Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 1.4e-133 479.6 236 100.0
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 2.5e-122 442.2 227 96.9
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 3.1e-72 275.8 229 62.9
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 1.7e-70 270.0 228 62.3
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 1.4e-64 250.4 231 59.7
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 5.3e-64 248.4 231 59.7
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 2.6e-63 246.1 233 58.4
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 2.6e-63 246.1 233 58.4
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 3.5e-63 245.7 233 57.1
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 2.2e-62 243.0 242 57.0
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 3.8e-62 242.3 226 58.8
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 5.0e-62 241.9 236 56.8
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 5.0e-62 241.9 240 56.7
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 8.5e-62 241.1 234 57.7
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 8.5e-62 241.1 234 57.7
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 1.5e-61 240.4 232 54.7
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 1.9e-61 240.0 236 55.9
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 3.2e-61 239.2 241 55.6
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 7.2e-61 238.0 230 58.3
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 7.2e-61 238.0 237 54.0
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 1.6e-60 236.9 226 56.2
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 1.6e-60 236.9 235 56.2
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 3.6e-60 235.7 187 63.6
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 3.6e-60 235.7 229 57.2
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 3.6e-60 235.7 238 55.0
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 1.0e-59 234.2 170 66.5
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.0e-59 234.2 252 52.8
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 1.4e-59 233.8 172 66.9
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 1.4e-59 233.8 156 73.1
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 1.8e-59 233.4 237 54.4
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 2.3e-59 233.0 177 63.3
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 2.3e-59 233.0 180 64.4
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 4.0e-59 232.3 153 71.9
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 4.0e-59 232.3 232 55.6
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 5.2e-59 231.9 154 72.1
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 5.2e-59 231.9 204 59.8
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 5.2e-59 231.9 148 71.6
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 5.2e-59 231.9 192 62.5
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 6.7e-59 231.5 198 59.1
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 8.8e-59 231.1 161 70.8
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 8.8e-59 231.1 177 64.4
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 8.8e-59 231.1 169 68.0
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 1.1e-58 230.7 238 56.3
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 1.5e-58 230.3 135 79.3
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 2.0e-58 229.9 166 68.1
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 2.0e-58 229.9 155 71.0
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 2.6e-58 229.6 194 61.3
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 2.6e-58 229.6 209 55.0
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 3.3e-58 229.2 167 68.9
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 4.4e-58 228.8 227 54.6
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 4.4e-58 228.8 216 56.5
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 5.7e-58 228.4 227 55.5
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 5.7e-58 228.4 153 71.2
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 7.5e-58 228.0 174 66.1
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 7.5e-58 228.0 236 52.5
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 9.7e-58 227.6 226 55.8
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 9.7e-58 227.6 229 55.0
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 1.3e-57 227.3 177 62.7
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 1.7e-57 226.9 155 68.4
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 1.7e-57 226.9 170 65.3
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 1.7e-57 226.9 156 69.9
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 2.2e-57 226.5 208 58.2
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 2.2e-57 226.5 163 66.9
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 2.8e-57 226.1 170 63.5
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 3.7e-57 225.7 147 69.4
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 6.3e-57 224.9 160 68.1
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 6.3e-57 224.9 226 56.6
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 8.2e-57 224.6 187 61.0
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 1.1e-56 224.2 165 64.8
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 1.1e-56 224.2 187 60.4
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 1.1e-56 224.2 226 53.1
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 1.4e-56 223.8 154 68.8
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 1.8e-56 223.4 155 67.7
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 1.8e-56 223.4 187 60.4
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 4.1e-56 222.2 232 54.3
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 7.0e-56 221.5 170 61.8
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 7.0e-56 221.5 170 61.8
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 7.0e-56 221.5 170 61.8
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 7.0e-56 221.5 154 68.2
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 9.1e-56 221.1 205 56.1
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 9.1e-56 221.1 154 69.5
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 1.6e-55 220.3 155 65.8
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 2.0e-55 219.9 190 60.0
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 2.6e-55 219.5 170 60.6
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 5.9e-55 218.4 183 60.7
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 5.9e-55 218.4 158 65.2
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 7.7e-55 218.0 170 60.6
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 2.2e-54 216.5 217 54.4
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 3.8e-54 215.7 140 70.0
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 5.0e-54 215.3 218 56.4
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 5.0e-54 215.3 229 55.0
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 6.5e-54 214.9 231 52.8
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 7.2e-53 211.5 214 56.1
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 1.2e-52 210.7 125 76.8
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 2.7e-52 209.5 198 57.1
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 2.3e-51 206.5 149 68.5
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 8.8e-51 204.5 153 64.1
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 1.2e-50 204.1 171 60.8
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.4e-48 197.2 178 57.9
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 1.4e-48 197.2 163 60.7
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 9.1e-48 194.5 198 53.5
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 1.7e-46 190.3 144 62.5
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 8.0e-44 181.4 126 69.0
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 1.0e-43 181.0 191 53.9
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 8.3e-41 171.4 153 48.4
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 5.9e-39 165.2 111 64.9
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 1.2e-36 157.5 107 67.3
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 3.6e-36 156.0 182 47.8
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 3.4e-34 149.4 170 51.2
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 3.4e-34 149.4 170 51.2
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 1.7e-33 147.1 94 74.5
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 1.8e-32 143.7 138 49.3
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 4.1e-32 142.5 134 50.7
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 3.5e-31 139.4 128 49.2
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 2.3e-27 126.7 81 74.1
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 1.3e-25 120.9 78 70.5
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 6.4e-25 118.6 80 70.0
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 8.3e-25 118.2 157 49.0
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 7.0e-24 115.2 150 46.0
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 4.6e-23 112.5 151 44.4
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 1.1e-21 107.8 124 51.6
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 2.6e-18 96.7 142 37.3
PRCOL_00004884 Prasinoderma coloniale HOM05D006272 ORTHO05D030206 1.9e-08 63.9 144 29.2
Cre03.g208049 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D139805 2.1e-07 60.5 80 38.8


User provided reference genes

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