Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7482 Papaver somniferum HOM05D007122 ORTHO05D008918 5.6e-95 350.9 174 100.0
PSO782G5442 Papaver somniferum HOM05D007122 ORTHO05D008918 7.4e-71 270.8 149 94.6
Potri.002G183700 Populus trichocarpa HOM05D007122 ORTHO05D008918 1.2e-60 236.9 154 78.6
QL05p084392 Quercus lobata HOM05D007122 ORTHO05D008918 2.0e-60 236.1 144 77.8
MBI12_g33188_MAGBIO Magnolia biondii HOM05D007122 ORTHO05D008918 2.6e-60 235.7 144 79.2
MD17G1162500 Malus domestica HOM05D007122 ORTHO05D008918 4.5e-60 235.0 144 80.6
Prupe.3G022800 Prunus persica HOM05D007122 ORTHO05D008918 5.9e-60 234.6 144 80.6
TAR629G1569 Trochodendron aralioides HOM05D007122 ORTHO05D008918 5.9e-60 234.6 151 76.2
Sp4g28930 Schrenkiella parvula HOM05D007122 ORTHO05D008918 1.7e-59 233.0 153 75.2
Thhalv10001577m.g Eutrema salsugineum HOM05D007122 ORTHO05D008918 2.2e-59 232.6 153 75.2
FvH4_6g36990 Fragaria vesca HOM05D007122 ORTHO05D008918 2.2e-59 232.6 146 77.4
FAN14G1589 Fragaria x ananassa HOM05D007122 ORTHO05D008918 2.9e-59 232.3 146 76.7
FAN05G3936 Fragaria x ananassa HOM05D007122 ORTHO05D008918 8.5e-59 230.7 146 77.4
AT2G46910 Arabidopsis thaliana HOM05D007122 ORTHO05D008918 1.4e-58 229.9 150 74.7
MSTRG.12208 Avicennia marina HOM05D007122 ORTHO05D008918 1.4e-58 229.9 146 78.8
CiPaw.01G090900 Carya illinoinensis HOM05D007122 ORTHO05D008918 1.4e-58 229.9 144 77.1
TWI59G0863 Tripterygium wilfordii HOM05D007122 ORTHO05D008918 1.4e-58 229.9 146 77.4
CARHR142260 Cardamine hirsuta HOM05D007122 ORTHO05D008918 1.9e-58 229.6 153 73.9
Glyma.07G002100 Glycine max HOM05D007122 ORTHO05D008918 1.9e-58 229.6 143 77.6
RcHm_v2.0_Chr2g0149531 Rosa chinensis HOM05D007122 ORTHO05D008918 1.9e-58 229.6 146 78.1
Cpa.g.sc57.60 Carica papaya HOM05D007122 ORTHO05D008918 2.5e-58 229.2 150 77.3
Carub.0004s2963 Capsella rubella HOM05D007122 ORTHO05D008918 3.2e-58 228.8 150 74.0
A05p00930 Brassica napus HOM05D007122 ORTHO05D008918 7.2e-58 227.6 153 72.5
Phvul.010G164100 Phaseolus vulgaris HOM05D007122 ORTHO05D008918 7.2e-58 227.6 143 76.2
Atru.chr5.816 Acer truncatum HOM05D007122 ORTHO05D008918 9.4e-58 227.3 150 75.3
BcaC02g12634 Brassica carinata HOM05D007122 ORTHO05D008918 1.6e-57 226.5 153 71.9
CANSAT01G1971 Cannabis sativa HOM05D007122 ORTHO05D008918 1.6e-57 226.5 151 74.8
ClCG07G014660 Citrullus lanatus HOM05D007122 ORTHO05D008918 1.6e-57 226.5 145 78.6
Gohir.D11G107500 Gossypium hirsutum HOM05D007122 ORTHO05D008918 3.6e-57 225.3 150 77.3
Thecc.01G329100 Theobroma cacao HOM05D007122 ORTHO05D008918 3.6e-57 225.3 150 77.3
Gorai.007G115100 Gossypium raimondii HOM05D007122 ORTHO05D008918 6.1e-57 224.6 155 75.5
Hma1.2p1_0074F.1_g038925 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 6.1e-57 224.6 146 76.7
BraA05t19094Z Brassica rapa HOM05D007122 ORTHO05D008918 7.9e-57 224.2 147 73.5
Aa31LG1G28270 Aethionema arabicum HOM05D007122 ORTHO05D008918 1.4e-56 223.4 150 74.7
COL.COLO4_23084 Corchorus olitorius HOM05D007122 ORTHO05D008918 1.4e-56 223.4 150 77.3
Lj3g0016159 Lotus japonicus HOM05D007122 ORTHO05D008918 1.4e-56 223.4 143 74.8
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 1.8e-56 223.0 147 73.5
Cc02_g30330 Coffea canephora HOM05D007122 ORTHO05D008918 1.8e-56 223.0 148 73.6
CsaV3_3G030490 Cucumis sativus L. HOM05D007122 ORTHO05D008918 1.8e-56 223.0 145 78.6
THA.LOC104802109 Tarenaya hassleriana HOM05D007122 ORTHO05D008918 2.3e-56 222.6 146 74.7
Os10g0509200 Oryza sativa ssp. japonica HOM05D007122 ORTHO05D008918 3.0e-56 222.2 143 74.1
Oeu050289.1 Olea europaea HOM05D007122 ORTHO05D008918 5.1e-56 221.5 139 78.4
Sed0017612 Sechium edule HOM05D007122 ORTHO05D008918 5.1e-56 221.5 157 72.6
EL10Ac5g10570 Beta vulgaris HOM05D007122 ORTHO05D008918 6.7e-56 221.1 151 71.5
Ciclev10021604m.g Citrus clementina HOM05D007122 ORTHO05D008918 6.7e-56 221.1 150 73.3
Peaxi162Scf00822g00313 Petunia axillaris HOM05D007122 ORTHO05D008918 6.7e-56 221.1 142 76.1
Ca_20970_v3 Cicer arietinum L. HOM05D007122 ORTHO05D008918 1.1e-55 220.3 143 74.1
MELO3C026712.2 Cucumis melo HOM05D007122 ORTHO05D008918 1.5e-55 219.9 145 77.2
Zm00001eb220590 Zea mays HOM05D007122 ORTHO05D008918 1.5e-55 219.9 141 74.5
AUR62028625 Chenopodium quinoa HOM05D007122 ORTHO05D008918 2.0e-55 219.5 145 74.5
GSVIVG01027487001 Vitis vinifera HOM05D007122 ORTHO05D008918 2.0e-55 219.5 149 74.5
arahy.Tifrunner.gnm1.ann1.KLKB5C Arachis hypogaea HOM05D007122 ORTHO05D008918 7.4e-55 217.6 143 74.1
CAN.G21.48 Capsicum annuum HOM05D007122 ORTHO05D008918 7.4e-55 217.6 148 72.3
CDE02G4652 Ceratophyllum demersum HOM05D007122 ORTHO05D008918 1.3e-54 216.9 146 73.3
Lalb_Chr04g0264851 Lupinus albus HOM05D007122 ORTHO05D008918 1.3e-54 216.9 155 69.0
Nn1g00501 Nelumbo nucifera HOM05D007122 ORTHO05D008918 1.3e-54 216.9 143 74.8
arahy.Tifrunner.gnm1.ann1.XK7RJX Arachis hypogaea HOM05D007122 ORTHO05D008918 2.2e-54 216.1 143 74.1
HanXRQChr16g0524441 Helianthus annuus HOM05D007122 ORTHO05D008918 2.8e-54 215.7 148 74.3
AUR62008050 Chenopodium quinoa HOM05D007122 ORTHO05D008918 3.7e-54 215.3 145 73.1
TPR.G38811 Trifolium pratense HOM05D007122 ORTHO05D008918 4.8e-54 214.9 144 74.3
Medtr4g005390 Medicago truncatula HOM05D007122 ORTHO05D008918 8.2e-54 214.2 143 72.0
Sopen08g022350 Solanum pennellii HOM05D007122 ORTHO05D008918 1.1e-53 213.8 146 70.5
Eucgr.E00013 Eucalyptus grandis HOM05D007122 ORTHO05D008918 2.4e-53 212.6 144 71.5
Actinidia33027 Actinidia chinensis HOM05D007122 ORTHO05D008918 3.1e-53 212.2 143 74.1
ATR0579G047 Amborella trichopoda HOM05D007122 ORTHO05D008918 3.1e-53 212.2 145 69.7
Nitab4.5_0006202g0020 Nicotiana tabacum HOM05D007122 ORTHO05D008918 6.9e-53 211.1 143 74.1
Solyc08g068590.4 Solanum lycopersicum HOM05D007122 ORTHO05D008918 6.9e-53 211.1 146 69.2
Lj9A610T61 Lonicera japonica HOM05D007122 ORTHO05D008918 1.5e-52 209.9 144 76.4
Gohir.A11G103000 Gossypium hirsutum HOM05D007122 ORTHO05D008918 2.0e-52 209.5 150 74.7
Sabra02G0131900 Salix brachista HOM05D007122 ORTHO05D008918 7.7e-52 207.6 208 56.2
HPP92_007409 Vanilla planifolia HOM05D007122 ORTHO05D008918 7.7e-52 207.6 143 69.9
ECA234G3018 Erigeron canadensis HOM05D007122 ORTHO05D008918 1.7e-51 206.5 142 74.6
FAN02G0509 Fragaria x ananassa HOM05D007122 ORTHO05D008918 5.0e-51 204.9 206 55.3
Hund02816 Selenicereus undatus HOM05D007122 ORTHO05D008918 8.5e-51 204.1 145 71.7
unitig_0.g1006 Utricularia gibba HOM05D007122 ORTHO05D003998 1.6e-49 199.9 138 66.7
PGSC0003DMG400029047 Solanum tuberosum HOM05D007122 ORTHO05D008918 3.6e-49 198.7 176 58.0
vmacro08515 Vaccinium macrocarpon HOM05D007122 ORTHO05D008918 2.3e-48 196.1 154 66.9
Rhsim04G0175900 Rhododendron simsii HOM05D007122 ORTHO05D008918 1.2e-44 183.7 163 59.5
SMO232G0083 Selaginella moellendorffii HOM05D007122 ORTHO05D008918 3.6e-41 172.2 152 59.2
VMungo0331G0463 Vigna mungo HOM05D000070 ORTHO05D003491 8.0e-41 171.0 109 76.1
Manes.01G237100 Manihot esculenta HOM05D007122 ORTHO05D008918 4.0e-40 168.7 104 79.8
Mapoly0069s0014 Marchantia polymorpha HOM05D007122 ORTHO05D008918 3.7e-38 162.2 148 56.8
Aqoxy5G04392 Aquilegia oxysepala HOM05D007122 ORTHO05D008918 8.2e-38 161.0 124 71.0
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 5.3e-37 158.3 115 67.0
PGR042G2951 Punica granatum HOM05D007122 ORTHO05D008918 5.3e-37 158.3 113 69.0
Pp3c11_15290 Physcomitrium patens HOM05D007122 ORTHO05D008918 2.0e-36 156.4 151 50.3
Dinv25395 Davidia involucrata HOM05D007122 ORTHO05D008918 2.9e-35 152.5 146 56.8
Lsat_1_v5_gn_4_31280 Lactuca sativa HOM05D007122 ORTHO05D008918 2.9e-35 152.5 113 69.9
Glyma.08G224600 Glycine max HOM05D007122 ORTHO05D008918 3.8e-35 152.1 100 76.0
Ah.11g050690 Amaranthus hybridus HOM05D007122 ORTHO05D008918 8.5e-35 151.0 143 55.9
SGA_v2.0_scaffold104G30244 Striga asiatica HOM05D007122 ORTHO05D008918 8.3e-30 134.4 149 52.3
Haze_16258 Corylus avellana HOM05D007122 ORTHO05D008918 7.0e-29 131.3 83 77.1
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.2e-28 130.6 90 70.0
Psat7g265400 Pisum sativum HOM05D007122 ORTHO05D008918 3.0e-24 115.9 84 67.9
Duzib133G0914 Durio zibethinus HOM05D007122 ORTHO05D008918 3.1e-21 105.9 111 53.2
Glyma.14G134000 Glycine max HOM05D007122 ORTHO05D008918 2.0e-20 103.2 85 62.4
Dinv32665 Davidia involucrata HOM05D007122 ORTHO05D008918 3.8e-19 99.0 61 75.4
Hma1.2p1_0074F.1_g038930 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 3.3e-18 95.9 59 74.6
Sc05g0001590 Simmondsia chinensis HOM05D007122 ORTHO05D008918 1.0e-16 90.9 98 53.1
Migut.N02127 Erythranthe guttata HOM05D007122 ORTHO05D008918 7.5e-15 84.7 62 71.0
Cre01.g039550 Chlamydomonas reinhardtii HOM05D007122 ORTHO05D008918 1.8e-13 80.1 156 34.0
Zm00001eb094490 Zea mays HOM05D007122 ORTHO05D008918 5.4e-13 78.6 49 71.4
MCO07G119 Micromonas commoda HOM05D007122 ORTHO05D008918 1.3e-11 73.9 165 31.5
FAN05G3242 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.9e-10 70.1 37 86.5
FAN14G0283 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.9e-10 70.1 37 86.5
FvH4_6g35960 Fragaria vesca HOM05D007122 ORTHO05D008918 9.5e-10 67.8 37 83.8
Pp3c2_10460 Physcomitrium patens HOM05D007122 ORTHO05D008918 1.2e-07 60.8 65 41.5
QL05p083819 Quercus lobata HOM05D007122 ORTHO05D008918 1.3e-06 57.4 40 67.5


User provided reference genes

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