 9.1e-97 357.5 245 68.2
Aa31LG3G11710 Aethionema arabicum HOM05D004805 ORTHO05D005756 2.0e-96 356.3 234 71.4
Glyma.14G013400 Glycine max HOM05D004805 ORTHO05D005756 2.6e-96 355.9 245 68.2
Ciclev10009329m.g Citrus clementina HOM05D004805 ORTHO05D005756 3.4e-96 355.5 237 69.6
CSS0002120 Camellia sinensis var. sinensis HOM05D004805 ORTHO05D005756 7.7e-96 354.4 246 66.7
arahy.Tifrunner.gnm1.ann1.KL44N8 Arachis hypogaea HOM05D004805 ORTHO05D005756 2.2e-95 352.8 243 68.7
CANSAT11G2385 Cannabis sativa HOM05D004805 ORTHO05D005756 5.0e-95 351.7 242 69.4
Aqoxy4G03118 Aquilegia oxysepala HOM05D004805 ORTHO05D005756 6.5e-95 351.3 247 67.2
Prupe.3G149500 Prunus persica HOM05D004805 ORTHO05D005756 1.1e-94 350.5 240 69.2
GSVIVG01014691001 Vitis vinifera HOM05D004805 ORTHO05D005756 1.1e-94 350.5 246 67.9
arahy.Tifrunner.gnm1.ann1.1A96RS Arachis hypogaea HOM05D004805 ORTHO05D005756 3.2e-94 349.0 241 68.5
CAN.G623.13 Capsicum annuum HOM05D004805 ORTHO05D005756 9.4e-94 347.4 249 66.3
FvH4_3g11630 Fragaria vesca HOM05D004805 ORTHO05D005756 9.4e-94 347.4 241 67.2
Lj1C890G11 Lonicera japonica HOM05D004805 ORTHO05D005756 9.4e-94 347.4 246 68.3
BcaB01g04372 Brassica carinata HOM05D004805 ORTHO05D005756 1.2e-93 347.1 234 69.7
FAN16G0962 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.6e-93 346.7 241 67.2
ClCG10G004450 Citrullus lanatus HOM05D004805 ORTHO05D005756 2.1e-93 346.3 245 65.7
Actinidia30402 Actinidia chinensis HOM05D004805 ORTHO05D005756 2.7e-93 345.9 246 66.3
FAN25G0449 Fragaria x ananassa HOM05D004805 ORTHO05D005756 4.7e-93 345.1 241 67.2
DCAR_013232 Daucus carota HOM05D004805 ORTHO05D005756 6.1e-93 344.7 240 67.5
THA.LOC104811668 Tarenaya hassleriana HOM05D004805 ORTHO05D005756 6.1e-93 344.7 236 70.3
BcaC04g20199 Brassica carinata HOM05D004805 ORTHO05D005756 7.9e-93 344.4 238 68.1
CsaV3_3G004240 Cucumis sativus L. HOM05D004805 ORTHO05D005756 7.9e-93 344.4 245 65.7
RcHm_v2.0_Chr5g0018651 Rosa chinensis HOM05D004805 ORTHO05D005756 1.0e-92 344.0 240 67.1
AL8G31370 Arabidopsis lyrata HOM05D004805 ORTHO05D005756 1.4e-92 343.6 234 70.1
BcaC01g06393 Brassica carinata HOM05D004805 ORTHO05D005756 3.0e-92 342.4 234 68.8
RcHm_v2.0_Chr7g0241681 Rosa chinensis HOM05D004805 ORTHO05D005756 3.9e-92 342.0 240 66.2
AT5G55810 Arabidopsis thaliana HOM05D004805 ORTHO05D005756 6.7e-92 341.3 234 70.1
Carub.0008s1616 Capsella rubella HOM05D004805 ORTHO05D005756 8.8e-92 340.9 235 70.2
Carub.0005s0937 Capsella rubella HOM05D004805 ORTHO05D005756 1.1e-91 340.5 234 70.9
Carub.0005s0950 Capsella rubella HOM05D004805 ORTHO05D005756 1.1e-91 340.5 234 70.9
CARHR269130 Cardamine hirsuta HOM05D004805 ORTHO05D005756 1.1e-91 340.5 234 68.8
ECA234G3028 Erigeron canadensis HOM05D004805 ORTHO05D005756 1.1e-91 340.5 246 66.7
MD05G1261800 Malus domestica HOM05D004805 ORTHO05D005756 1.1e-91 340.5 240 65.8
Cc00_g18290 Coffea canephora HOM05D004805 ORTHO05D005756 1.5e-91 340.1 239 68.2
Sp6g17690 Schrenkiella parvula HOM05D004805 ORTHO05D005756 1.5e-91 340.1 234 68.4
Lsat_1_v5_gn_9_89740 Lactuca sativa HOM05D004805 ORTHO05D005756 2.6e-91 339.3 249 64.7
Rhsim06G0229900 Rhododendron simsii HOM05D004805 ORTHO05D005756 2.6e-91 339.3 248 64.5
Peaxi162Scf00139g01316 Petunia axillaris HOM05D004805 ORTHO05D005756 4.4e-91 338.6 242 67.8
Solyc07g065590.4 Solanum lycopersicum HOM05D004805 ORTHO05D005756 4.4e-91 338.6 243 66.7
Sopen07g033800 Solanum pennellii HOM05D004805 ORTHO05D005756 5.7e-91 338.2 242 66.1
BcaB08g35939 Brassica carinata HOM05D004805 ORTHO05D005756 1.3e-90 337.0 242 66.1
HanXRQChr03g0074031 Helianthus annuus HOM05D004805 ORTHO05D005756 1.3e-90 337.0 240 66.2
PGR142G3095 Punica granatum HOM05D004805 ORTHO05D005756 2.2e-90 336.3 242 65.7
Actinidia05003 Actinidia chinensis HOM05D004805 ORTHO05D005756 4.8e-90 335.1 246 63.4
Gohir.D08G035700 Gossypium hirsutum HOM05D004805 ORTHO05D005756 4.1e-89 332.0 243 66.7
Eucgr.F03688 Eucalyptus grandis HOM05D004805 ORTHO05D005756 5.3e-89 331.6 238 66.4
Sed0016007 Sechium edule HOM05D004805 ORTHO05D005756 5.3e-89 331.6 245 62.4
PGSC0003DMG400022170 Solanum tuberosum HOM05D004805 ORTHO05D005756 7.0e-89 331.3 223 68.6
MELO3C014119.2 Cucumis melo HOM05D004805 ORTHO05D005756 2.0e-88 329.7 282 57.8
Gohir.A08G025200 Gossypium hirsutum HOM05D004805 ORTHO05D005756 3.5e-88 328.9 243 65.8
Manes.03G141600 Manihot esculenta HOM05D004805 ORTHO05D005756 3.5e-88 328.9 245 64.1
SGA_v2.0_scaffold44G16806 Striga asiatica HOM05D001081 ORTHO05D003320 1.9e-86 323.2 245 64.5
SalBow4G0417 Salvia bowleyana HOM05D004805 ORTHO05D005756 3.2e-86 322.4 267 59.6
Duzib213G0036 Durio zibethinus HOM05D004805 ORTHO05D005756 7.2e-86 321.2 239 64.0
ATR0090G032 Amborella trichopoda HOM05D004805 ORTHO05D005756 3.6e-85 318.9 217 70.5
HPP92_025829 Vanilla planifolia HOM05D004805 ORTHO05D005756 1.0e-84 317.4 244 63.9
MSTRG.27026 Avicennia marina HOM05D004805 ORTHO05D005756 1.4e-84 317.0 249 61.0
Potri.013G021900 Populus trichocarpa HOM05D004805 ORTHO05D005756 2.3e-84 316.2 239 63.6
EL10Ac1g00341 Beta vulgaris HOM05D004805 ORTHO05D005756 6.7e-84 314.7 245 62.4
QL08p004083 Quercus lobata HOM05D004805 ORTHO05D005756 1.2e-83 313.9 204 71.1
Potri.005G032300 Populus trichocarpa HOM05D004805 ORTHO05D005756 2.6e-83 312.8 241 62.2
TWI38G2348 Tripterygium wilfordii HOM05D004805 ORTHO05D005756 4.4e-83 312.0 206 69.9
Sabra05G0034900 Salix brachista HOM05D004805 ORTHO05D005756 3.7e-82 308.9 241 61.0
Zm00001eb191530 Zea mays HOM05D004805 ORTHO05D005756 3.7e-82 308.9 240 60.8
MD10G1240100 Malus domestica HOM05D004805 ORTHO05D005756 4.1e-81 305.4 202 68.8
VMungo0647G2576 Vigna mungo HOM05D004805 ORTHO05D005756 4.5e-80 302.0 201 70.1
A03p13810 Brassica napus HOM05D004805 ORTHO05D005756 7.7e-80 301.2 207 66.7
C03p16250 Brassica napus HOM05D004805 ORTHO05D005756 7.7e-80 301.2 207 67.6
BolC9t57526H Brassica oleracea HOM05D004805 ORTHO05D005756 2.2e-79 299.7 208 67.8
C09p46750 Brassica napus HOM05D004805 ORTHO05D005756 3.8e-79 298.9 208 67.8
Nitab4.5_0002736g0040 Nicotiana tabacum HOM05D004805 ORTHO05D005756 1.1e-78 297.4 198 67.7
A10p13030 Brassica napus HOM05D004805 ORTHO05D005756 2.5e-78 296.2 208 67.8
Hma1.2p1_1402F.1_g281100 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 5.5e-78 295.0 216 65.3
Nitab4.5_0007415g0050 Nicotiana tabacum HOM05D004805 ORTHO05D005756 9.4e-78 294.3 209 65.6
BraA10t43397Z Brassica rapa HOM05D004805 ORTHO05D005756 1.2e-77 293.9 208 66.8
Medtr3g007850 Medicago truncatula HOM05D004805 ORTHO05D005756 4.7e-77 292.0 193 71.0
Hund27237 Selenicereus undatus HOM05D004805 ORTHO05D005756 1.0e-76 290.8 265 57.0
vmacro11591 Vaccinium macrocarpon HOM05D004805 ORTHO05D005756 8.8e-76 287.7 258 55.8
AUR62022629 Chenopodium quinoa HOM05D004805 ORTHO05D005756 3.4e-75 285.8 235 61.3
Sc16g0008090 Simmondsia chinensis HOM05D004805 ORTHO05D005756 7.0e-73 278.1 245 57.6
Thecc.07G013300 Theobroma cacao HOM05D004805 ORTHO05D005756 2.7e-72 276.2 177 70.1
Mapoly0011s0011 Marchantia polymorpha HOM05D004805 ORTHO05D005756 3.2e-70 269.2 238 54.6
Lsat_1_v5_gn_4_137701 Lactuca sativa HOM05D004805 ORTHO05D005756 5.5e-70 268.5 188 67.6
Pp3c10_25720 Physcomitrium patens HOM05D004805 ORTHO05D005756 2.1e-69 266.5 241 53.9
Pp3c20_23380 Physcomitrium patens HOM05D004805 ORTHO05D005756 4.0e-68 262.3 244 53.3
AagrBONN_evm.TU.Sc2ySwM_362.484 Anthoceros agrestis HOM05D004805 ORTHO05D005756 3.7e-66 255.8 239 51.5
Pp3c3_17230 Physcomitrium patens HOM05D004805 ORTHO05D005756 3.7e-66 255.8 238 52.1
AUR62004423 Chenopodium quinoa HOM05D004805 ORTHO05D005756 3.1e-65 252.7 165 70.9
SGA_v2.0_scaffold192G40544 Striga asiatica HOM05D001081 ORTHO05D003320 7.0e-65 251.5 232 56.9
CAN.G849.12 Capsicum annuum HOM05D004805 ORTHO05D005756 4.5e-64 248.8 190 61.6
Prupe.4G103800 Prunus persica HOM05D004805 ORTHO05D005756 4.5e-64 248.8 240 54.2
Pp3c13_13680 Physcomitrium patens HOM05D004805 ORTHO05D005756 2.8e-61 239.6 239 50.6
Migut.F01027 Erythranthe guttata HOM05D004805 ORTHO05D005756 3.6e-61 239.2 242 52.9
CARHR269180 Cardamine hirsuta HOM05D004805 ORTHO05D005756 5.2e-60 235.3 163 66.9
Hma1.2p1_1516F.1_g288260 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 1.2e-59 234.2 200 58.5
AagrBONN_evm.TU.Sc2ySwM_228.3487 Anthoceros agrestis HOM05D004805 ORTHO05D005756 2.0e-59 233.4 233 48.9
FAN21G3052 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.4e-57 227.3 186 61.3
BraA03t10684Z Brassica rapa HOM05D004805 ORTHO05D005756 9.2e-57 224.6 218 53.2
AagrBONN_evm.TU.Sc2ySwM_344.1047 Anthoceros agrestis HOM05D004805 ORTHO05D005756 1.7e-55 220.3 218 50.0
CBR_g34363 Chara braunii HOM05D000019 ORTHO05D000002 3.0e-55 219.5 213 50.2
Lj3g0007860 Lotus japonicus HOM05D004805 ORTHO05D005756 3.0e-55 219.5 244 52.5
TAR624G1110 Trochodendron aralioides HOM05D004805 ORTHO05D005756 4.3e-54 215.7 196 56.6
Glyma.19G097900 Glycine max HOM05D004805 ORTHO05D005756 2.8e-53 213.0 144 66.0
Ah.05g180060 Amaranthus hybridus HOM05D004805 ORTHO05D005756 3.6e-53 212.6 172 61.0
SMO364G0361 Selaginella moellendorffii HOM05D004805 ORTHO05D005756 3.6e-53 212.6 214 46.7
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 6.8e-52 208.4 172 59.3
Rhsim04G0012600 Rhododendron simsii HOM05D004805 ORTHO05D005756 4.4e-51 205.7 180 55.0
BolC3t14047H Brassica oleracea HOM05D004805 ORTHO05D005756 2.2e-50 203.4 228 48.7
AagrBONN_evm.TU.Sc2ySwM_344.1045 Anthoceros agrestis HOM05D004805 ORTHO05D005756 3.2e-49 199.5 199 49.2
COL.COLO4_09836 Corchorus olitorius HOM05D004805 ORTHO05D005756 3.0e-47 193.0 129 74.4
Os02g0814900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 3.9e-47 192.6 186 51.6
Thhalv10015421m.g Eutrema salsugineum HOM05D004805 ORTHO05D005756 1.1e-46 191.0 192 52.1
Cpa.g.sc26.30 Carica papaya HOM05D004805 ORTHO05D005756 6.4e-42 175.3 111 71.2
PRCOL_00003123 Prasinoderma coloniale HOM05D004805 ORTHO05D005756 3.3e-38 162.9 231 41.1
Os09g0347900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 3.6e-37 159.5 105 67.6
ECA240G4670 Erigeron canadensis HOM05D004805 ORTHO05D005756 1.1e-36 157.9 105 68.6
PSO170G0902 Papaver somniferum HOM05D004805 ORTHO05D005756 4.4e-35 152.5 100 74.0
unitig_0.g252 Utricularia gibba HOM05D004805 ORTHO05D005756 4.9e-34 149.1 114 57.9
Glyma.02G300600 Glycine max HOM05D004805 ORTHO05D005756 7.1e-33 145.2 105 63.8
QL08p004070 Quercus lobata HOM05D000031 ORTHO05D005756 4.6e-32 142.5 215 40.9
Hma1.2p1_0226F.1_g095340 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 1.6e-29 134.0 160 46.9
Cfa025186 Carpinus fangiana HOM05D004805 ORTHO05D005756 5.6e-22 109.0 203 33.5
SEGI_22417 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 1.5e-19 100.9 99 47.5
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 3.0e-15 86.7 67 64.2
Oeu037059.1 Olea europaea HOM05D004805 ORTHO05D005756 1.1e-14 84.7 65 66.2
FAN24G2452 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.6e-13 80.9 55 65.5
SEGI_01519 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 1.1e-12 78.2 69 58.0
CBR_g34381 Chara braunii HOM05D000019 ORTHO05D000048 4.0e-12 76.3 81 44.4
FAN16G1285 Fragaria x ananassa HOM05D004805 ORTHO05D005756 2.4e-09 67.0 46 67.4
Cre14.g626950 Chlamydomonas reinhardtii HOM05D004805 ORTHO05D005756 4.2e-09 66.2 107 32.7
SEGI_37983 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 1.1e-06 58.2 82 37.8


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